List of clones in pair P000088.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008O19Sequence500006093 (13)ref|XP_009795723.1|3e-47PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri694013635 (15)ref|XP_010099378.1|3e-107Ketol-acid reductoisomerase [Morus notabilis] gb|EXB78103.1| Ketol-acid reductoi
JMFF021L18Sequence462006093 (13)ref|XP_009795723.1|3e-39PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri577013635 (15)ref|XP_010099378.1|1e-81Ketol-acid reductoisomerase [Morus notabilis] gb|EXB78103.1| Ketol-acid reductoi
JMFF028D06Sequence492006093 (13)ref|XP_009795723.1|2e-45PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri747013635 (15)dbj|BAD94384.1|9e-116ketol-acid reductoisomerase [Arabidopsis thaliana]
JMFF028L03Sequence475006093 (13)ref|XP_009795723.1|9e-35PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri689013635 (15)emb|CBI21968.3|2e-116unnamed protein product [Vitis vinifera]
JMFF029E18Sequence503006093 (13)ref|XP_009795723.1|4e-47PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri554013635 (15)ref|XP_010099378.1|8e-73Ketol-acid reductoisomerase [Morus notabilis] gb|EXB78103.1| Ketol-acid reductoi
JMFF032I03Sequence723013635 (15)emb|CBI21968.3|5e-114unnamed protein product [Vitis vinifera]
JMFF034K10Sequence474006093 (13)ref|XP_009795723.1|5e-35PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri678013635 (15)ref|XP_010099378.1|1e-110Ketol-acid reductoisomerase [Morus notabilis] gb|EXB78103.1| Ketol-acid reductoi
JMFF036A03Sequence532006093 (13)ref|XP_009795723.1|1e-54PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri701013635 (15)dbj|BAD94384.1|9e-113ketol-acid reductoisomerase [Arabidopsis thaliana]
JMFF040N12Sequence563006093 (13)ref|XP_009795723.1|5e-60PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri793013635 (15)ref|XP_002280094.1|7e-132PREDICTED: ketol-acid reductoisomerase, chloroplastic [Vitis vinifera] emb|CAN6
JMFF045F24Sequence626006093 (13)ref|XP_008353740.1|3e-75PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Malus domestica]578013635 (15)ref|XP_010099378.1|1e-77Ketol-acid reductoisomerase [Morus notabilis] gb|EXB78103.1| Ketol-acid reductoi
JMFF048B18Sequence365006093 (13)ref|XP_009795723.1|5e-15PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri293013635 (15)ref|XP_010099378.1|3e-08Ketol-acid reductoisomerase [Morus notabilis] gb|EXB78103.1| Ketol-acid reductoi
JMFN030A10Sequence600013635 (15)emb|CBI21968.3|7e-132unnamed protein product [Vitis vinifera]
JMFN030L07Sequence620013635 (15)emb|CBI21968.3|2e-134unnamed protein product [Vitis vinifera]
JMFS099B09Sequence618006093 (13)ref|XP_008353740.1|1e-75PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Malus domestica]
JMFS114F04Sequence560006093 (13)ref|XP_009795723.1|3e-63PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri
JMSF023B21Sequence653006093 (13)ref|XP_008353740.1|4e-78PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Malus domestica]761013635 (15)emb|CDY49236.1|4e-131BnaA09g55150D [Brassica napus]

Contig 6093 BLAST Hits against nr-aa DB Show

Contig 13635 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig006093============================================ 655         ============================================Contig013635============================================ 870
  12   --------------------------------------------------------------------------->JMFF008O19                                             <-------------------------------------------------------------------------------rJMFF008O19  
  17   -------------------------------------------------------------------------->JMFF028D06                                       <-------------------------------------------------------------------------------------rJMFF028D06  
  21   ----------------------------------------------------------------------------------------------->JMFF045F24                                      <-----------------------------------------------------------------rJMFF045F24  
  24 ------------------------------------------------------->JMFF048B18                                                                                                              <---------------------------------rJMFF048B18  
  30  ---------------------------------------------------------------------->JMFF021L18                                                              <-----------------------------------------------------------------rJMFF021L18  
  34  ---------------------------------------------------------------------------->JMFF029E18                                                           <--------------------------------------------------------------rJMFF029E18  
  42   ----------------------------------------------------------------------->JMFF034K10                                                <-----------------------------------------------------------------------------rJMFF034K10  
  43   ------------------------------------------------------------------------------------->JMFF040N12                    <------------------------------------------------------------------------------------------rJMFF040N12  
  50   -------------------------------------------------------------------------------->JMFF036A03                                   <--------------------------------------------------------------------------------rJMFF036A03  
  58  -------------------------------------------------------------------------------------------------->JMSF023B21          <--------------------------------------------------------------------------------------rJMSF023B21  
  72   ------------------------------------------------------------------------>JMFF028L03                                          <------------------------------------------------------------------------------rJMFF028L03  
         ------------------------------------------------------------------------------------->JMFS114F04-            
         --------------------------------------------------------------------------------------------->JMFS099B09-    
                                                                                                                      <--------------------------------------------------------------------rJMSF018H22* 
                                                                                                                                    <----------------------------------------------------------------------------------rJMFF032I03- 
                                                                                                                          --------------------------------------------------------------------->JMFN030L07-  
                                                                                                                          -------------------------------------------------------------------->JMFN030A10-