List of clones in pair P000333.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008N07Sequence536008748 (11)ref|XP_009610166.1|2e-50PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X2 [Nicotiana tomento688005678 (9)gb|KHN43447.1|7e-50DEAD-box ATP-dependent RNA helicase 24 [Glycine soja]
JMFF010N09Sequence649008748 (11)ref|XP_009610165.1|2e-65PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X1 [Nicotiana tomento772005678 (9)gb|KHN43447.1|2e-55DEAD-box ATP-dependent RNA helicase 24 [Glycine soja]
JMFF014M03Sequence578008748 (11)ref|XP_009610165.1|2e-62PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X1 [Nicotiana tomento820005678 (9)gb|KHN43447.1|3e-70DEAD-box ATP-dependent RNA helicase 24 [Glycine soja]
JMFF034C07Sequence331008748 (11)ref|XP_006388444.1|1e-32hypothetical protein POPTR_0184s002102g, partial [Populus trichocarpa] gb|ERP473758005678 (9)gb|KHN43447.1|1e-67DEAD-box ATP-dependent RNA helicase 24 [Glycine soja]
JMFF041A20Sequence633008748 (11)ref|XP_009610166.1|1e-72PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X2 [Nicotiana tomento481005678 (9)gb|KHN19202.1|6e-26DEAD-box ATP-dependent RNA helicase 24 [Glycine soja]
JMFF043C04Sequence648008748 (11)ref|XP_009610165.1|5e-66PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X1 [Nicotiana tomento626005678 (9)ref|XP_009610165.1|9e-33PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X1 [Nicotiana tomento
JMFS069B08Sequence627008748 (11)ref|XP_009610166.1|1e-92PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X2 [Nicotiana tomento
JMFS070H02Sequence625008748 (11)ref|XP_009610166.1|4e-75PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X2 [Nicotiana tomento
JMFS075B01Sequence627008748 (11)ref|XP_009610166.1|2e-71PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X2 [Nicotiana tomento
JMFS101G09Sequence604008748 (11)ref|XP_009610166.1|7e-70PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X2 [Nicotiana tomento
JMSF009I24Sequence242008748 (11)ref|XP_006388444.1|7e-27hypothetical protein POPTR_0184s002102g, partial [Populus trichocarpa] gb|ERP473743005678 (9)gb|KHN43447.1|7e-62DEAD-box ATP-dependent RNA helicase 24 [Glycine soja]

Contig 8748 BLAST Hits against nr-aa DB Show

Contig 5678 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig008748============================================ 739         ============================================Contig005678============================================1009
 218  -------------------------------------------------------------------------------------->JMFF043C04                                  <-----------------------------------------------------------rJMFF043C04  
 227  ------------------------------------------------------------------------------------->JMFF041A20                                              <-----------------------------------------------rJMFF041A20  
 236 ------------------------------------------------------------------------>JMFF008N07                                       <-------------------------------------------------------------------rJMFF008N07  
 298          --------------------------------------------------------------------------------------->JMFF010N09      <----------------------------------------------------------------------------rJMFF010N09  
 300          ------------------------------->JMSF009I24                                                                  <------------------------------------------------------------------------rJMSF009I24  
 300          -------------------------------------------->JMFF034C07                                                   <--------------------------------------------------------------------------rJMFF034C07  
 317               ---------------------------------------------------------------------------->JMFF014M03            <------------------------------------------------------------------------------rJMFF014M03  
        ------------------------------------------------------------------------------------>JMFS070H02-              
                    ------------------------------------------------------------------------------------>JMFS069B08-  
        --------------------------------------------------------------------------------->JMFS101G09-                 
        ------------------------------------------------------------------------------------>JMFS075B01-              
                                                                                                                                              <---------------------------------------------------------------------------rJMSF022A04* 
                                                                                                                                            <----------------------------------------------------------------------------rJMSF045O02*