List of clones in pair P000125.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011O10Sequence608005119 (22)ref|XP_009801071.1|4e-38PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]728009830 (11)ref|XP_009801071.1|1e-26PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMFF027H07Sequence548005119 (22)ref|XP_009801071.1|2e-37PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMFF033A21Sequence584005119 (22)ref|XP_009614726.1|1e-39PREDICTED: EIN3-binding F-box protein 1-like [Nicotiana tomentosiformis]
JMFF034E15Sequence551005119 (22)ref|XP_009801071.1|3e-39PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMFF047C15Sequence503005119 (22)ref|XP_009801071.1|2e-13PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]384009830 (11)
JMFF048A01Sequence565005119 (22)ref|XP_009801071.1|1e-28PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]538009830 (11)ref|XP_009801071.1|9e-05PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMFS001B01Sequence530009830 (11)ref|XP_009801071.1|1e-07PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMFS024E03Sequence601005119 (22)ref|XP_009614726.1|1e-40PREDICTED: EIN3-binding F-box protein 1-like [Nicotiana tomentosiformis]
JMFS039A04Sequence627005119 (22)ref|XP_009614726.1|2e-40PREDICTED: EIN3-binding F-box protein 1-like [Nicotiana tomentosiformis]
JMFS039H08Sequence591005119 (22)ref|XP_009801071.1|5e-39PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMFS051A03Sequence629005119 (22)ref|XP_009614726.1|3e-39PREDICTED: EIN3-binding F-box protein 1-like [Nicotiana tomentosiformis]
JMFS085C12Sequence613005119 (22)ref|XP_009614726.1|1e-39PREDICTED: EIN3-binding F-box protein 1-like [Nicotiana tomentosiformis]
JMFS108G06Sequence627005119 (22)ref|XP_009801071.1|6e-46PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMFS121F03Sequence553005119 (22)ref|XP_009614726.1|5e-40PREDICTED: EIN3-binding F-box protein 1-like [Nicotiana tomentosiformis]
JMSF002E09Sequence427005119 (22)646009830 (11)ref|XP_009801071.1|2e-26PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMSF011K06Sequence399005119 (22)ref|XP_002324298.2|8e-04hypothetical protein POPTR_0018s01710g [Populus trichocarpa] gb|EEF02863.2| hypo702009830 (11)ref|XP_009801071.1|4e-36PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMSF015A19Sequence273005119 (22)711009830 (11)ref|XP_009801071.1|1e-36PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMSF027D17Sequence671005119 (22)ref|XP_009801071.1|2e-36PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMSF027F08Sequence623005119 (22)ref|XP_009614726.1|2e-41PREDICTED: EIN3-binding F-box protein 1-like [Nicotiana tomentosiformis]772009830 (11)ref|XP_009801071.1|3e-41PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMSF027I20Sequence614005119 (22)ref|XP_009801071.1|5e-39PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]793009830 (11)ref|XP_009801071.1|3e-46PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMSF045J22Sequence759005119 (22)ref|XP_009614726.1|6e-39PREDICTED: EIN3-binding F-box protein 1-like [Nicotiana tomentosiformis]704009830 (11)ref|XP_009801071.1|5e-30PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMSF049G15Sequence680005119 (22)ref|XP_009614726.1|7e-39PREDICTED: EIN3-binding F-box protein 1-like [Nicotiana tomentosiformis]777009830 (11)ref|XP_009801071.1|9e-43PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]

Contig 5119 BLAST Hits against nr-aa DB Show

Contig 9830 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig005119============================================ 902         ============================================Contig009830============================================ 859
  64        -------------------------------------------------------------->JMFF048A01                                                                      <--------------------------------------------------------------rJMFF048A01  
  90  ---------------------------------------------->JMSF002E09                                                                        <------------------------------------------------------------------------rJMSF002E09  
  98        ------------------------------------------------------->JMFF047C15                                                                                            <-------------------------------------------rJMFF047C15  
 112        ------------------------------------------------------------------->JMFF011O10                                     <------------------------------------------------------------------------------------rJMFF011O10  
 128        ------------------------------------------------------------------->JMSF027I20                            <--------------------------------------------------------------------------------------------rJMSF027I20  
 129        ----------------------------->JMSF015A19                                                                           <----------------------------------------------------------------------------------rJMSF015A19  
 131        -------------------------------------------------------------------------->JMSF049G15                         <---------------------------------------------------------------------------------------rJMSF049G15  
 131        ----------------------------------------------------------------------------------->JMSF045J22                      <---------------------------------------------------------------------------------rJMSF045J22  
 132        ------------------------------------------->JMSF011K06                                                              <---------------------------------------------------------------------------------rJMSF011K06  
 217                -------------------------------------------------------------------->JMSF027F08                       <-------------------------------------------------------------------------------------rJMSF027F08  
                   ------------------------------------------------------------>JMFF034E15-                           
                      ------------------------------------------------------------------>JMFS024E03-                  
                   ---------------------------------------------------------------->JMFF033A21-                       
                    ----------------------------------------------------------------->JMFS051A03-                     
                   --------------------------------------------->JMFF024J14#                                          
              ------------------------------------------------------------------->JMFS085C12-                         
                    ------------------------------------------------------------->JMFS121F03-                         
     -------------------------------------------------------------------------->JMSF027D17-                           
                    --------------------------------------------------------------------->JMFS039A04-                 
                   ------------------------------------------------------------>JMFF027H07-                           
              ----------------------------------------------------------------->JMFS039H08-                           
                                   --------------------------------------------------------------------->JMFS108G06-  
                                                                                                                                                        ------------------------------------------------------------->JMFS001B01-