List of clones in pair P000183.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001N22Sequence543000689 (16)gb|AHZ89386.1|3e-31beta-amylase 1, partial [Nicotiana tabacum]730000356 (13)ref|XP_009343398.1|6e-99PREDICTED: beta-amylase 1, chloroplastic-like [Pyrus x bretschneideri]
JMFF009F19Sequence563000689 (16)ref|XP_011091372.1|9e-123PREDICTED: beta-amylase 1, chloroplastic [Sesamum indicum]
JMFF034G15Sequence509000689 (16)gb|AAY89374.1|7e-17beta-amylase 1 [Nicotiana langsdorffii x Nicotiana sanderae]734000356 (13)ref|XP_009343398.1|1e-109PREDICTED: beta-amylase 1, chloroplastic-like [Pyrus x bretschneideri]
JMFF036L03Sequence548000689 (16)gb|AHZ89386.1|2e-32beta-amylase 1, partial [Nicotiana tabacum]720000356 (13)ref|XP_009343398.1|6e-96PREDICTED: beta-amylase 1, chloroplastic-like [Pyrus x bretschneideri]
JMFF037O02Sequence736000356 (13)ref|XP_009343398.1|7e-99PREDICTED: beta-amylase 1, chloroplastic-like [Pyrus x bretschneideri]
JMFF040F15Sequence474000689 (16)gb|AAY89374.1|1e-16beta-amylase 1 [Nicotiana langsdorffii x Nicotiana sanderae]748000356 (13)ref|XP_009343398.1|2e-101PREDICTED: beta-amylase 1, chloroplastic-like [Pyrus x bretschneideri]
JMFF042E10Sequence647000689 (16)gb|AHZ89386.1|4e-58beta-amylase 1, partial [Nicotiana tabacum]604000356 (13)ref|XP_009343398.1|3e-79PREDICTED: beta-amylase 1, chloroplastic-like [Pyrus x bretschneideri]
JMFF043B24Sequence618000689 (16)gb|AHZ89386.1|2e-51beta-amylase 1, partial [Nicotiana tabacum]
JMFF044K09Sequence633000689 (16)gb|AHZ89386.1|8e-41beta-amylase 1, partial [Nicotiana tabacum]568000356 (13)ref|XP_002314522.2|4e-53hypothetical protein POPTR_0010s07340g [Populus trichocarpa] gb|EEF00693.2| hypo
JMFF048P21Sequence462000689 (16)gb|AAY89374.1|4e-14beta-amylase 1 [Nicotiana langsdorffii x Nicotiana sanderae]358000356 (13)ref|XP_011091372.1|1e-13PREDICTED: beta-amylase 1, chloroplastic [Sesamum indicum]
JMFN034E15Sequence500000356 (13)gb|EYU43789.1|2e-15hypothetical protein MIMGU_mgv1a010885mg [Erythranthe guttata]
JMFS003A07Sequence525000689 (16)gb|AHZ89386.1|3e-30beta-amylase 1, partial [Nicotiana tabacum]
JMFS003F06Sequence342000356 (13)ref|XP_008438436.1|2e-04PREDICTED: beta-amylase 1, chloroplastic-like [Cucumis melo]
JMFS007E05Sequence603000689 (16)gb|AHZ89386.1|2e-39beta-amylase 1, partial [Nicotiana tabacum]
JMFS015H08Sequence434000689 (16)gb|AAY89374.1|1e-88beta-amylase 1 [Nicotiana langsdorffii x Nicotiana sanderae]
JMFS027D09Sequence584000356 (13)ref|XP_011091372.1|3e-111PREDICTED: beta-amylase 1, chloroplastic [Sesamum indicum]
JMFS086B07Sequence627000689 (16)ref|XP_011091372.1|4e-141PREDICTED: beta-amylase 1, chloroplastic [Sesamum indicum]
JMSF016E07Sequence275000689 (16)739000356 (13)ref|XP_009343398.1|2e-105PREDICTED: beta-amylase 1, chloroplastic-like [Pyrus x bretschneideri]
JMSF017E07Sequence251000689 (16)650000356 (13)ref|XP_009343398.1|2e-106PREDICTED: beta-amylase 1, chloroplastic-like [Pyrus x bretschneideri]

Contig 689 BLAST Hits against nr-aa DB Show

Contig 356 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000689============================================1723         ============================================Contig000356============================================ 926
 143 -------------------------------->JMFF044K09                                                                                                <----------------------------------------------------------rJMFF044K09  
 144 -------------------------->JMFF048P21                                                                                                                              <----------------------------------rJMFF048P21  
 162 --------------------------->JMFF040F15                                                                              <-------------------------------------------------------------------------------rJMFF040F15  
 165 ------------------------------->JMFF036L03                                                                            <-----------------------------------------------------------------------------rJMFF036L03  
 172 ------------------------------->JMFF001N22                                                                           <-----------------------------------------------------------------------------rJMFF001N22  
 185 --------------->JMSF016E07                                                                                        <------------------------------------------------------------------------------rJMSF016E07  
 194  ------------------------------------>JMFF042E10                                                                                 <----------------------------------------------------------------rJMFF042E10  
 212  ----------------------------->JMFF034G15                                                                                     <----------------------------------------------------------------rJMFF034G15  
 279 -------------->JMSF017E07                                                                                        <---------------------------------------------------------------------rJMSF017E07  
                                                 ----------------------------------->JMFS086B07-                      
                                                                               -------------------------->JMCP016A10*  
      ---------------------------------->JMFS007E05-                                                                  
      ------------------------------>JMFS003A07-                                                                      
     ----------------------------------->JMFF043B24-                                                                  
                                                       -------------------------------->JMFF009F19-                   
                             ------------------------>JMFS015H08-                                                     
                                                                                                                                                                    ----------------------------------------------------->JMFN034E15-  
                                                                                                                                                                             <-----------------------------JMFS003F06-  
                                                                                                                           <-----------------------------------------------------------------------------rJMFF037O02- 
                                                                                                                                   ---------------------------------------->JMFS027D09-