List of clones in pair P000085.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007A11Sequence581002415 (13)emb|CDP03161.1|4e-78unnamed protein product [Coffea canephora]785005500 (15)gb|ABB54381.2|5e-121FVE [Ipomoea nil]
JMFF016M02Sequence623002415 (13)emb|CDP03161.1|2e-87unnamed protein product [Coffea canephora]798005500 (15)gb|ABB54381.2|9e-109FVE [Ipomoea nil]
JMFF024C16Sequence516002415 (13)emb|CDP03161.1|2e-56unnamed protein product [Coffea canephora]775005500 (15)gb|ABB54381.2|4e-130FVE [Ipomoea nil]
JMFF025N12Sequence817005500 (15)gb|ABB54381.2|3e-113FVE [Ipomoea nil]
JMFF027E02Sequence611002415 (13)emb|CDP03161.1|9e-87unnamed protein product [Coffea canephora]749005500 (15)gb|ABB54381.2|1e-113FVE [Ipomoea nil]
JMFF032B09Sequence513005500 (15)gb|ABB54381.2|1e-104FVE [Ipomoea nil]708005500 (15)gb|ABB54381.2|1e-83FVE [Ipomoea nil]
JMFF041N20Sequence658002415 (13)emb|CDP03161.1|1e-89unnamed protein product [Coffea canephora]594005500 (15)gb|ABB54381.2|1e-75FVE [Ipomoea nil]
JMFF042N08Sequence634002415 (13)emb|CDP03161.1|1e-73unnamed protein product [Coffea canephora]582005500 (15)gb|ABB54381.2|1e-47FVE [Ipomoea nil]
JMFF042N14Sequence635002415 (13)emb|CDP03161.1|2e-79unnamed protein product [Coffea canephora]466005500 (15)gb|ABB54381.2|3e-19FVE [Ipomoea nil]
JMFF049C24Sequence641002415 (13)emb|CDP03161.1|3e-66unnamed protein product [Coffea canephora]457005500 (15)gb|ABB54381.2|1e-31FVE [Ipomoea nil]
JMFN039D23Sequence472005500 (15)gb|ABB54381.2|9e-44FVE [Ipomoea nil]
JMFS028A04Sequence644002415 (13)emb|CDP03161.1|4e-96unnamed protein product [Coffea canephora]
JMSF034M20Sequence683002415 (13)emb|CDP03161.1|3e-104unnamed protein product [Coffea canephora]
JMSF035G13Sequence707002415 (13)emb|CDP03161.1|5e-110unnamed protein product [Coffea canephora]779005500 (15)gb|ABB54381.2|2e-132FVE [Ipomoea nil]
JMSF040K15Sequence617002415 (13)emb|CDP03161.1|3e-65unnamed protein product [Coffea canephora]860005500 (15)gb|ABB54381.2|8e-117FVE [Ipomoea nil]
JMSF043M18Sequence749002415 (13)emb|CDP03161.1|3e-95unnamed protein product [Coffea canephora]741005500 (15)gb|ABB54381.2|2e-115FVE [Ipomoea nil]

Contig 2415 BLAST Hits against nr-aa DB Show

Contig 5500 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig002415============================================ 807         ============================================Contig005500============================================ 908
  27    ------------------------------------------------------------------------------>JMFF042N08                                                         <---------------------------------------------------------------rJMFF042N08  
  29  ------------------------------------------------------------------------------->JMFF049C24                                                                      <-------------------------------------------------rJMFF049C24  
  45      ------------------------------------------------------------------------------>JMFF042N14                                                                  <---------------------------------------------------rJMFF042N14  
  51 --------------------------------------------------------------------------->JMSF040K15                           <---------------------------------------------------------------------------------------------rJMSF040K15  
 102           ---------------------------------------------------------------------------->JMFF016M02                          <---------------------------------------------------------------------------------------rJMFF016M02  
 104 -------------------------------------------------------------------------------------------->JMSF043M18                 <---------------------------------------------------------------------------------rJMSF043M18  
 181            ------------------------------------------------------------------------------>JMFF041N20                                    <-----------------------------------------------------------------rJMFF041N20  
 185             ---------------------------------------------------------------------->JMFF007A11                          <-----------------------------------------------------------------------------------rJMFF007A11  
 187             -------------------------------------------------------------------------->JMFF027E02                       <----------------------------------------------------------------------------------rJMFF027E02  
 190         --------------------------------------------------------------->JMFF024C16                                <------------------------------------------------------------------------------------rJMFF024C16  
 245              -------------------------------------------------------------------------------------->JMSF035G13   <-----------------------------------------------------------------------------------rJMSF035G13  
                  ------------------------------------------------------------------------------->JMFS028A04-         
                  ----------------------------------------------------------------------------------->JMSF034M20-     
                                                                                                                                                           --------------------------------------------------->JMFN039D23-  
                                                                                                                              <-----------------------------------------------------------------------------------------rJMFF025N12- 
                                                                                                                                          <-----------------------------------------------------------------------------rJMFF032B09**
                                                                                                                               ------------------------------------------------------->JMFF032B09**