List of clones in pair P001227.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004O16Sequence324000300 (22)dbj|BAJ53182.1|2e-47JHL18I08.16 [Jatropha curcas]741009831 (4)gb|ABG20629.1|2e-94DEF [Cestrum elegans]
JMFF009E08Sequence541000300 (22)ref|XP_009794650.1|5e-88PREDICTED: floral homeotic protein PMADS 1 [Nicotiana sylvestris] emb|CAA65288.1657000300 (22)ref|XP_009619475.1|1e-65PREDICTED: floral homeotic protein PMADS 1 [Nicotiana tomentosiformis]
JMFF016D19Sequence573000300 (22)ref|XP_009794650.1|5e-110PREDICTED: floral homeotic protein PMADS 1 [Nicotiana sylvestris] emb|CAA65288.1793000300 (22)gb|ADO16135.1|1e-84MADS [Ipomoea aquatica]
JMFF026L06Sequence498000300 (22)ref|XP_009794650.1|3e-26PREDICTED: floral homeotic protein PMADS 1 [Nicotiana sylvestris] emb|CAA65288.1459000300 (22)ref|XP_009794650.1|2e-26PREDICTED: floral homeotic protein PMADS 1 [Nicotiana sylvestris] emb|CAA65288.1
JMFF028N08Sequence575000300 (22)ref|XP_009794650.1|5e-110PREDICTED: floral homeotic protein PMADS 1 [Nicotiana sylvestris] emb|CAA65288.1713000300 (22)ref|XP_009619475.1|1e-65PREDICTED: floral homeotic protein PMADS 1 [Nicotiana tomentosiformis]
JMFF035E09Sequence529000300 (22)gb|ADI58370.1|4e-89PAP3 [Capsicum annuum]670009831 (4)gb|ABG20629.1|2e-78DEF [Cestrum elegans]
JMFF039G08Sequence693009831 (4)gb|ABG20629.1|1e-97DEF [Cestrum elegans]
JMFF044K23Sequence641000300 (22)ref|XP_009794650.1|6e-126PREDICTED: floral homeotic protein PMADS 1 [Nicotiana sylvestris] emb|CAA65288.1659000300 (22)ref|XP_009619475.1|1e-52PREDICTED: floral homeotic protein PMADS 1 [Nicotiana tomentosiformis]
JMFF047G02Sequence428000300 (22)ref|XP_009794650.1|2e-66PREDICTED: floral homeotic protein PMADS 1 [Nicotiana sylvestris] emb|CAA65288.1324000300 (22)
JMFF048E06Sequence402000300 (22)ref|XP_009794650.1|4e-65PREDICTED: floral homeotic protein PMADS 1 [Nicotiana sylvestris] emb|CAA65288.1220009831 (4)
JMFN002F06Sequence533000300 (22)ref|XP_009619475.1|2e-37PREDICTED: floral homeotic protein PMADS 1 [Nicotiana tomentosiformis]
JMFN013I21Sequence626000300 (22)ref|XP_009794650.1|1e-119PREDICTED: floral homeotic protein PMADS 1 [Nicotiana sylvestris] emb|CAA65288.1
JMFN034G03Sequence633000300 (22)ref|XP_009794650.1|6e-117PREDICTED: floral homeotic protein PMADS 1 [Nicotiana sylvestris] emb|CAA65288.1
JMFN040I04Sequence640000300 (22)ref|XP_009794650.1|4e-128PREDICTED: floral homeotic protein PMADS 1 [Nicotiana sylvestris] emb|CAA65288.1
JMFN041B07Sequence624000300 (22)ref|XP_009794650.1|4e-116PREDICTED: floral homeotic protein PMADS 1 [Nicotiana sylvestris] emb|CAA65288.1
JMFS111D11Sequence334000300 (22)

Contig 300 BLAST Hits against nr-aa DB Show

Contig 9831 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000300============================================1057         ============================================Contig009831============================================ 728
  85         ------------------------------>JMFF048E06                                                                                                                                      <-----------------------------rJMFF048E06  
 316         ---------------------->JMFF004O16                                                                         <------------------------------------------------------------------rJMFF004O16  
 316         ------------------------------------------>JMFF035E09                                                             <----------------------------------------------------------rJMFF035E09  
     ----------------------------------------------------------->JMFF051N03*                                          
          --------------------------------------------------------->JMFN034G03-                                       
           ------------------------------------------------------------>JMFN040I04-                                   
        ---------------------------------------------------------->JMFN041B07-                                        
                                                                     ------------------------------->JMFS111D11-      
         ---------------------------------------------------------->JMFN013I21-                                       
                                                   ------------------------------------------------->JMFN002F06-      
                                                                                                                      <----------------------------------------------------------------------------------------------rJMFF039G08- 
                                                       --------------------------------------------->JMFF026L06**
          ----------------------------------------------------->JMFF028N08**
          ----------------------------------------------------->JMFF016D19**
                                           <-------------------------------------------------------------rJMFF044K23**
                                     <----------------------------------------------------------------rJMFF028N08**
                             <-----------------------------------------------------------------------rJMFF016D19**
             -------------------------------->JMFF047G02**
      ------------------------------------------------->JMFF009E08**
                                                                       <------------------------------rJMFF047G02**
                                                       <------------------------------------------rJMFF026L06**
          ------------------------------------------------------------>JMFF044K23**
                                    <-------------------------------------------------------------rJMFF009E08**