List of clones in pair P001673.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012H17Sequence548001979 (9)752001484 (4)
JMFS007A09Sequence621001979 (9)ref|XP_004299699.1|5e-08PREDICTED: transport inhibitor response 1-like protein [Fragaria vesca subsp. v
JMFS009D10Sequence579001979 (9)ref|XP_006338135.1|5e-04PREDICTED: transport inhibitor response 1-like protein-like, partial [Solanum t
JMFS072D07Sequence642001979 (9)ref|NP_001234722.1|6e-25LeTIR [Solanum lycopersicum] gb|ACY26209.1| LeTIR [Solanum lycopersicum]
JMFS119C05Sequence624001979 (9)ref|XP_004299699.1|2e-11PREDICTED: transport inhibitor response 1-like protein [Fragaria vesca subsp. v
JMFS124C03Sequence565001979 (9)
JMFS143A03Sequence624001979 (9)ref|XP_004299699.1|4e-14PREDICTED: transport inhibitor response 1-like protein [Fragaria vesca subsp. v
JMSF008C24Sequence392001979 (9)778001484 (4)
JMSF020B11Sequence691001979 (9)ref|XP_006338135.1|1e-20PREDICTED: transport inhibitor response 1-like protein-like, partial [Solanum t798001484 (4)

Contig 1979 BLAST Hits against nr-aa DB Show

Contig 1484 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig001979============================================ 714         ============================================Contig001484============================================ 863
  32  --------------------------------------------------------------------------->JMFF012H17                                    <--------------------------------------------------------------------------------------rJMFF012H17  
  47  ----------------------------------------------------------------------------------------------->JMSF020B11         <--------------------------------------------------------------------------------------------rJMSF020B11  
  96  ----------------------------------------------------->JMSF008C24                                                <-----------------------------------------------------------------------------------------rJMSF008C24  
               ----------------------------------------------------------------------------------------->JMFS072D07-  
         -------------------------------------------------------------------------------------->JMFS119C05-           
       -------------------------------------------------------------------------------------->JMFS007A09-             
          -------------------------------------------------------------------------------->JMFS009D10-                
     ------------------------------------------------------------------------------>JMFS124C03-                       
           -------------------------------------------------------------------------------------->JMFS143A03-         
                                                                                                                                              <---------------------------------------------------------------------------rJMSF048M23#