List of clones in pair P000202.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002N06Sequence551003291 (19)gb|KJB84163.1|2e-61hypothetical protein B456_N007500 [Gossypium raimondii]754009796 (9)gb|AFR66645.1|4e-106MIP1.1a [Nicotiana benthamiana]
JMFF018B16Sequence401003291 (19)gb|KJB84163.1|7e-52hypothetical protein B456_N007500 [Gossypium raimondii]767009796 (9)gb|AFR66645.1|3e-105MIP1.1a [Nicotiana benthamiana]
JMFF027E09Sequence544003291 (19)ref|XP_004239737.1|3e-51PREDICTED: dnaJ protein homolog [Solanum lycopersicum]707009796 (9)gb|AFR66645.1|2e-123MIP1.1a [Nicotiana benthamiana]
JMFF029D19Sequence411003291 (19)gb|KJB84163.1|1e-50hypothetical protein B456_N007500 [Gossypium raimondii]746009796 (9)gb|AFR66645.1|2e-96MIP1.1a [Nicotiana benthamiana]
JMFF038O16Sequence494003291 (19)gb|ABG78615.1|5e-48J-domain protein [Triticum aestivum]727009796 (9)gb|AFR66645.1|2e-98MIP1.1a [Nicotiana benthamiana]
JMFF040L01Sequence435003291 (19)gb|AAX95135.1|1e-49DnaJ protein, putative [Oryza sativa Japonica Group] gb|ABF97900.1| DnaJ protein261009796 (9)
JMFF044N24Sequence637003291 (19)gb|KJB84163.1|2e-85hypothetical protein B456_N007500 [Gossypium raimondii]637009796 (9)ref|XP_011032891.1|7e-61PREDICTED: dnaJ protein homolog [Populus euphratica] ref|XP_011032892.1| PREDICT
JMFF044P14Sequence641003291 (19)gb|KJB84163.1|1e-82hypothetical protein B456_N007500 [Gossypium raimondii]618009796 (9)gb|AFR66645.1|3e-92MIP1.1a [Nicotiana benthamiana]

Contig 3291 BLAST Hits against nr-aa DB Show

Contig 9796 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig003291============================================ 730         ============================================Contig009796============================================ 872
 145              ------------------------------------------------------->JMFF018B16                                          <-------------------------------------------------------------------------------------rJMFF018B16  
 145              ------------------------------------------------------->JMFF040L01                                                                                                   <----------------------------rJMFF040L01  
 145              -------------------------------------------------------->JMFF029D19                                          <------------------------------------------------------------------------------------rJMFF029D19  
 145              ------------------------------------------------------------------->JMFF038O16                                 <----------------------------------------------------------------------------------rJMFF038O16  
 145              -------------------------------------------------------------------------->JMFF002N06                       <-------------------------------------------------------------------------------------rJMFF002N06  
 151                      ---------------------------------------------------------------->JMFF044N24                                              <----------------------------------------------------------------------rJMFF044N24  
 278                      ------------------------------------------------------------------>JMFF044P14                             <----------------------------------------------------------------------rJMFF044P14  
 315                      ------------------------------------------------------------->JMFF027E09                    <--------------------------------------------------------------------------------rJMFF027E09  
             ------------------------------------------------------------------------------------------->JMFF042H12*  
        -------------------------------------------------------------------------------------->JMFF004F05*            
            --------------------------------------------------------------------------------->JMFF035F19*             
                       ----------------------------------------------->JMFN008J03-                                    
        ------------------------------------------------------------------------------->JMFF013C04*                   
            ------------------------------------------------------------------->JMFF002M17*                           
     -------------------------------------------------------------------->JMFF038M18*                                 
     ----------------------------------------------------------->JMFF049G23*                                          
            ------------------------------------------------------------------------------->JMFF027P04*               
             ---------------------------------------------------------------->JMFF036M09-                             
     ------------------------------------------------------------------>JMFF015A24*                                   
                                                                                                                                                    ---------------------------------------------------------->JMFN008M10-