List of clones in pair P000056.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001I05Sequence547006715 (15)ref|XP_009762874.1|7e-49PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]794012338 (13)ref|XP_009791823.1|4e-102PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]
JMFF003E17Sequence486006715 (15)ref|XP_009762874.1|7e-37PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]689012338 (13)ref|XP_009791823.1|2e-74PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]
JMFF009F02Sequence556006715 (15)ref|XP_009762874.1|6e-53PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]676012338 (13)ref|XP_009791823.1|2e-74PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]
JMFF012M14Sequence513006715 (15)ref|XP_009620452.1|4e-80PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]786012338 (13)ref|XP_009598217.1|2e-85PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]
JMFF023J03Sequence491006715 (15)ref|XP_009762874.1|1e-42PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]800012338 (13)ref|XP_009791823.1|2e-103PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]
JMFF030J16Sequence586006715 (15)ref|XP_009620452.1|2e-61PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]696012338 (13)ref|XP_009598217.1|1e-77PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]
JMFF030N08Sequence512006715 (15)ref|XP_009762874.1|2e-46PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]761012338 (13)emb|CDP01289.1|2e-06unnamed protein product [Coffea canephora]
JMFF042C17Sequence620006715 (15)ref|XP_009620452.1|3e-68PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]618012338 (13)ref|XP_009791823.1|2e-55PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]
JMFF043M15Sequence640006715 (15)ref|XP_009620452.1|6e-65PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]
JMFF044C08Sequence639006715 (15)ref|XP_009620452.1|3e-67PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]652012338 (13)ref|XP_009598217.1|1e-50PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]
JMFF046P09Sequence570006715 (15)ref|XP_009762874.1|9e-52PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]
JMFF047A05Sequence472006715 (15)ref|XP_009762874.1|1e-38PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]416012338 (13)ref|XP_009598217.1|5e-12PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]
JMFF049L07Sequence646006715 (15)ref|XP_009620452.1|2e-67PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]650012338 (13)ref|XP_009598217.1|5e-46PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]
JMSF013E21Sequence208006715 (15)769012338 (13)ref|XP_009598217.1|8e-102PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]
JMSF046O03Sequence749006715 (15)ref|XP_009620452.1|5e-88PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]679012338 (13)ref|XP_009598217.1|4e-79PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]

Contig 6715 BLAST Hits against nr-aa DB Show

Contig 12338 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig006715============================================ 749         ============================================Contig012338============================================1250
  25    ------------------------------------------------------------------->JMFF030N08                                                                       <------------------------------------------------------------rJMFF030N08  
 379  ------------------------------------------------------------------------------------->JMFF049L07                                    <-------------------------------------------------rJMFF049L07  
 416  ------------------------------------------------------------------------------------>JMFF044C08                                   <------------------------------------------------rJMFF044C08  
 443  ---------------------------------------------------------------->JMFF003E17                                               <------------------------------------------------------rJMFF003E17  
 455  ------------------------------------------------------------------------>JMFF001I05                              <--------------------------------------------------------------rJMFF001I05  
 458     -------------------------------------------------------------->JMFF047A05                                                                     <--------------------------------rJMFF047A05  
 460      ---------------------------------------------------------------------------------->JMFF042C17                                <------------------------------------------------rJMFF042C17  
 473 --------------------------------------------------------------------------------------------------->JMSF046O03           <-----------------------------------------------------rJMSF046O03  
 477    ------------------------------------------------------------------------->JMFF009F02                                    <-----------------------------------------------------rJMFF009F02  
 480     ----------------------------------------------------------------->JMFF023J03                                 <---------------------------------------------------------------rJMFF023J03  
 484      ----------------------------------------------------------------------------->JMFF030J16                            <-------------------------------------------------------rJMFF030J16  
 506      --------------------------->JMSF013E21                                                                       <------------------------------------------------------------rJMSF013E21  
 681                                ------------------------------------------------------------------->JMFF012M14     <--------------------------------------------------------------rJMFF012M14  
      ------------------------------------------------------------------------------------>JMFF043M15-                
      --------------------------------------------------------------------------->JMFF046P09-