List of clones in pair P000143.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002F06Sequence586004489 (9)emb|CDP10212.1|5e-40unnamed protein product [Coffea canephora]723006797 (9)ref|XP_004242572.1|2e-70PREDICTED: protein RTF2 homolog [Solanum lycopersicum]
JMFF005F07Sequence365004489 (9)emb|CDP10212.1|2e-05unnamed protein product [Coffea canephora]711006797 (9)ref|XP_004242572.1|2e-69PREDICTED: protein RTF2 homolog [Solanum lycopersicum]
JMFF008D17Sequence592004489 (9)emb|CDP10212.1|3e-20unnamed protein product [Coffea canephora]774006797 (9)ref|XP_004242572.1|5e-76PREDICTED: protein RTF2 homolog [Solanum lycopersicum]
JMFF009J05Sequence592004489 (9)emb|CDP10212.1|3e-20unnamed protein product [Coffea canephora]749006797 (9)ref|XP_004242572.1|2e-71PREDICTED: protein RTF2 homolog [Solanum lycopersicum]
JMFF010L01Sequence592004489 (9)emb|CDP10212.1|3e-20unnamed protein product [Coffea canephora]675006797 (9)ref|XP_004242572.1|6e-58PREDICTED: protein RTF2 homolog [Solanum lycopersicum]
JMFF018F24Sequence595004489 (9)emb|CDP10212.1|8e-27unnamed protein product [Coffea canephora]790006797 (9)ref|XP_004242572.1|1e-77PREDICTED: protein RTF2 homolog [Solanum lycopersicum]
JMSF010H07Sequence409004489 (9)emb|CDP10212.1|1e-09unnamed protein product [Coffea canephora]748006797 (9)ref|XP_004242572.1|3e-76PREDICTED: protein RTF2 homolog [Solanum lycopersicum]
JMSF021L21Sequence698004489 (9)ref|XP_004242572.1|4e-65PREDICTED: protein RTF2 homolog [Solanum lycopersicum]756006797 (9)ref|XP_004242572.1|1e-77PREDICTED: protein RTF2 homolog [Solanum lycopersicum]
JMSF025L14Sequence667004489 (9)emb|CDP10212.1|9e-41unnamed protein product [Coffea canephora]649006797 (9)ref|XP_009775838.1|2e-51PREDICTED: protein RTF2 homolog [Nicotiana sylvestris]

Contig 4489 BLAST Hits against nr-aa DB Show

Contig 6797 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig004489============================================ 799         ============================================Contig006797============================================ 793
   2 ------------------------------------------------------------------------->JMFF008D17                               <-------------------------------------------------------------------------------------------------rJMFF008D17  
   3 ------------------------------------------------------------------------->JMFF010L01                                            <------------------------------------------------------------------------------------rJMFF010L01  
   4 ------------------------------------------------------------------------->JMFF009J05                                  <----------------------------------------------------------------------------------------------rJMFF009J05  
  13 --------------------------------------------->JMFF005F07                                                                 <-----------------------------------------------------------------------------------------rJMFF005F07  
  30     ------------------------------------------------------------------------->JMFF018F24                         <---------------------------------------------------------------------------------------------------rJMFF018F24  
  48    ---------------------------------------------------------------------------------->JMSF025L14                               <---------------------------------------------------------------------------------rJMSF025L14  
  60     -------------------------------------------------->JMSF010H07                                                  <---------------------------------------------------------------------------------------------rJMSF010H07  
 104              ------------------------------------------------------------------------>JMFF002F06                          <------------------------------------------------------------------------------------------rJMFF002F06  
 130              -------------------------------------------------------------------------------------->JMSF021L21    <-----------------------------------------------------------------------------------------------rJMSF021L21