List of clones in pair P000239.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015B19Sequence275001000 (10)ref|XP_009794726.1|6e-22PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve634009804 (8)ref|XP_009794726.1|1e-75PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve
JMFF022G14Sequence522001000 (10)ref|XP_009794726.1|3e-67PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve198009804 (8)
JMFF025J14Sequence530001000 (10)ref|XP_009794726.1|3e-67PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve679009804 (8)ref|XP_009794726.1|3e-104PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve
JMFF045H05Sequence627001000 (10)ref|XP_009794726.1|1e-83PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve494009804 (8)ref|XP_009794726.1|2e-20PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve
JMFS004C07Sequence125001000 (10)
JMSF002P12Sequence233001000 (10)gb|AHC69823.1|5e-14polygalacturonase isoenzyme 1 beta subunit [Nicotiana tabacum]664009804 (8)ref|XP_009794726.1|3e-108PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve
JMSF008D22Sequence163001000 (10)
JMSF014K19Sequence403001000 (10)gb|AHC69823.1|6e-42polygalacturonase isoenzyme 1 beta subunit [Nicotiana tabacum]774009804 (8)ref|XP_009794726.1|3e-139PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve
JMSF048C13Sequence679001000 (10)ref|XP_009794726.1|1e-91PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve770009804 (8)ref|XP_009794726.1|2e-137PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve
JMSF050P13Sequence668001000 (10)gb|AHC69823.1|3e-88polygalacturonase isoenzyme 1 beta subunit [Nicotiana tabacum]699009804 (8)ref|XP_009794726.1|9e-84PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like [Nicotiana sylve

Contig 1000 BLAST Hits against nr-aa DB Show

Contig 9804 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig001000============================================ 681         ============================================Contig009804============================================ 836
  15   ------------------------------------------------------------------------------------------->JMFF045H05                                                   <---------------------------------------------------------rJMFF045H05  
  27 ------------------------------------------------------------------------------------------------->JMSF050P13                   <----------------------------------------------------------------------------------rJMSF050P13  
  30  ----------------------------------------------------------------------------->JMFF025J14                                        <--------------------------------------------------------------------------------rJMFF025J14  
  35  ---------------------------------------------------------------------------->JMFF022G14                                                                                                  <-----------------------rJMFF022G14  
  40  --------------------------------------->JMFF015B19                                                                                   <--------------------------------------------------------------------------rJMFF015B19  
  58  --------------------------------->JMSF002P12                                                                                   <------------------------------------------------------------------------------rJMSF002P12  
  67  --------------------------------------------------------------------------------------------------->JMSF048C13   <-------------------------------------------------------------------------------------------rJMSF048C13  
  68  ---------------------------------------------------------->JMSF014K19                                           <--------------------------------------------------------------------------------------------rJMSF014K19  
         ------------->JMFS004C07-                                                                                    
        ----------------------->JMSF008D22-