List of clones in pair P000047.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003N23Sequence497006092 (14)ref|XP_010242273.1|3e-73PREDICTED: eukaryotic initiation factor 4A-11 [Nelumbo nucifera]664011205 (25)gb|AAD20980.1|7e-83translation initiation factor 4A2 [Zea mays]
JMFF010P07Sequence554006092 (14)ref|XP_010242273.1|3e-87PREDICTED: eukaryotic initiation factor 4A-11 [Nelumbo nucifera]715011205 (25)gb|AAD20980.1|3e-80translation initiation factor 4A2 [Zea mays]
JMFF011P15Sequence577006092 (14)ref|XP_010242273.1|2e-93PREDICTED: eukaryotic initiation factor 4A-11 [Nelumbo nucifera]610011205 (25)gb|AAD20980.1|4e-75translation initiation factor 4A2 [Zea mays]
JMFF016K05Sequence599011205 (25)gb|AAL69381.1|AF462218_18e-100putative DEAD/DEAH box helicase [Narcissus pseudonarcissus]
JMFF018F17Sequence554006092 (14)ref|XP_010242273.1|3e-87PREDICTED: eukaryotic initiation factor 4A-11 [Nelumbo nucifera]769011205 (25)gb|AAD20980.1|4e-117translation initiation factor 4A2 [Zea mays]
JMFF019H10Sequence575006092 (14)ref|XP_010242273.1|2e-93PREDICTED: eukaryotic initiation factor 4A-11 [Nelumbo nucifera]762011205 (25)gb|AAD20980.1|6e-135translation initiation factor 4A2 [Zea mays]
JMFF022C13Sequence511006092 (14)ref|XP_010242273.1|5e-76PREDICTED: eukaryotic initiation factor 4A-11 [Nelumbo nucifera]610011205 (25)gb|AAD20980.1|1e-81translation initiation factor 4A2 [Zea mays]
JMFF034E06Sequence366006092 (14)gb|ACU18673.1|1e-40unknown [Glycine max]683011205 (25)gb|AAD20980.1|8e-101translation initiation factor 4A2 [Zea mays]
JMFF035N18Sequence541006092 (14)ref|XP_010242273.1|2e-83PREDICTED: eukaryotic initiation factor 4A-11 [Nelumbo nucifera]747011205 (25)gb|AAD20980.1|2e-108translation initiation factor 4A2 [Zea mays]
JMFF040A06Sequence555006092 (14)ref|XP_010242273.1|3e-87PREDICTED: eukaryotic initiation factor 4A-11 [Nelumbo nucifera]759011205 (25)gb|AAD20980.1|4e-92translation initiation factor 4A2 [Zea mays]
JMFF040O01Sequence555006092 (14)ref|XP_010242273.1|3e-87PREDICTED: eukaryotic initiation factor 4A-11 [Nelumbo nucifera]724011205 (25)gb|AAD20980.1|5e-94translation initiation factor 4A2 [Zea mays]
JMFF048A23Sequence614006092 (14)ref|XP_010242273.1|3e-102PREDICTED: eukaryotic initiation factor 4A-11 [Nelumbo nucifera]590011205 (25)emb|CDY37498.1|7e-38BnaC01g37340D [Brassica napus]
JMFF048B21Sequence352006092 (14)gb|ACU18673.1|1e-30unknown [Glycine max]259011205 (25)
JMFN041J21Sequence647011205 (25)ref|XP_009602748.1|9e-153PREDICTED: eukaryotic initiation factor 4A-11 [Nicotiana tomentosiformis] ref|XP
JMFS038G03Sequence618011205 (25)ref|XP_008798133.1|8e-109PREDICTED: eukaryotic initiation factor 4A-14 [Phoenix dactylifera] ref|XP_00879
JMSF022N05Sequence690006092 (14)ref|XP_009602748.1|2e-122PREDICTED: eukaryotic initiation factor 4A-11 [Nicotiana tomentosiformis] ref|XP754011205 (25)gb|AAD20980.1|3e-111translation initiation factor 4A2 [Zea mays]
JMSF026H19Sequence657006092 (14)ref|XP_009602748.1|4e-106PREDICTED: eukaryotic initiation factor 4A-11 [Nicotiana tomentosiformis] ref|XP732011205 (25)gb|AAD20980.1|1e-120translation initiation factor 4A2 [Zea mays]

Contig 6092 BLAST Hits against nr-aa DB Show

Contig 11205 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig006092============================================ 691         ============================================Contig011205============================================1756
   2 -------------------------------------------------------------------------------------->JMFF048A23                                                                                  <---------------------------------rJMFF048A23  
  61 ------------------------------------------------------------------------------->JMFF010P07                                                                                <---------------------------------------rJMFF010P07  
  61 ------------------------------------------------------------------------------->JMFF040A06                                                                             <------------------------------------------rJMFF040A06  
  81 -------------------------------------------------->JMFF048B21                                                                                                                                      <-------------rJMFF048B21  
  96 ------------------------------------------------------------------------------->JMFF040O01                                                                             <----------------------------------------rJMFF040O01  
 105 ----------------------------------------------------------------------->JMFF003N23                                                                                       <-------------------------------------rJMFF003N23  
 127 --------------------------------------------------------------------------------------------------->JMSF022N05                                                     <------------------------------------------rJMSF022N05  
 131 ------------------------------------------------------------------------------->JMFF018F17                                                                        <-------------------------------------------rJMFF018F17  
 133 ----------------------------------------------------------------------------------->JMFF011P15                                                                             <----------------------------------rJMFF011P15  
 154 ---------------------------------------------------->JMFF034E06                                                                                                      <--------------------------------------rJMFF034E06  
 154 ------------------------------------------------------------------------->JMFF022C13                                                                                     <----------------------------------rJMFF022C13  
 154 ----------------------------------------------------------------------------->JMFF035N18                                                                           <----------------------------------------rJMFF035N18  
 211 ---------------------------------------------------------------------------------->JMFF019H10                                                                 <------------------------------------------rJMFF019H10  
 305                   ------------------------------------------------------------------------>JMSF026H19                                                            <-----------------------------------------rJMSF026H19  

                                                                                                                      --------------------------------->JMFF050L24*  
                                                                                                                                            ------------------------------------>JMFN041J21-  
                                                                                                                            ------------------->JMFF022C07*  
                                                                                                                      ---------------------------------->JMFF044L24#  
                                                                                                                       -------------------------------->JMFF016K05-  
                                                                                                                       -------------------------------->JMFF044E24*  
                                                                                                                      --------------------------------->JMFF037K15*  
                                                                                                                       ---------------------------------->JMFS038G03-  
                                                                                                                       ------------------------------>JMFF025G08*  
                                                                                                                       ----------------------------->JMFF006J05*  
                                                                                                                      ---------------------------------->JMFF043F20*