List of clones in pair P001294.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005H06Sequence712000428 (32)gb|AAF66824.1|AF190656_16e-63poly(A)-binding protein [Nicotiana tabacum]
JMFF021M15Sequence167010731 (3)557000428 (32)gb|AAF66824.1|AF190656_14e-66poly(A)-binding protein [Nicotiana tabacum]
JMFF037L12Sequence131000428 (32)
JMFF047N02Sequence625000428 (32)ref|XP_006346392.1|152PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum]525000428 (32)gb|AAF66824.1|AF190656_14e-59poly(A)-binding protein [Nicotiana tabacum]
JMFN020N05Sequence582000428 (32)gb|AAF66824.1|AF190656_14e-72poly(A)-binding protein [Nicotiana tabacum]
JMFN030F05Sequence559000428 (32)gb|AAF66824.1|AF190656_12e-72poly(A)-binding protein [Nicotiana tabacum]
JMFN031K23Sequence629000428 (32)gb|AAF66824.1|AF190656_12e-52poly(A)-binding protein [Nicotiana tabacum]
JMFN034G13Sequence632000428 (32)gb|AAF66824.1|AF190656_16e-83poly(A)-binding protein [Nicotiana tabacum]
JMFN043E03Sequence554000428 (32)gb|AAF66824.1|AF190656_14e-64poly(A)-binding protein [Nicotiana tabacum]
JMFS012G03Sequence623000428 (32)ref|XP_004230758.1|176PREDICTED: polyadenylate-binding protein 8-like [Solanum lycopersicum]
JMFS033G01Sequence617000428 (32)ref|XP_004230758.1|167PREDICTED: polyadenylate-binding protein 8-like [Solanum lycopersicum]
JMFS037H07Sequence586000428 (32)ref|XP_004230758.1|259PREDICTED: polyadenylate-binding protein 8-like [Solanum lycopersicum]
JMFS045H07Sequence601000428 (32)ref|XP_004230758.1|97.1PREDICTED: polyadenylate-binding protein 8-like [Solanum lycopersicum]
JMFS055H09Sequence627000428 (32)ref|XP_004230758.1|141PREDICTED: polyadenylate-binding protein 8-like [Solanum lycopersicum]
JMFS070C05Sequence621000428 (32)ref|XP_004230758.1|167PREDICTED: polyadenylate-binding protein 8-like [Solanum lycopersicum]
JMFS097B07Sequence615000428 (32)ref|XP_006346392.1|156PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum]
JMFS108B12Sequence627000428 (32)ref|XP_004230758.1|179PREDICTED: polyadenylate-binding protein 8-like [Solanum lycopersicum]
JMFS115D11Sequence627000428 (32)ref|XP_006346392.1|169PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum]
JMFS126A10Sequence639000428 (32)ref|XP_004230758.1|185PREDICTED: polyadenylate-binding protein 8-like [Solanum lycopersicum]
JMFS129A03Sequence626000428 (32)ref|XP_004230758.1|178PREDICTED: polyadenylate-binding protein 8-like [Solanum lycopersicum]
JMFS149A06Sequence620000428 (32)gb|AAF66824.1|AF190656_18e-72poly(A)-binding protein [Nicotiana tabacum]
JMFS154F08Sequence616000428 (32)ref|XP_006346392.1|159PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum]
JMFS156G02Sequence612000428 (32)ref|XP_006346392.1|156PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum]
JMFS168H02Sequence622000428 (32)ref|XP_004230758.1|165PREDICTED: polyadenylate-binding protein 8-like [Solanum lycopersicum]
JMSF005C18Sequence137000428 (32)
JMSF017K12Sequence171010731 (3)690000428 (32)gb|AAF66824.1|AF190656_18e-66poly(A)-binding protein [Nicotiana tabacum]
JMSF026G11Sequence171010731 (3)742000428 (32)gb|AAF66824.1|AF190656_19e-69poly(A)-binding protein [Nicotiana tabacum]
JMSF029A05Sequence172000428 (32)699000428 (32)gb|AAF66824.1|AF190656_12e-66poly(A)-binding protein [Nicotiana tabacum]
JMSF045I14Sequence811000428 (32)emb|CDO97200.1|3e-162unnamed protein product [Coffea canephora]690000428 (32)gb|AAF66824.1|AF190656_18e-70poly(A)-binding protein [Nicotiana tabacum]

Contig 10731 BLAST Hits against nr-aa DB Show

Contig 428 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig010731============================================ 171         ============================================Contig000428============================================2521
  37    ------------------------------------------------------------------------------------------------->JMFF021M15                                                                                <--------------------rJMFF021M15  
  41  ------------------------------------------------------------------------------------------------->JMSF026G11                                                                         <----------------------------rJMSF026G11  
  43  ------------------------------------------------------------------------------------------------->JMSF017K12                                                                           <--------------------------rJMSF017K12  

                                                                                                                        ------------------------>JMFS070C05-  
                                                                                                                         ----------------------->JMFS033G01-  
                                                                                                                                                                                         ------------------------>JMFN034G13-  
                                                                                                                                                                                              ---------------------->JMFN020N05-  
                                                                                                                                                                                             <---------------------------rJMFF005H06- 
                                                                                                                      ---->JMSF005C18-  
                                                                                                                        ------------------------>JMFS168H02-  
                                                                                                                      ------------------------>JMFS055H09-  
                                                                                                                      ---->JMFF037L12-  
                                                                                                                                 ---------------------->JMFS037H07-  
                                                                                                                         ------------------------>JMFS012G03-  
                                                                                                                         ------------------------>JMFS108B12-  
                                                                                                                                                                                       ------------------------>JMFS149A06-  
                                                                                                                        ------------------------>JMFS126A10-  
                                                                                                                                                                               ------------------------>JMFN031K23-  
                                                                                                                        ----------------------->JMFS156G02-  
                                                                                                                                                                                                 --------------------->JMFN030F05-  
                                                                                                                        ----------------------->JMFS045H07-  
                                                                                                                        ------------------------>JMFS129A03-  
                                                                                                                       ------------------------>JMFS154F08-  
                                                                                                                        ------------------------>JMFS115D11-  
                                                                                                                       ------------------------>JMFS097B07-  
                                                                                                                                                                                                    --------------------->JMFN043E03-  
                                                                                                                      ----->JMSF029A05**
                                                                                                                                                                                             <-------------------------rJMSF045I14**
                                                                                                                                                                                             <---------------------------rJMSF029A05**
                                                                                                                                                                                                     <--------------------rJMFF047N02**
                                                                                                                       ------------------------>JMFF047N02**
                                                                                                                                                 ------------------------------->JMSF045I14**