List of clones in pair P000124.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010J22Sequence563009046 (25)ref|XP_002515516.1|9e-45grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R727002700 (28)ref|XP_009614726.1|1e-49PREDICTED: EIN3-binding F-box protein 1-like [Nicotiana tomentosiformis]
JMFF015J02Sequence558002700 (28)ref|XP_009801071.1|2e-55PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]632002700 (28)ref|XP_010696236.1|2e-32PREDICTED: EIN3-binding F-box protein 1 [Beta vulgaris subsp. vulgaris]
JMFF020K01Sequence623002700 (28)ref|XP_010696236.1|7e-33PREDICTED: EIN3-binding F-box protein 1 [Beta vulgaris subsp. vulgaris]
JMFF021M09Sequence570009046 (25)ref|XP_002515516.1|6e-45grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R593002700 (28)ref|XP_009614726.1|2e-22PREDICTED: EIN3-binding F-box protein 1-like [Nicotiana tomentosiformis]
JMFF034H15Sequence604002700 (28)ref|XP_010696236.1|1e-28PREDICTED: EIN3-binding F-box protein 1 [Beta vulgaris subsp. vulgaris]
JMFF037K12Sequence587009046 (25)ref|XP_002515516.1|3e-44grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R
JMFF039E22Sequence631002700 (28)ref|XP_009801071.1|4e-55PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]735002700 (28)ref|XP_009614726.1|2e-48PREDICTED: EIN3-binding F-box protein 1-like [Nicotiana tomentosiformis]
JMFF039F16Sequence477002700 (28)ref|XP_009801071.1|6e-56PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]278002700 (28)ref|XP_007204219.1|2e-04hypothetical protein PRUPE_ppa003009mg [Prunus persica] gb|EMJ05418.1| hypotheti
JMFF042I04Sequence653009046 (25)ref|XP_002515516.1|8e-45grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R593002700 (28)ref|XP_010048202.1|6e-25PREDICTED: EIN3-binding F-box protein 1-like [Eucalyptus grandis] gb|KCW80383.1|
JMFF044M02Sequence648009046 (25)ref|XP_009614726.1|7e-84PREDICTED: EIN3-binding F-box protein 1-like [Nicotiana tomentosiformis]599002700 (28)ref|XP_010048202.1|4e-21PREDICTED: EIN3-binding F-box protein 1-like [Eucalyptus grandis] gb|KCW80383.1|
JMFF046M11Sequence649009046 (25)ref|XP_002515516.1|5e-36grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R446002700 (28)ref|XP_007204219.1|4e-04hypothetical protein PRUPE_ppa003009mg [Prunus persica] gb|EMJ05418.1| hypotheti
JMFF048M07Sequence447009046 (25)ref|XP_002515516.1|1e-27grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R360002700 (28)
JMFN011F07Sequence503002700 (28)ref|XP_009614726.1|1e-16PREDICTED: EIN3-binding F-box protein 1-like [Nicotiana tomentosiformis]
JMFN029H05Sequence617002700 (28)ref|XP_010048202.1|2e-25PREDICTED: EIN3-binding F-box protein 1-like [Eucalyptus grandis] gb|KCW80383.1|
JMFN031K17Sequence612002700 (28)emb|CDP13516.1|2e-84unnamed protein product [Coffea canephora]
JMFN039N07Sequence627002700 (28)ref|XP_009801071.1|8e-78PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMFN039N09Sequence625002700 (28)ref|XP_010696236.1|2e-32PREDICTED: EIN3-binding F-box protein 1 [Beta vulgaris subsp. vulgaris]
JMFN041D18Sequence629002700 (28)ref|XP_010696236.1|2e-32PREDICTED: EIN3-binding F-box protein 1 [Beta vulgaris subsp. vulgaris]
JMFN041F23Sequence624002700 (28)ref|XP_010696236.1|3e-31PREDICTED: EIN3-binding F-box protein 1 [Beta vulgaris subsp. vulgaris]
JMFS036A03Sequence568009046 (25)ref|XP_002515516.1|5e-45grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R
JMFS048B07Sequence293009046 (25)
JMFS060H08Sequence622009046 (25)ref|XP_002515516.1|7e-33grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R
JMFS064G11Sequence557009046 (25)ref|XP_002515516.1|4e-43grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R
JMFS068C04Sequence612009046 (25)ref|XP_002515516.1|2e-43grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R
JMFS077H03Sequence645009046 (25)ref|XP_002515516.1|6e-44grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R
JMFS087B01Sequence627002700 (28)ref|XP_009801071.1|5e-92PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMFS092D08Sequence611009046 (25)ref|XP_002515516.1|1e-44grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R
JMFS103B11Sequence602002700 (28)ref|XP_009614726.1|2e-44PREDICTED: EIN3-binding F-box protein 1-like [Nicotiana tomentosiformis]
JMFS108H09Sequence618009046 (25)ref|XP_002515516.1|1e-44grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R
JMFS112G01Sequence617009046 (25)ref|XP_002515516.1|3e-44grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R
JMFS112H08Sequence614009046 (25)ref|XP_002515516.1|2e-44grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R
JMFS117A09Sequence567009046 (25)ref|XP_002515516.1|4e-42grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R
JMFS155C12Sequence577009046 (25)ref|XP_002515516.1|6e-45grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R
JMSF005A17Sequence244009046 (25)
JMSF005A19Sequence325002700 (28)
JMSF008O23Sequence304009046 (25)730002700 (28)ref|XP_009801071.1|3e-54PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMSF013P19Sequence267009046 (25)
JMSF033P11Sequence619009046 (25)ref|XP_002515516.1|9e-45grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R724002700 (28)ref|XP_009801071.1|4e-51PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMSF037P20Sequence622009046 (25)ref|XP_002515516.1|8e-45grr1, plant, putative [Ricinus communis] gb|EEF46965.1| grr1, plant, putative [R719002700 (28)ref|XP_009801071.1|4e-50PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris]
JMSF046L15Sequence473009046 (25)gb|KHG28503.1|2e-14EIN3-binding F-box 1 -like protein [Gossypium arboreum]628002700 (28)ref|XP_010696236.1|1e-32PREDICTED: EIN3-binding F-box protein 1 [Beta vulgaris subsp. vulgaris]

Contig 9046 BLAST Hits against nr-aa DB Show

Contig 2700 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig009046============================================1194         ============================================Contig002700============================================1445
 155              ------------------------------------->JMFF048M07                                                                                                                               <------------------------rJMFF048M07  
 155              ------------------------------------------------------>JMFF046M11                                                                                                        <------------------------------rJMFF046M11  
 157           ------------------------------------------------------>JMFF042I04                                                                                              <----------------------------------------rJMFF042I04  
 172        -------------------------------------->JMSF046L15                                                                                                          <-------------------------------------------rJMSF046L15  
 187          --------------------------------------------------->JMSF037P20                                                                                       <-------------------------------------------------rJMSF037P20  
 195           --------------------------------------------------->JMSF033P11                                                                                      <-------------------------------------------------rJMSF033P11  
 219              ---------------------------------------------->JMFF010J22                                                                                        <--------------------------------------------------rJMFF010J22  
 232           ----------------------->JMSF008O23                                                                                                                 <------------------------------------------------rJMSF008O23  
 235              ----------------------------------------------->JMFF021M09                                                                                                <---------------------------------------rJMFF021M09  
 552                                               ----------------------------------------------------->JMFF044M02                                                             <-----------------------------------------rJMFF044M02  
      --------------------->JMSF013P19-                                                                               
                 ----------------------------------------------->JMFS155C12-                                          
               ------------------------------------------------>JMFF037K12-                                           
              -------------------->JMSF005A17-                                                                        
                  ----------------------------------------------->JMFS036A03-                                         
                ----------------------------------------------->JMFS117A09-                                           
                --------------------------------------------------->JMFS108H09-                                       
                --------------------------------------------------->JMFS112G01-                                       
     --------------------------------------------------->JMFS060H08-                                                  
                ------------------------>JMFS048B07-                                                                  
                 -------------------------------------------------->JMFS068C04-                                       
                 -------------------------------------------------->JMFS092D08-                                       
                 ---------------------------------------------->JMFS064G11-                                           
                 ----------------------------------------------------->JMFS077H03-                                    
                 -------------------------------------------------->JMFS112H08-                                       
                                                                                                                                                                              ----------------------------------------->JMFN029H05-  
                                                                                                                                              ------------------------------------------>JMFN039N07-  
                                                                                                                                                                          ---------------------------------------->JMFN041F23-  
                                                                                                                                                                          ------------------------------------------->JMFN041D18-  
                                                                                                                                                                                    ---------------------------------->JMFN011F07-  
                                                                                                                      ------------------------------------------>JMFS087B01-  
                                                                                                                                                                                            <----------------------rJMSF005A19- 
                                                                                                                                                                            <-----------------------------------------rJMFF034H15- 
                                                                                                                                       ----------------------------------------->JMFN031K17-  
                                                                                                                                                                          <------------------------------------------rJMFF020K01- 
                                                                                                                                                                          ------------------------------------------>JMFN039N09-  
                                                                                                                                                                     ----------------------------------------->JMFS103B11-  
                                                                                                                                                                    <-------------------------------------------------rJMFF039E22**
                                                                                                                                                                 -------------------------------->JMFF039F16**
                                                                                                                                                                                           <------------------rJMFF039F16**
                                                                                                                                                                 -------------------------------------->JMFF015J02**
                                                                                                                                                                          <-------------------------------------------rJMFF015J02**
                                                                                                                                                                 ------------------------------------------->JMFF039E22**