List of clones in pair P000020.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP018A02Sequence206002729 (25)
JMCP020D04Sequence249002729 (25)
JMFF002P19Sequence502000634 (24)gb|AGK27782.1|3e-75actin 7, partial [Dendrocalamus latiflorus]758002729 (25)tpg|DAA51050.1|2e-51TPA: putative actin family protein [Zea mays]
JMFF007B15Sequence145000634 (24)729002729 (25)dbj|BAB60900.1|1e-62actin [Ipomoea nil]
JMFF008H01Sequence154000634 (24)711002729 (25)gb|AFP43694.1|9e-111actin 2, partial [Eriobotrya japonica]
JMFF010B09Sequence470000634 (24)gb|AGK27782.1|2e-73actin 7, partial [Dendrocalamus latiflorus]295002729 (25)dbj|BAB60900.1|2e-24actin [Ipomoea nil]
JMFF016E21Sequence507000634 (24)gb|AGK27782.1|2e-81actin 7, partial [Dendrocalamus latiflorus]696002729 (25)gb|AFP43694.1|3e-119actin 2, partial [Eriobotrya japonica]
JMFF017E06Sequence512000634 (24)gb|AGK27782.1|1e-85actin 7, partial [Dendrocalamus latiflorus]738002729 (25)gb|AFP43694.1|5e-119actin 2, partial [Eriobotrya japonica]
JMFF022O22Sequence228000634 (24)gb|AGK27782.1|4e-13actin 7, partial [Dendrocalamus latiflorus]760002729 (25)tpg|DAA51050.1|9e-53TPA: putative actin family protein [Zea mays]
JMFF025N09Sequence116000634 (24)771002729 (25)gb|ADL59374.2|9e-148actin 4 [Ipomoea nil] gb|AFD62801.1| actin 4 [Ipomoea purpurea]
JMFF028O24Sequence435000634 (24)gb|AGK27782.1|6e-66actin 7, partial [Dendrocalamus latiflorus]661002729 (25)gb|AFP43694.1|1e-118actin 2, partial [Eriobotrya japonica]
JMFF029A15Sequence295000634 (24)emb|CDX79746.1|2e-19BnaC03g20820D [Brassica napus]761002729 (25)tpg|DAA51050.1|9e-53TPA: putative actin family protein [Zea mays]
JMFF032O01Sequence467000634 (24)gb|AGK27782.1|2e-73actin 7, partial [Dendrocalamus latiflorus]669002729 (25)gb|AFP43694.1|7e-121actin 2, partial [Eriobotrya japonica]
JMFF033K19Sequence470000634 (24)gb|AGK27782.1|2e-73actin 7, partial [Dendrocalamus latiflorus]264002729 (25)gb|AEL88913.1|5e-18actin [Halodule beaudettei]
JMFF033M18Sequence471000634 (24)gb|AGK27782.1|2e-75actin 7, partial [Dendrocalamus latiflorus]772002729 (25)gb|ADE05541.1|2e-72actin [Liriodendron tulipifera]
JMFF039O05Sequence518000634 (24)gb|AGK27782.1|3e-84actin 7, partial [Dendrocalamus latiflorus]717002729 (25)gb|ADL59374.2|8e-133actin 4 [Ipomoea nil] gb|AFD62801.1| actin 4 [Ipomoea purpurea]
JMFF043J04Sequence636000634 (24)gb|AGK27782.1|4e-117actin 7, partial [Dendrocalamus latiflorus]601002729 (25)gb|ADE05541.1|4e-93actin [Liriodendron tulipifera]
JMFF045D18Sequence644000634 (24)ref|XP_004156708.1|4e-130PREDICTED: actin-97-like [Cucumis sativus]625002729 (25)gb|ADE05541.1|1e-96actin [Liriodendron tulipifera]
JMFF045J16Sequence639000634 (24)gb|AGK27782.1|2e-119actin 7, partial [Dendrocalamus latiflorus]571002729 (25)tpg|DAA51050.1|4e-72TPA: putative actin family protein [Zea mays]
JMFF046E07Sequence636000634 (24)gb|ADL59374.2|2e-121actin 4 [Ipomoea nil] gb|AFD62801.1| actin 4 [Ipomoea purpurea]503002729 (25)gb|AAW83504.1|1e-04actin [Ipomoea batatas]
JMFF049O23Sequence568000634 (24)gb|AGK27782.1|9e-76actin 7, partial [Dendrocalamus latiflorus]422002729 (25)
JMFN031M22Sequence534002729 (25)gb|ADE05541.1|1e-87actin [Liriodendron tulipifera]
JMFS018C01Sequence495000634 (24)dbj|BAC81670.1|2e-67actin [Fragaria x ananassa]
JMFS119A11Sequence627000634 (24)gb|ADL59374.2|2e-129actin 4 [Ipomoea nil] gb|AFD62801.1| actin 4 [Ipomoea purpurea]
JMSF009L18Sequence338000634 (24)gb|AAS78671.1|2e-33actin [Capsicum annuum]743002729 (25)gb|ADL59374.2|2e-149actin 4 [Ipomoea nil] gb|AFD62801.1| actin 4 [Ipomoea purpurea]
JMSF033M14Sequence146002729 (25)
JMSF049I04Sequence674000634 (24)emb|CAJ42300.1|4e-102actin 1 [Plantago major]717002729 (25)gb|ADL59374.2|2e-137actin 4 [Ipomoea nil] gb|AFD62801.1| actin 4 [Ipomoea purpurea]

Contig 634 BLAST Hits against nr-aa DB Show

Contig 2729 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000634============================================ 686         ============================================Contig002729============================================1082
   6  ---------------------------------------------------------------------------------->JMFF049O23                                                                                <--------------------------------------rJMFF049O23  
  19  -------------------------------------------------------------------->JMFF033M18                                                             <----------------------------------------------------------------------rJMFF033M18  
  19  ------------------------------------------------------------------------>JMFF002P19                                                          <---------------------------------------------------------------------rJMFF002P19  
  30   -------------------->JMFF007B15                                                                                                               <-------------------------------------------------------------------rJMFF007B15  
  30   ------------------------------------------>JMFF029A15                                                                                      <----------------------------------------------------------------------rJMFF029A15  
  31   -------------------------------->JMFF022O22                                                                                                 <---------------------------------------------------------------------rJMFF022O22  
  44   -------------------------------------------------------------------------------------------->JMFF046E07                                                            <--------------------------------------------rJMFF046E07  
 230  --------------------->JMFF008H01                                                                                             <-----------------------------------------------------------------rJMFF008H01  
 238   ------------------------------------------------------------------------->JMFF017E06                                      <-------------------------------------------------------------------rJMFF017E06  
 239  -------------------------------------------------------------------------------------------->JMFF045J16                                     <--------------------------------------------------rJMFF045J16  
 262  -------------------------------------------------------------------------------------------->JMFF043J04                             <-------------------------------------------------------rJMFF043J04  
 273  ------------------------------------------------------------------------>JMFF016E21                                        <---------------------------------------------------------------rJMFF016E21  
 285       --------------------------------------------------------------------------------------------->JMFF045D18                      <---------------------------------------------------------rJMFF045D18  
 304  -------------------------------------------------------------------->JMFF033K19                                                                                 <-----------------------rJMFF033K19  
 306  --------------------------------------------------------------->JMFF028O24                                                 <------------------------------------------------------------rJMFF028O24  
 310  ---------------->JMFF025N09                                                                                        <--------------------------------------------------------------------rJMFF025N09  
 313  -------------------------------------------------------------------------->JMFF039O05                                 <-----------------------------------------------------------------rJMFF039O05  
 317  ------------------------------------------------------------------->JMFF010B09                                                                               <--------------------------rJMFF010B09  
 332     ---------------------------------------------------------------->JMFF032O01                                            <-------------------------------------------------------------rJMFF032O01  
 340 ------------------------------------------------>JMSF009L18                                                      <--------------------------------------------------------------------rJMSF009L18  
 351     ---------------------------------------------------------------------------------------------->JMSF049I04          <---------------------------------------------------------------rJMSF049I04  
         ----------------------------------------------------------------------->JMFS018C01-                          
             ------------------------------------------------------------------------------------------->JMFS119A11-  
                             ------------------------------------------------------------>JMFF011B06#                 
                                                                                                                                             ------------------------------------------------>JMFN031M22-  
                                                                                                                                                                                   ------------>JMSF033M14-  
                                                                                                                                                                            ------------------>rJMCP018A02- 
                                                                                                                                                                            ---------------------->rJMCP020D04-