List of clones in pair P000659.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004N16Sequence461000997 (33)ref|XP_009591976.1|2e-22PREDICTED: protein argonaute 4 [Nicotiana tomentosiformis]659008131 (6)ref|NP_001266156.1|1e-59uncharacterized protein LOC101256023 [Solanum lycopersicum] gb|AFV15381.1| AGO4A
JMFF013H14Sequence570000997 (33)ref|XP_009591976.1|2e-59PREDICTED: protein argonaute 4 [Nicotiana tomentosiformis]656008131 (6)ref|XP_009785001.1|2e-63PREDICTED: protein argonaute 4-like [Nicotiana sylvestris]
JMFF021G19Sequence390000997 (33)ref|XP_009591976.1|9e-20PREDICTED: protein argonaute 4 [Nicotiana tomentosiformis]637008131 (6)ref|NP_001266156.1|2e-48uncharacterized protein LOC101256023 [Solanum lycopersicum] gb|AFV15381.1| AGO4A
JMFS003C02Sequence519008131 (6)ref|NP_001266156.1|4e-47uncharacterized protein LOC101256023 [Solanum lycopersicum] gb|AFV15381.1| AGO4A
JMFS005H11Sequence488000997 (33)ref|XP_009591976.1|2e-43PREDICTED: protein argonaute 4 [Nicotiana tomentosiformis]
JMFS013F07Sequence609000997 (33)ref|XP_006362741.1|1e-77PREDICTED: protein argonaute 4-like [Solanum tuberosum]
JMFS021G06Sequence605000997 (33)ref|XP_009622314.1|3e-68PREDICTED: protein argonaute 4-like [Nicotiana tomentosiformis]
JMFS028D07Sequence629000997 (33)gb|ABC61505.1|2e-75AGO4-2, partial [Nicotiana benthamiana]
JMFS035B09Sequence642000997 (33)ref|XP_006362741.1|2e-88PREDICTED: protein argonaute 4-like [Solanum tuberosum]
JMFS035D09Sequence617000997 (33)ref|XP_006362741.1|2e-82PREDICTED: protein argonaute 4-like [Solanum tuberosum]
JMFS054G10Sequence618000997 (33)ref|XP_009622314.1|2e-69PREDICTED: protein argonaute 4-like [Nicotiana tomentosiformis]
JMFS055B10Sequence619000997 (33)ref|XP_009622314.1|9e-70PREDICTED: protein argonaute 4-like [Nicotiana tomentosiformis]
JMFS064B08Sequence617000997 (33)gb|ABC61505.1|1e-68AGO4-2, partial [Nicotiana benthamiana]
JMFS066A03Sequence624000997 (33)ref|XP_009622314.1|2e-69PREDICTED: protein argonaute 4-like [Nicotiana tomentosiformis]
JMFS066G12Sequence627000997 (33)ref|XP_009622314.1|1e-67PREDICTED: protein argonaute 4-like [Nicotiana tomentosiformis]
JMFS071C11Sequence618000997 (33)ref|XP_009622314.1|4e-74PREDICTED: protein argonaute 4-like [Nicotiana tomentosiformis]
JMFS082H05Sequence639000997 (33)ref|XP_006362741.1|4e-78PREDICTED: protein argonaute 4-like [Solanum tuberosum]
JMFS084E09Sequence615000997 (33)gb|ABC61505.1|3e-69AGO4-2, partial [Nicotiana benthamiana]
JMFS089A01Sequence654000997 (33)ref|XP_006362741.1|7e-75PREDICTED: protein argonaute 4-like [Solanum tuberosum]
JMFS089A08Sequence622000997 (33)ref|XP_009622314.1|2e-68PREDICTED: protein argonaute 4-like [Nicotiana tomentosiformis]
JMFS092H05Sequence613000997 (33)gb|ABC61505.1|3e-69AGO4-2, partial [Nicotiana benthamiana]
JMFS098H03Sequence622000997 (33)ref|XP_009622314.1|2e-69PREDICTED: protein argonaute 4-like [Nicotiana tomentosiformis]
JMFS101C08Sequence609000997 (33)ref|XP_006362741.1|6e-81PREDICTED: protein argonaute 4-like [Solanum tuberosum]
JMFS105H08Sequence617000997 (33)gb|ABC61505.1|1e-68AGO4-2, partial [Nicotiana benthamiana]
JMFS109H05Sequence621000997 (33)ref|XP_006362741.1|3e-78PREDICTED: protein argonaute 4-like [Solanum tuberosum]
JMFS116A02Sequence572000997 (33)ref|XP_006362741.1|2e-87PREDICTED: protein argonaute 4-like [Solanum tuberosum]
JMFS117A03Sequence615000997 (33)ref|XP_009622314.1|1e-68PREDICTED: protein argonaute 4-like [Nicotiana tomentosiformis]
JMFS123G05Sequence577000997 (33)ref|XP_009591976.1|8e-63PREDICTED: protein argonaute 4 [Nicotiana tomentosiformis]
JMFS138H07Sequence622000997 (33)gb|ABC61505.1|4e-69AGO4-2, partial [Nicotiana benthamiana]
JMFS151A03Sequence626000997 (33)ref|XP_009622314.1|8e-75PREDICTED: protein argonaute 4-like [Nicotiana tomentosiformis]
JMFS154E10Sequence608000997 (33)gb|ABC61505.1|3e-69AGO4-2, partial [Nicotiana benthamiana]
JMFS168F01Sequence621000997 (33)ref|XP_009622314.1|5e-69PREDICTED: protein argonaute 4-like [Nicotiana tomentosiformis]
JMSF033N16Sequence591000997 (33)ref|XP_009591976.1|3e-59PREDICTED: protein argonaute 4 [Nicotiana tomentosiformis]692008131 (6)ref|XP_009785001.1|7e-78PREDICTED: protein argonaute 4-like [Nicotiana sylvestris]
JMSF050F08Sequence671000997 (33)ref|XP_006362741.1|3e-75PREDICTED: protein argonaute 4-like [Solanum tuberosum]774008131 (6)gb|ACZ04920.1|3e-117argonaute 4-like protein [Pelargonium x hortorum]

Contig 997 BLAST Hits against nr-aa DB Show

Contig 8131 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000997============================================1034         ============================================Contig008131============================================ 902
   3 -------------------------------------------->JMFF004N16                                                                                     <------------------------------------------------------------------------rJMFF004N16  
   8 ------------------------------------->JMFF021G19                                                                                             <----------------------------------------------------------------------rJMFF021G19  
  35 ------------------------------------------------------>JMFF013H14                                                                          <---------------------------------------------------------------------rJMFF013H14  
  53 -------------------------------------------------------->JMSF033N16                                                                <----------------------------------------------------------------------------rJMSF033N16  
 128 ---------------------------------------------------------------->JMSF050F08                                      <-------------------------------------------------------------------------------------rJMSF050F08  
             ------------------------------------------------------------->JMFS035B09-                                
       ----------------------------------------------------------->JMFS138H07-                                        
          ----------------------------------------------------------->JMFS071C11-                                     
        ---------------------------------------------------------->JMFS092H05-                                        
        ----------------------------------------------------------->JMFS105H08-                                       
      ------------------------------------------------------------>JMFS066G12-                                        
         ------------------------------------------------------------>JMFS028D07-                                     
         ------------------------------------------------------------>JMFS151A03-                                     
       ------------------------------------------------------>JMFS123G05-                                             
      -------------------------------------------------------------->JMFS089A01-                                      
      ----------------------------------------------------------->JMFS089A08-                                         
             ----------------------------------------------------------->JMFS035D09-                                  
            ---------------------------------------------------------->JMFS013F07-                                    
        ---------------------------------------------------------->JMFS154E10-                                        
       ----------------------------------------------------------->JMFS054G10-                                        
           ----------------------------------------------------------->JMFS109H05-                                    
       --------------------------------------------->JMFS005H11-                                                      
                                              ---------------------------------------------------------->JMFS101C08-  
        ---------------------------------------------------------->JMFS021G06-                                        
       ----------------------------------------------------------->JMFS084E09-                                        
       ----------------------------------------------------------->JMFS098H03-                                        
       ----------------------------------------------------------->JMFS117A03-                                        
       ----------------------------------------------------------->JMFS066A03-                                        
        ----------------------------------------------------------->JMFS064B08-                                       
       ----------------------------------------------------------->JMFS168F01-                                        
                   ------------------------------------------------------>JMFS116A02-                                 
         ------------------------------------------------------------->JMFS082H05-                                    
       ----------------------------------------------------------->JMFS055B10-                                        
                                                                                                                                                        --------------------------------------------------------->JMFS003C02-