List of clones in pair P000069.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015L19Sequence585000846 (14)ref|XP_009798338.1|3e-34PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Nicotiana sylvestris]622013673 (12)ref|XP_006468698.1|3e-26PREDICTED: zinc finger protein CONSTANS-LIKE 16-like [Citrus sinensis] gb|KDO76
JMSF001H24Sequence283000846 (14)752013673 (12)ref|XP_007044348.1|2e-45B-box type zinc finger protein with CCT domain, putative [Theobroma cacao] gb|E
JMSF003I08Sequence327000846 (14)ref|XP_009798338.1|1e-07PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Nicotiana sylvestris]787013673 (12)ref|XP_007044348.1|2e-45B-box type zinc finger protein with CCT domain, putative [Theobroma cacao] gb|E
JMSF012A02Sequence477000846 (14)ref|XP_009798338.1|1e-27PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Nicotiana sylvestris]661013673 (12)ref|XP_007044348.1|2e-40B-box type zinc finger protein with CCT domain, putative [Theobroma cacao] gb|E
JMSF014E09Sequence267000846 (14)720013673 (12)ref|XP_007044348.1|2e-43B-box type zinc finger protein with CCT domain, putative [Theobroma cacao] gb|E
JMSF022F24Sequence638000846 (14)ref|XP_009798338.1|1e-37PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Nicotiana sylvestris]747013673 (12)ref|XP_007044348.1|8e-45B-box type zinc finger protein with CCT domain, putative [Theobroma cacao] gb|E
JMSF027O04Sequence637000846 (14)ref|XP_009798338.1|2e-37PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Nicotiana sylvestris]686013673 (12)ref|XP_007044348.1|1e-45B-box type zinc finger protein with CCT domain, putative [Theobroma cacao] gb|E
JMSF028P14Sequence623000846 (14)ref|XP_009798338.1|8e-36PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Nicotiana sylvestris]710013673 (12)ref|XP_009603861.1|3e-55PREDICTED: zinc finger protein CONSTANS-LIKE 16-like [Nicotiana tomentosiformis
JMSF033E24Sequence687000846 (14)ref|XP_007036519.1|3e-41Transcription factor, putative [Theobroma cacao] gb|EOY21020.1| Transcription fa746013673 (12)ref|XP_007044348.1|3e-44B-box type zinc finger protein with CCT domain, putative [Theobroma cacao] gb|E
JMSF033N13Sequence639000846 (14)ref|XP_009798338.1|7e-37PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Nicotiana sylvestris]652013673 (12)ref|XP_006468698.1|2e-20PREDICTED: zinc finger protein CONSTANS-LIKE 16-like [Citrus sinensis] gb|KDO76
JMSF035K10Sequence638000846 (14)ref|XP_009798338.1|7e-37PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Nicotiana sylvestris]
JMSF042C10Sequence750000846 (14)ref|XP_007036519.1|6e-41Transcription factor, putative [Theobroma cacao] gb|EOY21020.1| Transcription fa795013673 (12)ref|XP_007044348.1|3e-45B-box type zinc finger protein with CCT domain, putative [Theobroma cacao] gb|E
JMSF052D13Sequence697000846 (14)ref|XP_007036519.1|5e-42Transcription factor, putative [Theobroma cacao] gb|EOY21020.1| Transcription fa940013673 (12)ref|XP_009603861.1|6e-52PREDICTED: zinc finger protein CONSTANS-LIKE 16-like [Nicotiana tomentosiformis

Contig 846 BLAST Hits against nr-aa DB Show

Contig 13673 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000846============================================ 752         ============================================Contig013673============================================ 965
   4 --------------------------------------------------------------------------->JMFF015L19                                                               <---------------------------------------------------------------rJMFF015L19  
  29 -------------------------------------------------------------------------------------------->JMSF052D13          <------------------------------------------------------------------------------------------------rJMSF052D13  
  30 ----------------------------------->JMSF014E09                                                                                         <--------------------------------------------------------------------------rJMSF014E09  
  31 ------------------------------------------------------------------------------------>JMSF033N13                                                         <---------------------------------------------------------rJMSF033N13  
  31 --------------------------------------------------------------------------------------------------->JMSF042C10                  <---------------------------------------------------------------------------------rJMSF042C10  
  32 ------------------------------------------->JMSF003I08                                                                          <---------------------------------------------------------------------------------rJMSF003I08  
  34  -------------------------------------------------------------->JMSF012A02                                                                    <-------------------------------------------------------------------rJMSF012A02  
  87 ------------------------------------->JMSF001H24                                                                               <----------------------------------------------------------------------------rJMSF001H24  
  87 ------------------------------------------------------------------------------------>JMSF027O04                                      <----------------------------------------------------------------------rJMSF027O04  
  87 ------------------------------------------------------------------------------------------>JMSF033E24                         <-----------------------------------------------------------------------------rJMSF033E24  
  88 ------------------------------------------------------------------------------------>JMSF022F24                                <----------------------------------------------------------------------------rJMSF022F24  
 258 ---------------------------------------------------------------------------------->JMSF028P14                    <-------------------------------------------------------------------------rJMSF028P14  
      ------------------------------------------>JMSF019B06*                                                          
     ------------------------------------------------------------------------------------>JMSF035K10-