List of clones in pair P000578.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS140D05Sequence527003619 (8)ref|XP_009110452.1|8e-58PREDICTED: organic cation/carnitine transporter 3 isoform X2 [Brassica rapa]
JMSF008L05Sequence401003619 (8)ref|XP_006304573.1|1e-36hypothetical protein CARUB_v10011593mg [Capsella rubella] gb|EOA37471.1| hypothe783012565 (6)ref|XP_009627799.1|2e-90PREDICTED: organic cation/carnitine transporter 3-like [Nicotiana tomentosiform
JMSF015E10Sequence262003619 (8)ref|XP_006416822.1|1e-22hypothetical protein EUTSA_v10007377mg [Eutrema salsugineum] gb|ESQ35175.1| hypo801012565 (6)ref|XP_009627799.1|2e-84PREDICTED: organic cation/carnitine transporter 3-like [Nicotiana tomentosiform
JMSF015M16Sequence472003619 (8)emb|CDX83951.1|2e-47BnaC08g16940D [Brassica napus]773012565 (6)ref|XP_009627799.1|2e-85PREDICTED: organic cation/carnitine transporter 3-like [Nicotiana tomentosiform
JMSF024B07Sequence659003619 (8)emb|CDX83951.1|3e-56BnaC08g16940D [Brassica napus]780012565 (6)ref|XP_009627799.1|2e-91PREDICTED: organic cation/carnitine transporter 3-like [Nicotiana tomentosiform
JMSF034N22Sequence628003619 (8)ref|XP_010260769.1|6e-75PREDICTED: organic cation/carnitine transporter 3-like [Nelumbo nucifera]653012565 (6)ref|XP_009627799.1|9e-82PREDICTED: organic cation/carnitine transporter 3-like [Nicotiana tomentosiform
JMSF035N22Sequence181012565 (6)ref|XP_009627799.1|7e-15PREDICTED: organic cation/carnitine transporter 3-like [Nicotiana tomentosiform

Contig 3619 BLAST Hits against nr-aa DB Show

Contig 12565 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig003619============================================ 665         ============================================Contig012565============================================ 809
   2 ---------------------------------------------------------------------->JMSF015M16                                    <-----------------------------------------------------------------------------------------------rJMSF015M16  
  12 -------------------------------------->JMSF015E10                                                                <--------------------------------------------------------------------------------------------------rJMSF015E10  
  12 -------------------------------------------------------->JMSF008L05                                                <------------------------------------------------------------------------------------------------rJMSF008L05  
  34  -------------------------------------------------------------------------------------------------->JMSF024B07    <-----------------------------------------------------------------------------------------------rJMSF024B07  
  86 --------------------------------------------------------------------------------------------->JMSF034N22                    <------------------------------------------------------------------------------rJMSF034N22  
      --------------------------------------------------------------------------->JMFF048K13*                         
          ----------------------------------------------------------------------->JMFS140D05-                         
      ------------------------------------------------------------------------->JMFF040O04*                           
                                                                                                                                                                      <---------------------rJMSF035N22-