List of clones in pair P003342.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016D13Sequence616005144 (13)gb|AEA50874.1|1e-28lhy1 [Populus tremula]786008198 (5)dbj|BAK19069.1|8e-92late elongated hypocotyl homolog [Ipomoea nil]
JMFS001H03Sequence514005144 (13)ref|XP_007139035.1|1e-41hypothetical protein PHAVU_009G259600g [Phaseolus vulgaris] ref|XP_007139036.1|
JMFS041B10Sequence571008198 (5)dbj|BAK19069.1|2e-70late elongated hypocotyl homolog [Ipomoea nil]
JMFS069H10Sequence621005144 (13)gb|AEA50874.1|1e-35lhy1 [Populus tremula]
JMFS078A09Sequence617008198 (5)dbj|BAK19069.1|5e-68late elongated hypocotyl homolog [Ipomoea nil]
JMFS080C02Sequence617005144 (13)ref|XP_007139035.1|1e-29hypothetical protein PHAVU_009G259600g [Phaseolus vulgaris] ref|XP_007139036.1|
JMFS085C07Sequence601005144 (13)gb|AEA50874.1|2e-32lhy1 [Populus tremula]
JMFS097F08Sequence545008198 (5)dbj|BAK19069.1|2e-70late elongated hypocotyl homolog [Ipomoea nil]
JMFS115D02Sequence563005144 (13)gb|AEA50874.1|1e-24lhy1 [Populus tremula]
JMFS141A07Sequence293005144 (13)
JMFS144A12Sequence624005144 (13)gb|AEA50874.1|2e-40lhy1 [Populus tremula]
JMFS144F01Sequence602005144 (13)gb|AEA50874.1|5e-40lhy1 [Populus tremula]
JMFS147A03Sequence644005144 (13)gb|AEA50874.1|7e-40lhy1 [Populus tremula]
JMFS151A01Sequence620005144 (13)gb|AEA50874.1|6e-40lhy1 [Populus tremula]
JMFS167F07Sequence619005144 (13)gb|AEA50874.1|6e-42lhy1 [Populus tremula]
JMSF029M05Sequence641005144 (13)ref|XP_007139035.1|9e-24hypothetical protein PHAVU_009G259600g [Phaseolus vulgaris] ref|XP_007139036.1| 645008198 (5)dbj|BAK19069.1|4e-74late elongated hypocotyl homolog [Ipomoea nil]

Contig 5144 BLAST Hits against nr-aa DB Show

Contig 8198 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig005144============================================ 735         ============================================Contig008198============================================ 872
 127 -------------------------------------------------------------------------------------->JMSF029M05                            <-------------------------------------------------------------------------rJMSF029M05  
 130       ----------------------------------------------------------------------------------->JMFF016D13             <-----------------------------------------------------------------------------------------rJMFF016D13  
               --------------------------------------->JMFS141A07-                                                    
             -------------------------------------------------------------------------------------->JMFS147A03-       
                  ---------------------------------------------------------------------------------->JMFS167F07-      
               --------------------------------------------------------------------------------->JMFS085C07-          
                                   --------------------------------------------------------------------->JMFS001H03-  
                ----------------------------------------------------------------------------------->JMFS151A01-       
              ------------------------------------------------------------------------------------>JMFS069H10-        
            ----------------------------------------------------------------------------------->JMFS080C02-           
                ------------------------------------------------------------------------------------>JMFS144A12-      
                ---------------------------------------------------------------------------->JMFS115D02-              
                   --------------------------------------------------------------------------------->JMFS144F01-      
                                                                                                                                                   ---------------------------------------------------------------------->JMFS078A09-  
                                                                                                                                                   ---------------------------------------------------------------->JMFS041B10-  
                                                                                                                                                   ------------------------------------------------------------>JMFS097F08-