List of clones in pair P000027.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001P21Sequence555013470 (25)gb|ACG70967.1|3e-126translation elongation factor 1, partial [Ziziphus jujuba]656012481 (35)dbj|BAO57272.1|2e-62elongation factor 1-alpha [Ipomoea nil]
JMFF004G06Sequence620013470 (25)ref|XP_003618775.1|1e-94Elongation factor 1-alpha [Medicago truncatula]720012481 (35)dbj|BAO57272.1|3e-119elongation factor 1-alpha [Ipomoea nil]
JMFF004N08Sequence515013470 (25)gb|AGH32904.1|6e-98translation elongation factor 1-alpha, partial [Camellia oleifera]
JMFF007H13Sequence484013470 (25)gb|AGH32904.1|6e-87translation elongation factor 1-alpha, partial [Camellia oleifera]690012481 (35)dbj|BAO57272.1|4e-120elongation factor 1-alpha [Ipomoea nil]
JMFF007O02Sequence586013470 (25)gb|ACG70967.1|3e-116translation elongation factor 1, partial [Ziziphus jujuba]775012481 (35)dbj|BAO57272.1|1e-122elongation factor 1-alpha [Ipomoea nil]
JMFF008B09Sequence575013470 (25)gb|ACG70967.1|4e-113translation elongation factor 1, partial [Ziziphus jujuba]199012481 (35)
JMFF008O20Sequence524013470 (25)gb|AGH32904.1|9e-97translation elongation factor 1-alpha, partial [Camellia oleifera]725012481 (35)dbj|BAO57272.1|1e-65elongation factor 1-alpha [Ipomoea nil]
JMFF013P19Sequence562013470 (25)gb|ACG70967.1|3e-107translation elongation factor 1, partial [Ziziphus jujuba]640012481 (35)gb|ACF81592.1|4e-109unknown [Zea mays]
JMFF015E13Sequence602013470 (25)gb|ACG70967.1|2e-119translation elongation factor 1, partial [Ziziphus jujuba]634012481 (35)ref|XP_009773066.1|2e-69PREDICTED: elongation factor 1-alpha, partial [Nicotiana sylvestris]
JMFF018A13Sequence481013470 (25)gb|AGH32904.1|2e-85translation elongation factor 1-alpha, partial [Camellia oleifera]664012481 (35)gb|ACF81592.1|1e-110unknown [Zea mays]
JMFF023K11Sequence446013470 (25)gb|AGH32904.1|1e-79translation elongation factor 1-alpha, partial [Camellia oleifera]662012481 (35)gb|ACF81592.1|9e-107unknown [Zea mays]
JMFF025C06Sequence522013470 (25)gb|AGH32904.1|6e-98translation elongation factor 1-alpha, partial [Camellia oleifera]768012481 (35)gb|ACF81592.1|7e-108unknown [Zea mays]
JMFF034B15Sequence518013470 (25)gb|AGH32904.1|6e-98translation elongation factor 1-alpha, partial [Camellia oleifera]640012481 (35)gb|AAR83865.1|9e-98elongation factor 1-alpha [Capsicum annuum]
JMFF036F19Sequence618013470 (25)gb|ACG70967.1|1e-123translation elongation factor 1, partial [Ziziphus jujuba]704012481 (35)gb|AAR83865.1|4e-98elongation factor 1-alpha [Capsicum annuum]
JMFF038N03Sequence561013470 (25)gb|AGH32904.1|1e-97translation elongation factor 1-alpha, partial [Camellia oleifera]735012481 (35)gb|AAR83865.1|5e-96elongation factor 1-alpha [Capsicum annuum]
JMFF050G15Sequence623013470 (25)gb|ACG70967.1|5e-125translation elongation factor 1, partial [Ziziphus jujuba]572012481 (35)ref|XP_009773066.1|6e-42PREDICTED: elongation factor 1-alpha, partial [Nicotiana sylvestris]
JMFN009G20Sequence679013470 (25)gb|AEG78681.1|2e-142elongation factor 1 alpha [Erythroxylum coca]
JMFN013D19Sequence627012481 (35)gb|ABF94275.1|3e-137Elongation factor 1-alpha, putative, expressed [Oryza sativa Japonica Group]
JMFN013D21Sequence190012481 (35)ref|XP_011031813.1|4e-07PREDICTED: LOW QUALITY PROTEIN: HBS1-like protein [Populus euphratica]
JMFN019B22Sequence282012481 (35)gb|AEK26871.1|2e-48elongation factor 1-alpha, partial [Vincetoxicum mongolicum]
JMFN032E11Sequence584012481 (35)ref|XP_009773066.1|2e-86PREDICTED: elongation factor 1-alpha, partial [Nicotiana sylvestris]
JMFS017C09Sequence642013470 (25)gb|AEG78681.1|1e-137elongation factor 1 alpha [Erythroxylum coca]
JMFS020H08Sequence617013470 (25)gb|AEG78681.1|8e-138elongation factor 1 alpha [Erythroxylum coca]
JMFS046C12Sequence609012481 (35)gb|ABF94275.1|4e-145Elongation factor 1-alpha, putative, expressed [Oryza sativa Japonica Group]
JMFS049G01Sequence622012481 (35)dbj|BAO57272.1|2e-146elongation factor 1-alpha [Ipomoea nil]
JMFS135E08Sequence599012481 (35)gb|ABF94275.1|9e-131Elongation factor 1-alpha, putative, expressed [Oryza sativa Japonica Group]
JMSF005C16Sequence236013470 (25)ref|XP_003591963.1|6e-22Elongation factor 1-alpha, partial [Medicago truncatula]
JMSF013L23Sequence291013470 (25)emb|CBI31496.3|4e-36unnamed protein product [Vitis vinifera]
JMSF021A20Sequence686013470 (25)gb|AEG78681.1|4e-139elongation factor 1 alpha [Erythroxylum coca]782012481 (35)gb|ACF81592.1|1e-108unknown [Zea mays]
JMSF037E05Sequence688013470 (25)gb|ACG70967.1|6e-105translation elongation factor 1, partial [Ziziphus jujuba]749012481 (35)gb|AAR83865.1|1e-101elongation factor 1-alpha [Capsicum annuum]
JMSF049K21Sequence678013470 (25)gb|AEG78681.1|5e-139elongation factor 1 alpha [Erythroxylum coca]707012481 (35)gb|ACF81592.1|4e-109unknown [Zea mays]

Contig 13470 BLAST Hits against nr-aa DB Show

Contig 12481 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig013470============================================ 858         ============================================Contig012481============================================1735
  41 ------------------------------------------------------------------------------->JMSF037E05                                                                              <------------------------------------------rJMSF037E05  
 145                  ------------------------------------------------------------------------>JMFF050G15                                                                                 <-------------------------------rJMFF050G15  
 156                 --------------------------------------------------------------------->JMFF015E13                                                                               <------------------------------------rJMFF015E13  
 163                 ------------------------------------------------------------>JMFF008O20                                                                                  <-----------------------------------------rJMFF008O20  
 171                  ----------------------------------------------------------------->JMFF038N03                                                                           <------------------------------------------rJMFF038N03  
 181                 ------------------------------------------------------------------------------->JMSF021A20                                                            <--------------------------------------------rJMSF021A20  
 184                 ------------------------------------------------------------>JMFF025C06                                                                              <--------------------------------------------rJMFF025C06  
 253                  ------------------------------------------------------------------------------>JMSF049K21                                                            <----------------------------------------rJMSF049K21  
 262                 ----------------------------------------------------------------------->JMFF036F19                                                                   <----------------------------------------rJMFF036F19  
 274                          ---------------------------------------------------------------->JMFF001P21                                                                       <-------------------------------------rJMFF001P21  
 293                 -------------------------------------------------------------------->JMFF007O02                                                                <--------------------------------------------rJMFF007O02  
 297                ------------------------------------------------------->JMFF018A13                                                                                    <-------------------------------------rJMFF018A13  
 300                -------------------------------------------------------->JMFF007H13                                                                                 <---------------------------------------rJMFF007H13  
 302                 ----------------------------------------------------------------------->JMFF004G06                                                                <-----------------------------------------rJMFF004G06  
 307                 --------------------------------------------------->JMFF023K11                                                                                       <-------------------------------------rJMFF023K11  
 313                ----------------------------------------------------------------->JMFF013P19                                                                           <------------------------------------rJMFF013P19  
 318                  ----------------------------------------------------------->JMFF034B15                                                                               <------------------------------------rJMFF034B15  
 319                 ------------------------------------------------------------------>JMFF008B09                                                                                                   <----------rJMFF008B09  
                            ----------------------------------------------------------------------->JMFS020H08-       
                         -------------------------------------------------------------------------->JMFS017C09-       
                      ----------------------------------------------------------->JMFF004N08-                         
                          ------------------------------------------------------------------------------>JMFN009G20-  
                    ------------------------------------------------------------>JMFF049O01#                          
                      -------------------------->JMSF005C16-                                                          
                    --------------------------------->JMSF013L23-                                                     
                                                                                                                      -------------------------------->JMFF030F17*  
                                                                                                                                                                                --------------------------------->JMFN032E11-  
                                                                                                                          --------------------------------->JMFN013D19-  
                                                                                                                       ---------------------------->JMFF027P11*  
                                                                                                                      --------------------------------->JMFF016H10*  
                                                                                                                          ------------------------------->JMFF026C08*  
                                                                                                                             ------>JMFN013D21-  
                                                                                                                      -------------------------------->JMFF035A02*  
                                                                                                                                                                                --------------->JMFN019B22-  
                                                                                                                       ----------------->JMSF009I07*  
                                                                                                                      -------------------------------->JMFF006C24*  
                                                                                                                       --------------------------------->JMFF006A06*  
                                                                                                                                         ---------------------------------->JMFS046C12-  
                                                                                                                          ---------------------------------->JMFF036F08*  
                                                                                                                      -------------------------------->JMFF037G17*  
                                                                                                                          -------------------------------->JMFS135E08-  
                                                                                                                                                   ----------------------------------->JMFS049G01-