List of clones in pair P001660.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS033E04Sequence620005286 (9)emb|CDP19763.1|9e-41unnamed protein product [Coffea canephora]
JMFS059A01Sequence624005286 (9)ref|NP_001233765.1|1e-59auxin response factor 2 [Solanum lycopersicum] ref|XP_010318416.1| PREDICTED: au
JMFS095E09Sequence627005286 (9)ref|NP_001233765.1|6e-69auxin response factor 2 [Solanum lycopersicum] ref|XP_010318416.1| PREDICTED: au
JMFS100D12Sequence606005286 (9)ref|NP_001233765.1|2e-67auxin response factor 2 [Solanum lycopersicum] ref|XP_010318416.1| PREDICTED: au
JMFS110A03Sequence397005286 (9)emb|CDP19763.1|3e-20unnamed protein product [Coffea canephora]
JMFS155A06Sequence626005286 (9)ref|NP_001233765.1|2e-64auxin response factor 2 [Solanum lycopersicum] ref|XP_010318416.1| PREDICTED: au
JMSF022F17Sequence677005286 (9)ref|NP_001233765.1|9e-71auxin response factor 2 [Solanum lycopersicum] ref|XP_010318416.1| PREDICTED: au785011420 (3)ref|XP_009625132.1|9e-76PREDICTED: auxin response factor 2-like isoform X2 [Nicotiana tomentosiformis]
JMSF032P19Sequence677005286 (9)ref|NP_001233765.1|9e-80auxin response factor 2 [Solanum lycopersicum] ref|XP_010318416.1| PREDICTED: au767011420 (3)ref|XP_006346635.1|1e-65PREDICTED: auxin response factor 2-like [Solanum tuberosum]
JMSF046O23Sequence715005286 (9)ref|NP_001233765.1|6e-80auxin response factor 2 [Solanum lycopersicum] ref|XP_010318416.1| PREDICTED: au670011420 (3)ref|XP_006346635.1|7e-22PREDICTED: auxin response factor 2-like [Solanum tuberosum]

Contig 5286 BLAST Hits against nr-aa DB Show

Contig 11420 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig005286============================================ 715         ============================================Contig011420============================================1027
   2 --------------------------------------------------------------------------------------------------->JMSF046O23                                      <----------------------------------------------------------------rJMSF046O23  
 243 ---------------------------------------------------------------------------------------------->JMSF022F17        <----------------------------------------------------------------------------rJMSF022F17  
 245      ---------------------------------------------------------------------------------------------->JMSF032P19        <--------------------------------------------------------------------------rJMSF032P19  
           ------------------------------------------------------->JMFS110A03-                                        
               --------------------------------------------------------->JMFS033E04-                                  
          --------------------------------------------------------------------------------------->JMFS155A06-         
       -------------------------------------------------------------------------------------->JMFS059A01-             
           --------------------------------------------------------------------------------------->JMFS095E09-        
               ------------------------------------------------------------------------------------>JMFS100D12-