List of clones in pair P000253.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009H08Sequence580008980 (19)emb|CDO99639.1|2e-78unnamed protein product [Coffea canephora]666008325 (8)ref|XP_008383826.1|1e-07PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Malus domestica] ref|XP
JMFF016L17Sequence462008980 (19)emb|CDO99639.1|2e-54unnamed protein product [Coffea canephora]707008325 (8)ref|XP_008383826.1|3e-10PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Malus domestica] ref|XP
JMFF040O11Sequence613008980 (19)emb|CDO99639.1|2e-86unnamed protein product [Coffea canephora]731008325 (8)ref|XP_008383826.1|1e-15PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Malus domestica] ref|XP
JMFF042E12Sequence644008980 (19)emb|CDO99639.1|7e-106unnamed protein product [Coffea canephora]
JMFF043I13Sequence639008980 (19)emb|CDO99639.1|2e-91unnamed protein product [Coffea canephora]615008325 (8)
JMFF043K13Sequence639008980 (19)emb|CDO99639.1|3e-90unnamed protein product [Coffea canephora]632008325 (8)
JMFF043M10Sequence620008980 (19)emb|CDO99639.1|3e-89unnamed protein product [Coffea canephora]651008325 (8)
JMFF043P08Sequence635008980 (19)emb|CDO99639.1|3e-96unnamed protein product [Coffea canephora]611008325 (8)
JMFF049L19Sequence623008980 (19)emb|CDO99639.1|6e-103unnamed protein product [Coffea canephora]
JMFS003H09Sequence563008980 (19)emb|CDO99639.1|2e-26unnamed protein product [Coffea canephora]
JMFS024G01Sequence604008980 (19)emb|CDO99639.1|3e-92unnamed protein product [Coffea canephora]
JMFS050D01Sequence440008980 (19)ref|XP_007025804.1|6e-31F-box/RNI-like superfamily protein isoform 2 [Theobroma cacao] gb|EOY28426.1| F-
JMFS074A09Sequence606008980 (19)ref|XP_006347140.1|3e-35PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Solanum tuberosum]
JMFS082F02Sequence612008980 (19)ref|XP_006347140.1|2e-37PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Solanum tuberosum]
JMFS131H03Sequence612008980 (19)emb|CDO99639.1|5e-93unnamed protein product [Coffea canephora]
JMFS160F05Sequence602008980 (19)emb|CDO99639.1|5e-87unnamed protein product [Coffea canephora]
JMFS161E10Sequence592008980 (19)emb|CDO99639.1|6e-60unnamed protein product [Coffea canephora]
JMFS164H03Sequence589008980 (19)emb|CDO99639.1|2e-63unnamed protein product [Coffea canephora]
JMSF013K06Sequence497008980 (19)emb|CDO99639.1|8e-62unnamed protein product [Coffea canephora]730008325 (8)ref|XP_008383826.1|2e-22PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Malus domestica] ref|XP

Contig 8980 BLAST Hits against nr-aa DB Show

Contig 8325 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig008980============================================ 923         ============================================Contig008325============================================ 834
 230                          ------------------------------------------------------------------>JMFF043M10                                 <-----------------------------------------------------------------------------rJMFF043M10  
 273                         -------------------------------------------------------------------->JMFF043I13                                <----------------------------------------------------------------------rJMFF043I13  
 273                         -------------------------------------------------------------------->JMFF043K13                                <----------------------------------------------------------------------rJMFF043K13  
 291                         ------------------------------------------------->JMFF016L17                                    <------------------------------------------------------------------------------------rJMFF016L17  
 294                         ------------------------------------------------------------------>JMFF040O11               <---------------------------------------------------------------------------------------rJMFF040O11  
 301                            -------------------------------------------------------------------->JMFF043P08                            <-----------------------------------------------------------------------rJMFF043P08  
 303                         -------------------------------------------------------------->JMFF009H08                          <-------------------------------------------------------------------------------rJMFF009H08  
 326                         ----------------------------------------------------->JMSF013K06                         <--------------------------------------------------------------------------------------rJMSF013K06  
                  --------------------------------------------------------------->JMFS161E10-                         
                                  ----------------------------------------------->JMFS050D01-                         
                    --------------------------------------------------------------->JMFS164H03-                       
                                       ---------------------------------------------------------->JMFS024G01-         
                                  ------------------------------------------------------------------>JMFS131H03-      
      ---------------------------------------------------------------->JMFS074A09-                                    
                                   --------------------------------------------------------------------->JMFF042E12-  
      ------------------------------------------------------------------>JMFS082F02-                                  
                               ---------------------------------------------------------------->JMFS160F05-           
                                    ------------------------------------------------------------->JMFF049L19-         
     ------------------------------------------------------------>JMFS003H09-