List of clones in pair P000057.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001H03Sequence651012080 (15)610011156 (15)ref|XP_011022059.1|7e-15PREDICTED: nucleolin 1-like isoform X1 [Populus euphratica]
JMFF002D21Sequence673012080 (15)826011156 (15)ref|XP_004231484.1|1e-42PREDICTED: nucleolin 1 isoform X1 [Solanum lycopersicum]
JMFF009C07Sequence686012080 (15)724011156 (15)ref|XP_010315558.1|2e-31PREDICTED: nucleolin 1 isoform X2 [Solanum lycopersicum]
JMFF017K23Sequence649012080 (15)378011156 (15)
JMFF019N23Sequence685012080 (15)771011156 (15)ref|XP_010315558.1|1e-31PREDICTED: nucleolin 1 isoform X2 [Solanum lycopersicum]
JMFF030E21Sequence681011156 (15)ref|XP_010315558.1|6e-21PREDICTED: nucleolin 1 isoform X2 [Solanum lycopersicum]
JMFF032P10Sequence685012080 (15)717011156 (15)ref|XP_004231484.1|8e-28PREDICTED: nucleolin 1 isoform X1 [Solanum lycopersicum]
JMFF042K20Sequence631012080 (15)620011156 (15)gb|ABK94939.1|3e-08unknown [Populus trichocarpa]
JMFF044J08Sequence642012080 (15)631011156 (15)ref|XP_011022059.1|3e-12PREDICTED: nucleolin 1-like isoform X1 [Populus euphratica]
JMFF047P08Sequence640012080 (15)572011156 (15)ref|XP_004231484.1|6e-13PREDICTED: nucleolin 1 isoform X1 [Solanum lycopersicum]
JMFS053B02Sequence598012080 (15)
JMFS060H01Sequence627012080 (15)
JMSF002B24Sequence264012080 (15)ref|XP_011070437.1|2e-04PREDICTED: nucleolin 1-like [Sesamum indicum]771011156 (15)ref|XP_004231484.1|1e-53PREDICTED: nucleolin 1 isoform X1 [Solanum lycopersicum]
JMSF016G15Sequence452012080 (15)763011156 (15)ref|XP_010315558.1|2e-49PREDICTED: nucleolin 1 isoform X2 [Solanum lycopersicum]
JMSF020I02Sequence736012080 (15)738011156 (15)ref|XP_010315558.1|3e-15PREDICTED: nucleolin 1 isoform X2 [Solanum lycopersicum]
JMSF033G08Sequence739012080 (15)791011156 (15)ref|XP_004231484.1|1e-42PREDICTED: nucleolin 1 isoform X1 [Solanum lycopersicum]

Contig 12080 BLAST Hits against nr-aa DB Show

Contig 11156 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig012080============================================ 741         ============================================Contig011156============================================1216
   5  ------------------------------------------------------------------------------------>JMFF042K20                                                                  <--------------------------------------------------rJMFF042K20  
  27  --------------------------------------------------------------------------------------->JMFF017K23                                                                                 <------------------------------rJMFF017K23  
  27  -------------------------------------------------------------------------------------------->JMFF032P10                                                <----------------------------------------------------------rJMFF032P10  
  47 -------------------------------------------------------------------------------------------->JMFF019N23                                             <------------------------------------------------------------rJMFF019N23  
  48  -------------------------------------------------------------------------------------->JMFF044J08                                                             <-------------------------------------------------rJMFF044J08  
  54 -------------------------------------------------------------------------------------------->JMSF020I02                                             <------------------------------------------------------------rJMSF020I02  
  63  ----------------------------------------------------------------------------------------->JMFF009C07                                                 <---------------------------------------------------------rJMFF009C07  
  74   ------------------------------------------------------------------------------------------>JMFF002D21                                     <-------------------------------------------------------------------rJMFF002D21  
  84  --------------------------------------------------------------------------------------->JMFF001H03                                                          <------------------------------------------------rJMFF001H03  
  90 --------------------------------------------------------------------------------------------------->JMSF033G08                               <----------------------------------------------------------------rJMSF033G08  
  98 -------------------------------------------------------------------------------------->JMFF047P08                                                             <----------------------------------------------rJMFF047P08  
 152  ------------------------------------------------------------>JMSF016G15                                                                    <------------------------------------------------------------rJMSF016G15  
 178 ----------------------------------->JMSF002B24                                                                                              <----------------------------------------------------------rJMSF002B24  
             ------------------------------------------------------------------------------>JMFS053B02-               
        ------------------------------------------------------------------------------------>JMFS060H01-              
                                                                                                                                                                <-------------------------------------------------------rJMFF030E21- 
                                                                                                                      <---------------------------------------------rJMSF015C24#