List of clones in pair P000094.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001J14Sequence592003201 (12)ref|XP_009770420.1|7e-106PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr675012266 (13)gb|ABR25526.1|1e-11526S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF011E12Sequence617003201 (12)ref|XP_009770420.1|7e-108PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr727012266 (13)gb|ABR25526.1|5e-12326S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF011L16Sequence555003201 (12)ref|XP_009770420.1|2e-91PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr749012266 (13)gb|ABR25526.1|4e-13126S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF014B02Sequence598003201 (12)ref|XP_009770420.1|9e-71PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr301012266 (13)
JMFF019A06Sequence546003201 (12)ref|XP_009599866.1|3e-87PREDICTED: 26S protease regulatory subunit 8 homolog A [Nicotiana tomentosiform772012266 (13)gb|ABR25526.1|2e-12026S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF019H15Sequence559003201 (12)ref|XP_009770420.1|2e-91PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr716012266 (13)gb|ABR25526.1|6e-12326S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF023B16Sequence505003201 (12)ref|XP_009770420.1|6e-83PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr733012266 (13)gb|AFW66097.1|2e-93hypothetical protein ZEAMMB73_419750 [Zea mays]
JMFF030L04Sequence473003201 (12)ref|XP_009770420.1|7e-64PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr601012266 (13)gb|AFW66097.1|9e-101hypothetical protein ZEAMMB73_419750 [Zea mays]
JMFF031D08Sequence589003201 (12)ref|XP_009770420.1|4e-100PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr678012266 (13)gb|ABR25526.1|1e-10726S protease regulatory subunit 8 [Oryza sativa Indica Group]
JMFF041K02Sequence644003201 (12)ref|XP_009770420.1|7e-114PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr
JMFF048F19Sequence431003201 (12)ref|XP_009770420.1|7e-58PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr218012266 (13)
JMFF049F23Sequence644003201 (12)ref|XP_009770420.1|2e-115PREDICTED: 26S protease regulatory subunit 8 homolog A-like [Nicotiana sylvestr588012266 (13)gb|AFW66097.1|6e-63hypothetical protein ZEAMMB73_419750 [Zea mays]
JMFN005L16Sequence481012266 (13)ref|XP_002285273.1|1e-35PREDICTED: 26S protease regulatory subunit 8 homolog A [Vitis vinifera] emb|CBI
JMFN028N22Sequence535012266 (13)ref|XP_010420829.1|7e-50PREDICTED: 26S protease regulatory subunit 8 homolog B-like [Camelina sativa]

Contig 3201 BLAST Hits against nr-aa DB Show

Contig 12266 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig003201============================================ 666         ============================================Contig012266============================================ 886
   4 ----------------------------------------------------------------------------------------->JMFF014B02                                                                               <---------------------------------rJMFF014B02  
  27    --------------------------------------------------------------------------->JMFF023B16                                        <----------------------------------------------------------------------------------rJMFF023B16  
  55    ---------------------------------------------------------------------------------------------->JMFF049F23                                   <-----------------------------------------------------------------rJMFF049F23  
 116 ---------------------------------------------------------------->JMFF048F19                                                                                                     <-----------------------rJMFF048F19  
 131  ---------------------------------------------------------------------------------------->JMFF031D08                       <---------------------------------------------------------------------------rJMFF031D08  
 133  -------------------------------------------------------------------------------------------->JMFF011E12             <---------------------------------------------------------------------------------rJMFF011E12  
 140           --------------------------------------------------------------------------------->JMFF019A06                <--------------------------------------------------------------------------------------rJMFF019A06  
 140  ----------------------------------------------------------------------------------->JMFF011L16                  <------------------------------------------------------------------------------------rJMFF011L16  
 141 ----------------------------------------------------------------------------------->JMFF019H15                      <--------------------------------------------------------------------------------rJMFF019H15  
 169 -------------------------------------------------------------------->JMFF030L04                                               <-------------------------------------------------------------------rJMFF030L04  
 171    ---------------------------------------------------------------------------------------->JMFF001J14                  <---------------------------------------------------------------------------rJMFF001J14  
        ------------------------------------------------------------------------------------------------>JMFF041K02-  
                                                                                                                                                         ------------------------------------------------------------>JMFN028N22-  
                                                                                                                                                          ----------------------------------------------------->JMFN005L16-