List of clones in pair P000046.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001I22Sequence542003147 (16)ref|XP_004236964.1|4e-71PREDICTED: ATP synthase subunit beta, mitochondrial [Solanum lycopersicum]685001064 (16)emb|CAH59403.1|9e-63mitochondrial F0 ATP synthase beta chain [Plantago major]
JMFF006N24Sequence581003147 (16)ref|XP_004236964.1|4e-79PREDICTED: ATP synthase subunit beta, mitochondrial [Solanum lycopersicum]302001064 (16)
JMFF010G16Sequence547003147 (16)ref|XP_004236964.1|2e-72PREDICTED: ATP synthase subunit beta, mitochondrial [Solanum lycopersicum]691001064 (16)emb|CAH59403.1|3e-89mitochondrial F0 ATP synthase beta chain [Plantago major]
JMFF011M24Sequence581003147 (16)ref|XP_004236964.1|4e-79PREDICTED: ATP synthase subunit beta, mitochondrial [Solanum lycopersicum]
JMFF012C01Sequence451003147 (16)ref|XP_004236964.1|7e-50PREDICTED: ATP synthase subunit beta, mitochondrial [Solanum lycopersicum]764001064 (16)emb|CAH59403.1|5e-88mitochondrial F0 ATP synthase beta chain [Plantago major]
JMFF019M20Sequence539003147 (16)ref|XP_004236964.1|4e-70PREDICTED: ATP synthase subunit beta, mitochondrial [Solanum lycopersicum]758001064 (16)ref|XP_010066667.1|6e-66PREDICTED: ATP synthase subunit beta, mitochondrial-like [Eucalyptus grandis] g
JMFF021A01Sequence477003147 (16)ref|XP_004236964.1|8e-56PREDICTED: ATP synthase subunit beta, mitochondrial [Solanum lycopersicum]687001064 (16)emb|CAH59403.1|5e-69mitochondrial F0 ATP synthase beta chain [Plantago major]
JMFF028G22Sequence536003147 (16)ref|XP_004236964.1|1e-69PREDICTED: ATP synthase subunit beta, mitochondrial [Solanum lycopersicum]694001064 (16)emb|CAH59403.1|4e-88mitochondrial F0 ATP synthase beta chain [Plantago major]
JMFF030E08Sequence340003147 (16)ref|XP_004236964.1|4e-15PREDICTED: ATP synthase subunit beta, mitochondrial [Solanum lycopersicum]733001064 (16)emb|CAH59403.1|6e-84mitochondrial F0 ATP synthase beta chain [Plantago major]
JMFF031H01Sequence451003147 (16)ref|XP_004236964.1|6e-49PREDICTED: ATP synthase subunit beta, mitochondrial [Solanum lycopersicum]697001064 (16)emb|CAH59403.1|3e-89mitochondrial F0 ATP synthase beta chain [Plantago major]
JMFF039A11Sequence544003147 (16)ref|XP_004236964.1|1e-71PREDICTED: ATP synthase subunit beta, mitochondrial [Solanum lycopersicum]739001064 (16)emb|CAH59403.1|3e-83mitochondrial F0 ATP synthase beta chain [Plantago major]
JMFF046I08Sequence533003147 (16)ref|XP_004236964.1|8e-69PREDICTED: ATP synthase subunit beta, mitochondrial [Solanum lycopersicum]549001064 (16)emb|CAH59403.1|5e-45mitochondrial F0 ATP synthase beta chain [Plantago major]
JMFF050E02Sequence571003147 (16)ref|XP_004236964.1|6e-77PREDICTED: ATP synthase subunit beta, mitochondrial [Solanum lycopersicum]188001064 (16)
JMFF051N11Sequence581003147 (16)ref|XP_004236964.1|4e-79PREDICTED: ATP synthase subunit beta, mitochondrial [Solanum lycopersicum]
JMFN014J07Sequence626001064 (16)ref|XP_006654753.1|7e-145PREDICTED: ATP synthase subunit beta, mitochondrial-like [Oryza brachyantha]
JMSF005F13Sequence393003147 (16)ref|XP_004236964.1|3e-35PREDICTED: ATP synthase subunit beta, mitochondrial [Solanum lycopersicum]522001064 (16)emb|CAH59403.1|9e-34mitochondrial F0 ATP synthase beta chain [Plantago major]
JMSF022F03Sequence632003147 (16)ref|XP_004236964.1|2e-89PREDICTED: ATP synthase subunit beta, mitochondrial [Solanum lycopersicum]706001064 (16)emb|CAH59403.1|8e-83mitochondrial F0 ATP synthase beta chain [Plantago major]

Contig 3147 BLAST Hits against nr-aa DB Show

Contig 1064 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig003147============================================ 634         ============================================Contig001064============================================1333
   3 ------------------------------------------------------------------------------------>JMFF019M20                                                             <--------------------------------------------------------rJMFF019M20  
   5 -------------------------------------------------------------------------->JMFF021A01                                                                            <---------------------------------------------------rJMFF021A01  
   5 ------------------------------------------------------------------------------------->JMFF039A11                                                             <-------------------------------------------------------rJMFF039A11  
   6  ---------------------------------------------------------------------->JMFF012C01                                                                         <---------------------------------------------------------rJMFF012C01  
   9 ------------------------------------------------------------------------------------->JMFF001I22                                                                 <---------------------------------------------------rJMFF001I22  
  12 ----------------------------------------------------->JMFF030E08                                                                                             <------------------------------------------------------rJMFF030E08  
  34  ------------------------------------------------------------->JMSF005F13                                                                                                   <--------------------------------------rJMSF005F13  
  53 ----------------------------------------------------------------------------------------->JMFF050E02                                                                                               <-------------rJMFF050E02  
  61 ----------------------------------------------------------------------------------->JMFF046I08                                                                          <----------------------------------------rJMFF046I08  
  63 ------------------------------------------------------------------------------------------->JMFF006N24                                                                                   <----------------------rJMFF006N24  
  72 ---------------------------------------------------------------------->JMFF031H01                                                                          <----------------------------------------------------rJMFF031H01  
  73 ------------------------------------------------------------------------------------>JMFF028G22                                                             <---------------------------------------------------rJMFF028G22  
  77 ------------------------------------------------------------------------------------->JMFF010G16                                                           <---------------------------------------------------rJMFF010G16  
  96 --------------------------------------------------------------------------------------------------->JMSF022F03                                           <----------------------------------------------------rJMSF022F03  
     ------------------------------------------------------------------------------------------->JMFF051N11-          
     ------------------------------------------------------------------------------------------->JMFF011M24-          
                                                                                                                      ---------------------------------------------->JMFN014J07-  
                                                                                                                                                                <-------------------------------------------------------rJMSF047C05*