List of clones in pair P000540.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005M05Sequence549005979 (7)gb|AAD32141.1|AF123503_12e-81Nt-gh3 deduced protein [Nicotiana tabacum]583004097 (9)gb|ABN05326.1|4e-74GH3 protein [Rhodiola sachalinensis]
JMFF018M18Sequence571005979 (7)gb|AAD32141.1|AF123503_13e-87Nt-gh3 deduced protein [Nicotiana tabacum]688004097 (9)gb|ABN05326.1|3e-88GH3 protein [Rhodiola sachalinensis]
JMFF025O09Sequence620005979 (7)emb|CDO97242.1|9e-98unnamed protein product [Coffea canephora]730004097 (9)gb|ABN05326.1|3e-83GH3 protein [Rhodiola sachalinensis]
JMFF042C19Sequence650005979 (7)emb|CDO97242.1|7e-106unnamed protein product [Coffea canephora]620004097 (9)gb|ABN05326.1|2e-65GH3 protein [Rhodiola sachalinensis]
JMFF043L14Sequence637005979 (7)gb|AAD32141.1|AF123503_13e-103Nt-gh3 deduced protein [Nicotiana tabacum]395004097 (9)gb|EPS68048.1|2e-14hypothetical protein M569_06726, partial [Genlisea aurea]
JMFN003P11Sequence497004097 (9)gb|ABN05326.1|1e-43GH3 protein [Rhodiola sachalinensis]
JMFN020M19Sequence387004097 (9)ref|XP_004230721.1|4e-55PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Solanum lycope
JMFN038P18Sequence608004097 (9)ref|XP_004230721.1|2e-108PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Solanum lycope
JMFS139H01Sequence641005979 (7)emb|CDO97242.1|1e-106unnamed protein product [Coffea canephora]
JMFS151D07Sequence618005979 (7)gb|AAD32141.1|AF123503_12e-103Nt-gh3 deduced protein [Nicotiana tabacum]

Contig 5979 BLAST Hits against nr-aa DB Show

Contig 4097 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig005979============================================ 642         ============================================Contig004097============================================ 809
   7  -------------------------------------------------------------------------------------->JMFF042C19                                      <----------------------------------------------------------------------------rJMFF042C19  
  14  -------------------------------------------------------------------------------------------------->JMFF043L14                                                     <------------------------------------------------rJMFF043L14  
  69 ------------------------------------------------------------------------------------------------>JMFF025O09        <-----------------------------------------------------------------------------------------rJMFF025O09  
  76  ---------------------------------------------------------------------------------------->JMFF018M18                   <------------------------------------------------------------------------------------rJMFF018M18  
 113  ------------------------------------------------------------------------------------->JMFF005M05                               <-----------------------------------------------------------------------rJMFF005M05  
         ----------------------------------------------------------------------------------------------->JMFS151D07-  
       ------------------------------------------------------------------------------------>JMFS139H01-               
                                                                                                                      -------------------------------------------------------------------------->JMFN038P18-  
                                                                                                                                     <--------------------------------------------------------------------------rJMFF039H15* 
                                                                                                                       ---------------------------------------------->JMFN020M19-  
                                                                                                                                                          ------------------------------------------------------------->JMFN003P11-