List of clones in pair P000135.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006A06Sequence591012481 (35)gb|ABF94275.1|5e-120Elongation factor 1-alpha, putative, expressed [Oryza sativa Japonica Group]766008993 (14)gb|AAR83865.1|9e-100elongation factor 1-alpha [Capsicum annuum]
JMFF006C24Sequence575012481 (35)gb|EMT09703.1|8e-87Elongation factor 1-alpha [Aegilops tauschii]750008993 (14)gb|AAR83865.1|5e-95elongation factor 1-alpha [Capsicum annuum]
JMFF016H10Sequence591012481 (35)gb|ABF94275.1|2e-119Elongation factor 1-alpha, putative, expressed [Oryza sativa Japonica Group]734008993 (14)gb|AAR83865.1|4e-93elongation factor 1-alpha [Capsicum annuum]
JMFF026C08Sequence597012481 (35)gb|ABF94275.1|8e-126Elongation factor 1-alpha, putative, expressed [Oryza sativa Japonica Group]740008993 (14)gb|AAF79822.1|AC026875_22e-65T6D22.2 [Arabidopsis thaliana]
JMFF027P11Sequence508012481 (35)gb|EAY88762.1|7e-98hypothetical protein OsI_10238 [Oryza sativa Indica Group]698008993 (14)gb|AAT72900.1|6e-67elongation factor 1A SMV resistance-related protein [Glycine max]
JMFF030F17Sequence567012481 (35)gb|AFW87115.1|8e-114putative translation elongation factor Tu family protein isoform 1 [Zea mays] g705008993 (14)gb|AAR83865.1|4e-100elongation factor 1-alpha [Capsicum annuum]
JMFF035A02Sequence573012481 (35)gb|ACG70967.1|3e-115translation elongation factor 1, partial [Ziziphus jujuba]741008993 (14)gb|AAR83865.1|3e-93elongation factor 1-alpha [Capsicum annuum]
JMFF036F08Sequence639012481 (35)gb|ABF94275.1|2e-138Elongation factor 1-alpha, putative, expressed [Oryza sativa Japonica Group]685008993 (14)ref|XP_009773066.1|8e-84PREDICTED: elongation factor 1-alpha, partial [Nicotiana sylvestris]
JMFF037G17Sequence576012481 (35)gb|AFW87115.1|8e-114putative translation elongation factor Tu family protein isoform 1 [Zea mays] g763008993 (14)gb|AAR83865.1|4e-97elongation factor 1-alpha [Capsicum annuum]
JMSF009I07Sequence319012481 (35)dbj|BAJ91931.1|2e-48predicted protein [Hordeum vulgare subsp. vulgare]752008993 (14)gb|AAR83865.1|4e-97elongation factor 1-alpha [Capsicum annuum]

Contig 12481 BLAST Hits against nr-aa DB Show

Contig 8993 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig012481============================================1735         ============================================Contig008993============================================1467
 698  ---------------------------->JMFF027P11                                                                              <-----------------------------------------------rJMFF027P11  
 698 -------------------------------->JMFF006C24                                                                        <--------------------------------------------------rJMFF006C24  
 700 -------------------------------->JMFF035A02                                                                        <--------------------------------------------------rJMFF035A02  
 701  --------------------------------->JMFF006A06                                                                     <---------------------------------------------------rJMFF006A06  
 702 -------------------------------->JMFF037G17                                                                       <--------------------------------------------------rJMFF037G17  
 711 --------------------------------->JMFF016H10                                                                       <-------------------------------------------------rJMFF016H10  
 712  ----------------->JMSF009I07                                                                                     <--------------------------------------------------rJMSF009I07  
 762 -------------------------------->JMFF030F17                                                                       <-----------------------------------------------rJMFF030F17  
 763     ------------------------------->JMFF026C08                                                                      <-------------------------------------------------rJMFF026C08  
 775     ---------------------------------->JMFF036F08                                                                     <----------------------------------------------rJMFF036F08  
         --------------------------------->JMFN013D19-                                                                
                                                         <-------------------------------------rJMFF018A13*           
                                                            <------------------------------------------rJMSF037E05*   
         -------------------------------->JMFS135E08-                                                                 
                                                       <---------------------------------------rJMFF007H13*           
                                                          <------------------------------------rJMFF013P19*           
                        ---------------------------------->JMFS046C12-                                                
                                  ----------------------------------->JMFS049G01-                                     
                                                         <----------------------------------------rJMFF036F19*        
                                                          <----------------------------------------rJMSF049K21*       
                                                          <------------------------------------rJMFF034B15*           
                                                         <--------------------------------------------rJMFF025C06*    
                                                                         <-------------------------------rJMFF050G15* 
                                                                                    <----------rJMFF008B09*           
                                                               <-------------------------------------rJMFF001P21*     
                                                      <-----------------------------------------rJMFF004G06*          
                                                            <------------------------------------------rJMFF038N03*   
                                                   <--------------------------------------------rJMFF007O02*          
                                                               --------------->JMFN019B22-                            
                                                               --------------------------------->JMFN032E11-          
                                                         <-------------------------------------rJMFF023K11*           
                                                             <-----------------------------------------rJMFF008O20*   
                                                                   <------------------------------------rJMFF015E13*  
            ------>JMFN013D21-                                                                                        
                                                          <--------------------------------------------rJMSF021A20*   
                                                                                                                                                                                  --------------------------------------->JMFS012A05-  
                                                                                                                                                     ------------------------------------>rJMFF041E12* 
                                                                                                                      ------------------------------------------>JMFN013C03-  
                                                                                                                                                                               --------------------------------------->JMFF034J16#