List of clones in pair P000478.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009E24Sequence588004917 (10)ref|XP_011099906.1|8e-19PREDICTED: probable inactive receptor kinase At1g48480 [Sesamum indicum]541001179 (5)ref|XP_009592532.1|8e-31PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]
JMFF029I08Sequence441004917 (10)emb|CDP01639.1|6e-04unnamed protein product [Coffea canephora]
JMFF041D21Sequence631004917 (10)ref|XP_009592532.1|4e-29PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]633001179 (5)ref|XP_009592532.1|2e-59PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]
JMFF048I11Sequence487004917 (10)ref|XP_011099906.1|4e-52PREDICTED: probable inactive receptor kinase At1g48480 [Sesamum indicum]
JMFS067D03Sequence636004917 (10)ref|XP_011085845.1|2e-37PREDICTED: probable inactive receptor kinase At1g48480 [Sesamum indicum]
JMFS141C06Sequence626004917 (10)emb|CDP01639.1|4e-35unnamed protein product [Coffea canephora]
JMSF002C03Sequence339004917 (10)508001179 (5)ref|XP_007032119.1|4e-28Receptor-like kinase 1 [Theobroma cacao] gb|EOY03045.1| Receptor-like kinase 1 [
JMSF006M12Sequence304004917 (10)390001179 (5)ref|XP_009592532.1|4e-55PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]
JMSF008J05Sequence358004917 (10)687001179 (5)ref|XP_009592532.1|1e-97PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]

Contig 4917 BLAST Hits against nr-aa DB Show

Contig 1179 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig004917============================================1049         ============================================Contig001179============================================ 861
   6 ----------------------------------------------------------->JMFF041D21                                                                     <-------------------------------------------------------------------------rJMFF041D21  
  42 ------------------------------->JMSF002C03                                                                                                           <----------------------------------------------------------rJMSF002C03  
  71     ----------------------------------------------------->JMFF009E24                                                                                 <------------------------------------------------------------rJMFF009E24  
 182 --------------------------------->JMSF008J05                                                                     <-------------------------------------------------------------------------------rJMSF008J05  
 237 ---------------------------->JMSF006M12                                                                                                       <-------------------------------------------rJMSF006M12  
        ------------------------------------------------------------>JMFS067D03-                                      
        ----------------------------------------------------------->JMFS141C06-                                       
                                               --------------------------------------------------------->JMFF007J16#  
                                              ---------------------------------------------->JMFF048I11-              
       ----------------------------------------->JMFF029I08-