List of clones in pair P000233.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024A18Sequence409007856 (12)emb|CAA75777.1|9e-38transketolase 1 [Capsicum annuum]772000369 (13)ref|XP_009596626.1|5e-67PREDICTED: transketolase, chloroplastic [Nicotiana tomentosiformis]
JMFF037O24Sequence528007856 (12)emb|CAA75777.1|6e-70transketolase 1 [Capsicum annuum]758000369 (13)ref|XP_009386531.1|2e-64PREDICTED: transketolase, chloroplastic-like [Musa acuminata subsp. malaccensis
JMFF038L18Sequence541007856 (12)emb|CAA75777.1|4e-69transketolase 1 [Capsicum annuum]760000369 (13)ref|XP_009386531.1|2e-64PREDICTED: transketolase, chloroplastic-like [Musa acuminata subsp. malaccensis
JMFF040E06Sequence527007856 (12)emb|CAA75777.1|6e-70transketolase 1 [Capsicum annuum]762000369 (13)ref|XP_009596626.1|1e-69PREDICTED: transketolase, chloroplastic [Nicotiana tomentosiformis]
JMFN044D18Sequence556000369 (13)ref|XP_009631450.1|8e-29PREDICTED: transketolase, chloroplastic-like [Nicotiana tomentosiformis]
JMFN044G11Sequence613000369 (13)ref|XP_008438176.1|7e-121PREDICTED: transketolase, chloroplastic [Cucumis melo]
JMFS039F05Sequence649007856 (12)emb|CDO97702.1|7e-96unnamed protein product [Coffea canephora]
JMFS051B04Sequence598007856 (12)emb|CAA75777.1|3e-97transketolase 1 [Capsicum annuum]
JMFS103C04Sequence572007856 (12)emb|CAA75777.1|1e-89transketolase 1 [Capsicum annuum]
JMFS122F02Sequence512000369 (13)ref|XP_009631450.1|5e-20PREDICTED: transketolase, chloroplastic-like [Nicotiana tomentosiformis]
JMFS153G01Sequence615007856 (12)emb|CAA75777.1|2e-101transketolase 1 [Capsicum annuum]
JMSF018N12Sequence520007856 (12)emb|CAA75777.1|2e-68transketolase 1 [Capsicum annuum]786000369 (13)ref|XP_009386531.1|7e-76PREDICTED: transketolase, chloroplastic-like [Musa acuminata subsp. malaccensis
JMSF019D13Sequence411007856 (12)emb|CDO97702.1|2e-18unnamed protein product [Coffea canephora]759000369 (13)ref|XP_009386531.1|2e-64PREDICTED: transketolase, chloroplastic-like [Musa acuminata subsp. malaccensis
JMSF027P13Sequence682007856 (12)emb|CAA75777.1|1e-107transketolase 1 [Capsicum annuum]717000369 (13)ref|XP_009386531.1|4e-89PREDICTED: transketolase, chloroplastic-like [Musa acuminata subsp. malaccensis
JMSF028B02Sequence616007856 (12)emb|CDO97702.1|2e-70unnamed protein product [Coffea canephora]762000369 (13)ref|XP_009386531.1|2e-80PREDICTED: transketolase, chloroplastic-like [Musa acuminata subsp. malaccensis
JMSF047M24Sequence627000369 (13)ref|XP_004240048.1|6e-47PREDICTED: transketolase, chloroplastic-like [Solanum lycopersicum]

Contig 7856 BLAST Hits against nr-aa DB Show

Contig 369 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig007856============================================ 768         ============================================Contig000369============================================1116
  32 ----------------------------------------------------->JMSF019D13                                                                              <-------------------------------------------------------------------rJMSF019D13  
  40 ------------------------------------------------------------------------------->JMSF028B02                                                    <-------------------------------------------------------------------rJMSF028B02  
 115            ------------------------------------------------------------------->JMFF038L18                                                     <-------------------------------------------------------------------rJMFF038L18  
 115            -------------------------------------------------------------------->JMFF037O24                                                    <-------------------------------------------------------------------rJMFF037O24  
 116            ---------------------------------------------------->JMFF024A18                                                                   <--------------------------------------------------------------------rJMFF024A18  
 134            -------------------------------------------------------------------->JMFF040E06                                                   <-------------------------------------------------------------------rJMFF040E06  
 178             ------------------------------------------------------------------->JMSF018N12                                            <----------------------------------------------------------------------rJMSF018N12  
 250            ---------------------------------------------------------------------------------------->JMSF027P13                        <---------------------------------------------------------------rJMSF027P13  
                    ------------------------------------------------------------------------->JMFS103C04-             
                   ------------------------------------------------------------------------------>JMFS039F05-         
                    ----------------------------------------------------------------------------->JMFS051B04-         
                     ------------------------------------------------------------------------------->JMFS153G01-      
                                                                                                                                                                 <--------------------------------------------rJMSF047M24- 
                                                                                                                                                    <---------------------------------------------------------rJMSF020E18* 
                                                                                                                                                                        ------------------------------------------------->JMFN044D18-  
                                                                                                                                                                            <---------------------------------------------JMFS122F02-  
                                                                                                                      ------------------------------------------------------>JMFN044G11-