List of clones in pair P000488.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001M09Sequence542002364 (30)ref|XP_009622218.1|3e-58PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis]608011382 (29)ref|XP_009622218.1|6e-58PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis]
JMFF010J14Sequence553002364 (30)ref|XP_009622218.1|2e-41PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis]702011382 (29)ref|XP_009622218.1|2e-57PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis]
JMFF035I18Sequence508002364 (30)ref|XP_009760524.1|3e-48PREDICTED: pollen-specific protein C13-like [Nicotiana sylvestris]683011382 (29)ref|XP_009622218.1|1e-57PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis]
JMFF041N08Sequence652002364 (30)ref|XP_009622218.1|3e-58PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis]600011382 (29)ref|XP_009622218.1|3e-58PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis]
JMFF050K13Sequence635002364 (30)ref|XP_009622218.1|3e-58PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis]504011382 (29)ref|XP_009622218.1|2e-38PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis]

Contig 2364 BLAST Hits against nr-aa DB Show

Contig 11382 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig002364============================================ 725         ============================================Contig011382============================================1538
  61         --------------------------------------------------------------------------->JMFF010J14                                                                         <---------------------------------------------rJMFF010J14  
  92   ----------------------------------------------------------------------------------------->JMFF041N08                                                                   <--------------------------------------rJMFF041N08  
  94   -------------------------------------------------------------------------------------->JMFF050K13                                                                              <-----------------------------rJMFF050K13  
 101  --------------------------------------------------------------------->JMFF035I18                                                                                 <-------------------------------------------rJMFF035I18  
 166          ------------------------------------------------------------------------->JMFF001M09                                                                          <---------------------------------------rJMFF001M09  
 816          <----------------------------------------------------------------------------------rJMSF038F08                                                           ----------------------------------------->JMSF038F08   
                   ------------------------------------------------------------------------------->JMFN038G20-        
               ----------------------------------------------------------------------------------->JMFN015F04-        
         ----------------------------------------------------------------------------->JMFN042P02-                    
                     ----------------------------------------------------------------------------->JMFN017L10-        
        ------------------------------------------------------------------------------------->JMFN010J13-             
         ------------------------------------------------------------------------------------------>JMFN028P09-       
           ------------------------------------------------------------------------------------->JMFN007J03-          
         ------------------------------------------------------------------------------------>JMFN034F15-             
                      ----------------------------------------------------------------------->JMFN004L20-             
              -------------------------------------------------------------------------->JMFF014E11-                  
                --------------------------------------------------------------------------->JMFN016C16-               
         ------------------------------------------------------------------------------------>JMFN014N16-             
       ------------------------------------------------------------------------------------->JMFN014D23-              
                  --------------------------------------------------------------------------------->JMFN037L09-       
                   -------------------------------------------------------------------------------->JMFN036O16-       
         ------------------------------------------------------------------------------------>JMFN016A02-             
                  --------------------------------------------------------------------->JMFN029G16-                   
        ------------------------------------------------------------------------------------->JMFN044H12-             
                                                      <---------------------------------------------rJMFF016F08-      
      ----------------------------->JMFN043N14-                                                                       
                                                                                                                                                                         ---------------------------------------->JMFN041B11-  
                                                                                                                                                                         ---------------------------------------->JMFN015O14-  
                                                                                                                                                                        --------------------------------------->JMFN031E18-  
                                                                                                                      <-----------------------------------------------rJMSF038J21* 
                                                                                                                                                       <-----------------------------------------------------------rJMSF038K17* 
                                                                                                                                                                         --------------------------------------->JMFN015G23-  
                                                                                                                                                                                         <------------------------JMFN046C05-  
                                                                                                                                                                         -------------------------------------->JMFN037A14-  
                                                                                                                                                ---------------------->JMFS086C04-  
                                                                                                                                                                       <------------------------------------------rJMSF023J18* 
                                                                                                                                                                        --------------------------------------->JMFN008P18-  
                                                                                                                                                                       --------------------->JMSF009M17-  
                                                                                                                         <-------------------------------------rJMFF026J07* 
                                                                                                                                                                                          -------------------------->JMFN028A06-  
                                                                                                                                                                             --------------------------------------->JMFN003F23-  
                                                                                                                                                                            <-------------------------------------------rJMSF012K01* 
                                                                                                                                  <------------------------------rJMSF041E09* 
                                                                                                                                                                             ------------------------------------>JMFN017P20-  
                                                                                                                                                                        ---------------------------------------->JMFN032M20-  
     ------------------------------------------------------------------------------------------->JMSF037I16**
         <-----------------------------------------------------------------------------------------------rJMSF037I16**
      <--------------------------------------------------------------------------------------------------rJMSF020K18**
      -------------------------------------------------------------------------------------------->JMSF020K18**
                                                                                                                                                                       ------------------------------------------->JMSF026B16**
                                                                                                                                                                       ---------------------------------->JMFF004I23**
                                                                                                                                                                       <-----------------------------------------rJMSF026B16**
                                                                                                                                                                       <----------------------------------------rJMFF004I23**