List of clones in pair P000070.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018B05Sequence580006594 (14)ref|XP_010266868.1|9e-52PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Nelumbo nuc755008312 (15)ref|XP_011092961.1|4e-82PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Sesamum ind
JMFF018G01Sequence565006594 (14)ref|XP_010266868.1|2e-70PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Nelumbo nuc686008312 (15)ref|XP_011092961.1|2e-89PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Sesamum ind
JMFF022M15Sequence793008312 (15)ref|XP_011092961.1|6e-98PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Sesamum ind
JMFF027N19Sequence572006594 (14)ref|XP_010266868.1|1e-53PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Nelumbo nuc695008312 (15)ref|XP_011092961.1|2e-91PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Sesamum ind
JMFF039B13Sequence497008312 (15)ref|XP_004153753.1|6e-34PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3-like, partia
JMFF042H01Sequence628006594 (14)sp|P93768.1|PSMD3_TOBAC3e-76RecName: Full=Probable 26S proteasome non-ATPase regulatory subunit 3; Short=26631008312 (15)ref|XP_011092961.1|8e-52PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Sesamum ind
JMFF046H13Sequence504006594 (14)ref|XP_010266868.1|6e-55PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Nelumbo nuc453008312 (15)gb|AFK34954.1|1e-16unknown [Lotus japonicus]
JMFN007P02Sequence608006594 (14)ref|XP_010266868.1|8e-82PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Nelumbo nuc
JMSF011G09Sequence440006594 (14)ref|XP_009773689.1|2e-38PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 isoform X1 [731008312 (15)ref|XP_011092961.1|3e-114PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Sesamum ind
JMSF018P05Sequence510006594 (14)ref|XP_010266868.1|6e-55PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Nelumbo nuc773008312 (15)ref|XP_011092961.1|1e-107PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Sesamum ind
JMSF022D16Sequence642006594 (14)ref|XP_010266868.1|9e-81PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Nelumbo nuc754008312 (15)ref|XP_011092961.1|4e-113PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Sesamum ind
JMSF033H22Sequence665006594 (14)ref|XP_010266868.1|1e-80PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Nelumbo nuc756008312 (15)ref|XP_011092961.1|4e-98PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Sesamum ind
JMSF041G20Sequence720006594 (14)ref|XP_010266868.1|7e-94PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Nelumbo nuc
JMSF042H22Sequence772006594 (14)ref|XP_010266868.1|8e-98PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Nelumbo nuc756008312 (15)ref|XP_011092961.1|8e-105PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Sesamum ind
JMSF045M12Sequence764006594 (14)ref|XP_010266868.1|9e-98PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Nelumbo nuc734008312 (15)ref|XP_011092961.1|5e-115PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Sesamum ind
JMSF053I11Sequence709006594 (14)ref|XP_010266868.1|4e-84PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Nelumbo nuc942008312 (15)ref|XP_011092961.1|2e-169PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Sesamum ind

Contig 6594 BLAST Hits against nr-aa DB Show

Contig 8312 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig006594============================================ 790         ============================================Contig008312============================================1099
  27    ------------------------------------------------------------------------------>JMFF042H01                                                               <---------------------------------------------------------rJMFF042H01  
  50   --------------------------------------------------------------->JMFF046H13                                                                                              <---------------------------------------rJMFF046H13  
  72 ----------------------------------------------------------------------------------->JMSF033H22                                            <--------------------------------------------------------------------rJMSF033H22  
 114  ------------------------------------------------------------------------>JMFF018B05                                                  <--------------------------------------------------------------------rJMFF018B05  
 124   ---------------------------------------------------------------->JMSF018P05                                                       <----------------------------------------------------------------------rJMSF018P05  
 126   ----------------------------------------------------------------------->JMFF027N19                                                        <--------------------------------------------------------------rJMFF027N19  
 134    ----------------------------------------------------------------------->JMFF018G01                                                       <--------------------------------------------------------------rJMFF018G01  
 152    ------------------------------------------------------------------------------------------------->JMSF042H22                      <--------------------------------------------------------------------rJMSF042H22  
 157    -------------------------------------------------------------------------------->JMSF022D16                                      <--------------------------------------------------------------------rJMSF022D16  
 168  ------------------------------------------------------>JMSF011G09                                                                  <-----------------------------------------------------------------rJMSF011G09  
 177    ------------------------------------------------------------------------------------------------>JMSF045M12                      <------------------------------------------------------------------rJMSF045M12  
 178    ----------------------------------------------------------------------------------------->JMSF053I11          <-------------------------------------------------------------------------------------rJMSF053I11  
      ------------------------------------------------------------------------------------------>JMSF041G20-          
             ---------------------------------------------------------------------------->JMFN007P02-                 
                                                                                                                                                                   <-------------------------------------------rJMFF039B13- 
                                                                                                                                            <-----------------------------------------------------------------------rJMFF022M15- 
                                                                                                                                          <------------rJMSF033D19*