List of clones in pair P000034.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002O03Sequence480002477 (26)ref|XP_008221422.1|6e-13PREDICTED: DELLA protein GAIP-B [Prunus mume]722009803 (22)ref|XP_009789076.1|6e-98PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMFF007O08Sequence463002477 (26)gb|AFA35960.1|4e-05ELLA domain GRAS family transcription factor [Nicotiana attenuata]722009803 (22)ref|XP_009789076.1|6e-98PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMFF013J02Sequence537002477 (26)ref|XP_008221422.1|4e-15PREDICTED: DELLA protein GAIP-B [Prunus mume]692009803 (22)ref|XP_009789076.1|4e-91PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMFF024H24Sequence746009803 (22)ref|XP_009789076.1|2e-103PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMFF036N08Sequence466002477 (26)ref|XP_008221422.1|7e-14PREDICTED: DELLA protein GAIP-B [Prunus mume]650009803 (22)ref|XP_009789076.1|4e-87PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMFF038L12Sequence442002477 (26)740009803 (22)ref|XP_009789076.1|3e-104PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMFF045G18Sequence638002477 (26)ref|XP_009603475.1|2e-24PREDICTED: DELLA protein GAI1-like [Nicotiana tomentosiformis]626009803 (22)ref|XP_009789076.1|1e-56PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMFF050L17Sequence621002477 (26)ref|XP_009789076.1|6e-23PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]589009803 (22)ref|XP_009789076.1|6e-57PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMFN013G08Sequence609009803 (22)ref|XP_009789076.1|8e-71PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMFN037E16Sequence228009803 (22)emb|CDP00805.1|3e-41unnamed protein product [Coffea canephora]
JMFS056A07Sequence627002477 (26)ref|XP_009603475.1|2e-31PREDICTED: DELLA protein GAI1-like [Nicotiana tomentosiformis]
JMFS058E06Sequence627009803 (22)ref|XP_009789076.1|5e-101PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMFS068D02Sequence606002477 (26)ref|XP_009603475.1|3e-43PREDICTED: DELLA protein GAI1-like [Nicotiana tomentosiformis]
JMFS075E08Sequence617002477 (26)ref|XP_009603475.1|2e-31PREDICTED: DELLA protein GAI1-like [Nicotiana tomentosiformis]
JMFS109B02Sequence610002477 (26)ref|XP_009789076.1|3e-31PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMSF003F19Sequence391002477 (26)732009803 (22)ref|XP_009789076.1|2e-104PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMSF003F20Sequence345002477 (26)733009803 (22)ref|XP_009789076.1|2e-104PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMSF014G22Sequence350002477 (26)742009803 (22)ref|XP_009789076.1|4e-108PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMSF014P05Sequence468002477 (26)gb|AEB36192.1|3e-08RGA-like 1, partial [Helianthus tuberosus]751009803 (22)ref|XP_009789076.1|2e-96PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMSF014P15Sequence440002477 (26)766009803 (22)ref|XP_009789076.1|3e-105PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMSF023C14Sequence608002477 (26)ref|XP_008221422.1|2e-29PREDICTED: DELLA protein GAIP-B [Prunus mume]756009803 (22)ref|XP_009789076.1|7e-105PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMSF024O22Sequence596002477 (26)ref|XP_008221422.1|1e-28PREDICTED: DELLA protein GAIP-B [Prunus mume]736009803 (22)ref|XP_009789076.1|1e-108PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMSF030K18Sequence354002477 (26)665009803 (22)ref|XP_009789076.1|7e-97PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMSF049G08Sequence697002477 (26)ref|XP_009603475.1|6e-45PREDICTED: DELLA protein GAI1-like [Nicotiana tomentosiformis]759009803 (22)ref|XP_009789076.1|9e-96PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]
JMSF051C10Sequence672002477 (26)ref|XP_009603475.1|1e-30PREDICTED: DELLA protein GAI1-like [Nicotiana tomentosiformis]735009803 (22)ref|XP_009789076.1|2e-110PREDICTED: DELLA protein GAI1-like [Nicotiana sylvestris]

Contig 2477 BLAST Hits against nr-aa DB Show

Contig 9803 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig002477============================================ 889         ============================================Contig009803============================================ 857
  53  --------------------------------------------------------------------->JMFF050L17                                                           <-------------------------------------------------------------------rJMFF050L17  
  61        ----------------------------------------------------------------------->JMFF045G18                                                   <------------------------------------------------------------------------rJMFF045G18  
  65   --------------------------------------------------->JMSF014P05                                                         <--------------------------------------------------------------------------------------rJMSF014P05  
  69 ------------------------------------------------>JMSF014P15                                                         <----------------------------------------------------------------------------------------rJMSF014P15  
  74 ------------------------------------------------------------------->JMSF023C14                                      <---------------------------------------------------------------------------------------rJMSF023C14  
  90 ------------------------------------------------->JMFF038L12                                                         <-------------------------------------------------------------------------------------rJMFF038L12  
  90 --------------------------------------------------->JMFF007O08                                                          <----------------------------------------------------------------------------------rJMFF007O08  
 105 -------------------------------------->JMSF014G22                                                                  <-------------------------------------------------------------------------------------rJMSF014G22  
 107 ----------------------------------------------------------->JMFF013J02                                                    <------------------------------------------------------------------------------rJMFF013J02  
 117 ------------------------------------------------------------------>JMSF024O22                                      <------------------------------------------------------------------------------------rJMSF024O22  
 123 --------------------------------------------------------------------------->JMSF051C10                           <-------------------------------------------------------------------------------------rJMSF051C10  
 135    -------------------------------------->JMSF003F20                                                              <-------------------------------------------------------------------------------------rJMSF003F20  
 148        ----------------------------------------------------->JMFF002O03                                                 <----------------------------------------------------------------------------------rJMFF002O03  
 148   -------------------------------------->JMSF030K18                                                                     <-----------------------------------------------------------------------------rJMSF030K18  
 156      ------------------------------------------->JMSF003F19                                                       <-------------------------------------------------------------------------------------rJMSF003F19  
 187        -------------------------------------------------->JMFF036N08                                                       <---------------------------------------------------------------------------rJMFF036N08  
 240                       ----------------------------------------------------------------------------->JMSF049G08           <--------------------------------------------------------------------------------------rJMSF049G08  
      ------------------------------------->JMSF005M03*                                                               
       ---------------------------------------------------------------------->JMFS056A07-                             
     --------------------------->JMSF010I22*                                                                          
        -------------------------------------------------------------------->JMFS075E08-                              
     ---------------------------------------------------->JMSF019K02*                                                 
       -------------------------------------->JMSF006D23#                                                             
       -------------------------------------------------------------------->JMFS109B02-                               
        -------------------------------------->JMSF006N13*                                                            
                    ------------------------------------------------------------------->JMFS068D02-                   
                                                                                                                                                     -------------------------->JMFN037E16-  
                                                                                                                                                                            <----------------------------rJMSF006B21* 
                                                                                                                                           ---------------------------------------------------------------------->JMFN013G08-  
                                                                                                                          <-------------------------------------------------------------------------------------rJMFF024H24- 
                                                                                                                           ------------------------------------------------------------------------>JMFS058E06-