List of clones in pair P000563.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005M09Sequence507013272 (5)ref|XP_010318446.1|3e-80PREDICTED: 26S protease regulatory subunit 7 homolog A isoform X2 [Solanum lyco729004100 (9)emb|CAN80220.1|4e-120hypothetical protein VITISV_027893 [Vitis vinifera]
JMFF011A13Sequence513013272 (5)gb|KDO53742.1|2e-116hypothetical protein CISIN_1g014332mg [Citrus sinensis]729004100 (9)emb|CAN80220.1|2e-106hypothetical protein VITISV_027893 [Vitis vinifera]
JMFF018K20Sequence466004100 (9)emb|CAN80220.1|7e-26hypothetical protein VITISV_027893 [Vitis vinifera]807004100 (9)emb|CAN80220.1|2e-104hypothetical protein VITISV_027893 [Vitis vinifera]
JMFF022C14Sequence343004100 (9)
JMFF042L18Sequence645013272 (5)ref|XP_010318446.1|2e-112PREDICTED: 26S protease regulatory subunit 7 homolog A isoform X2 [Solanum lyco612004100 (9)emb|CAN80220.1|4e-68hypothetical protein VITISV_027893 [Vitis vinifera]
JMFN017P18Sequence606004100 (9)emb|CAN80220.1|7e-96hypothetical protein VITISV_027893 [Vitis vinifera]
JMSF009B23Sequence268013272 (5)ref|XP_006493392.1|3e-54PREDICTED: 26S protease regulatory subunit 7-like [Citrus sinensis]770004100 (9)gb|ABR25957.1|1e-13226S protease regulatory subunit 7 [Oryza sativa Indica Group]
JMSF011A09Sequence202013272 (5)ref|XP_010318446.1|3e-17PREDICTED: 26S protease regulatory subunit 7 homolog A isoform X2 [Solanum lyco779004100 (9)gb|ACU19621.1|5e-135unknown [Glycine max]

Contig 13272 BLAST Hits against nr-aa DB Show

Contig 4100 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig013272============================================ 757         ============================================Contig004100============================================1033
   6  ------------------------------------------------------------------------------------>JMFF042L18                                                          <----------------------------------------------------------rJMFF042L18  
  68  ----------------------------------------------------------------->JMFF005M09                                                                  <---------------------------------------------------------------rJMFF005M09  
  73 -------------------------->JMSF011A09                                                                                                          <--------------------------------------------------------------rJMSF011A09  
 258                                 ------------------------------------------------------------------->JMFF011A13                               <----------------------------------------------------------------------rJMFF011A13  
 298                               ---------------------------------->JMSF009B23                                                                   <---------------------------------------------------------------rJMSF009B23  

                                                                                                                                                                                          <---------rJMFF022C14- 
                                                                                                                                                       --------------------------------------------------------->JMFN017P18-  
                                                                                                                                       <-----------------------------------------------------------------------------rJMFF018K20**
                                                                                                                      -------------------------------------------->JMFF018K20**