List of clones in pair P000008.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003F08Sequence593000140 (29)gb|ACN40426.1|8e-98unknown [Picea sitchensis]763002535 (32)emb|CAJ38386.1|2e-145alpha tubulin [Plantago major]
JMFF003L01Sequence741002535 (32)ref|XP_004252814.1|4e-140PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF005I04Sequence452000140 (29)ref|NP_001275472.1|3e-76alpha-tubulin-like protein [Solanum tuberosum] gb|ABA46784.1| alpha-tubulin-like732002535 (32)ref|XP_004252814.1|1e-145PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF008B03Sequence552000140 (29)gb|ACN40426.1|8e-102unknown [Picea sitchensis]664002535 (32)ref|XP_004252814.1|1e-134PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF009N06Sequence599000140 (29)gb|ACN40426.1|1e-97unknown [Picea sitchensis]764002535 (32)ref|XP_004252814.1|3e-136PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF012H01Sequence455000140 (29)ref|NP_001275472.1|3e-76alpha-tubulin-like protein [Solanum tuberosum] gb|ABA46784.1| alpha-tubulin-like758002535 (32)ref|XP_004252814.1|2e-136PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF013F14Sequence607000140 (29)gb|ACN40426.1|2e-99unknown [Picea sitchensis]750002535 (32)ref|XP_004252814.1|4e-124PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF013L04Sequence542000140 (29)gb|ACN40426.1|8e-99unknown [Picea sitchensis]284002535 (32)gb|AAU21475.1|1e-31alpha-tubulin, partial [Camellia sinensis]
JMFF014G06Sequence767002535 (32)emb|CAJ38386.1|4e-147alpha tubulin [Plantago major]
JMFF015L17Sequence544000140 (29)gb|ACN40426.1|8e-99unknown [Picea sitchensis]745002535 (32)ref|XP_004252814.1|9e-141PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF016B17Sequence451000140 (29)ref|NP_001275472.1|3e-76alpha-tubulin-like protein [Solanum tuberosum] gb|ABA46784.1| alpha-tubulin-like760002535 (32)ref|XP_004252814.1|8e-146PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF017E07Sequence602000140 (29)gb|ACN40426.1|1e-98unknown [Picea sitchensis]761002535 (32)ref|XP_004252814.1|6e-145PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF018C06Sequence555000140 (29)gb|ACN40426.1|8e-102unknown [Picea sitchensis]761002535 (32)ref|XP_004252814.1|8e-146PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF019I11Sequence606000140 (29)gb|ACN40426.1|2e-99unknown [Picea sitchensis]737002535 (32)emb|CAJ38386.1|1e-146alpha tubulin [Plantago major]
JMFF021B23Sequence553000140 (29)gb|ACN40426.1|8e-102unknown [Picea sitchensis]704002535 (32)emb|CAJ38386.1|6e-147alpha tubulin [Plantago major]
JMFF022A24Sequence450000140 (29)ref|NP_001275472.1|2e-75alpha-tubulin-like protein [Solanum tuberosum] gb|ABA46784.1| alpha-tubulin-like756002535 (32)ref|XP_004252814.1|1e-150PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF023N16Sequence536000140 (29)gb|ACN40426.1|2e-97unknown [Picea sitchensis]734002535 (32)ref|XP_004252814.1|4e-145PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF025D09Sequence541000140 (29)gb|ACN40426.1|5e-98unknown [Picea sitchensis]749002535 (32)ref|XP_004252814.1|1e-136PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF026E19Sequence559000140 (29)gb|ACN40426.1|1e-101unknown [Picea sitchensis]768002535 (32)ref|XP_004252814.1|3e-138PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF028B15Sequence697002535 (32)ref|XP_004252814.1|5e-123PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF032D20Sequence553000140 (29)gb|ACN40426.1|8e-102unknown [Picea sitchensis]676002535 (32)ref|XP_004252814.1|4e-123PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF033B10Sequence553000140 (29)gb|ACN40426.1|1e-100unknown [Picea sitchensis]756002535 (32)ref|XP_004252814.1|2e-143PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF033L11Sequence541000140 (29)gb|ACN40426.1|5e-98unknown [Picea sitchensis]739002535 (32)ref|XP_004252814.1|3e-139PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF035C08Sequence620000140 (29)emb|CAA62917.1|7e-69alfa-tubulin [Oryza sativa Japonica Group]770002535 (32)ref|XP_004252814.1|1e-137PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF037J02Sequence553000140 (29)tpg|DAA51110.1|6e-100TPA: alpha-tubulin, partial [Zea mays] tpg|DAA51116.1| TPA: alpha-tubulin, parti759002535 (32)ref|XP_004252814.1|8e-146PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF041O06Sequence636000140 (29)gb|ACN40426.1|3e-107unknown [Picea sitchensis]608002535 (32)ref|XP_004252814.1|1e-98PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF043K23Sequence637000140 (29)gb|ACN40426.1|8e-101unknown [Picea sitchensis]618002535 (32)gb|EYU34085.1|2e-95hypothetical protein MIMGU_mgv1a0196712mg, partial [Erythranthe guttata]
JMFF044A07Sequence643000140 (29)gb|ACN40426.1|6e-108unknown [Picea sitchensis]618002535 (32)ref|XP_004252814.1|2e-95PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF049I15Sequence344000140 (29)gb|EUB56387.1|8e-39Tubulin alpha-1C chain [Echinococcus granulosus]315002535 (32)gb|AAU21475.1|8e-21alpha-tubulin, partial [Camellia sinensis]
JMFF049J07Sequence643000140 (29)gb|EYU34086.1|2e-93hypothetical protein MIMGU_mgv1a0196711mg, partial [Erythranthe guttata]597002535 (32)ref|XP_004252814.1|1e-98PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFS014G05Sequence625000140 (29)gb|ACN40426.1|4e-108unknown [Picea sitchensis]
JMFS054A04Sequence564002535 (32)gb|EYU34085.1|2e-94hypothetical protein MIMGU_mgv1a0196712mg, partial [Erythranthe guttata]
JMSF035E09Sequence667000140 (29)gb|ACN40426.1|8e-114unknown [Picea sitchensis]715002535 (32)ref|XP_004252814.1|6e-146PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]

Contig 140 BLAST Hits against nr-aa DB Show

Contig 2535 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000140============================================ 668         ============================================Contig002535============================================ 810
   2 ----------------------------------------------------------------------------------->JMFF026E19                        <----------------------------------------------------------------------------------------------rJMFF026E19  
   2 -------------------------------------------------------------------------------------------->JMFF035C08               <----------------------------------------------------------------------------------------------rJMFF035C08  
   4 ----------------------------------------------------------------------------------------->JMFF009N06                  <----------------------------------------------------------------------------------------------rJMFF009N06  
   9 ------------------------------------------------------------------->JMFF012H01                                        <---------------------------------------------------------------------------------------------rJMFF012H01  
  15 -------------------------------------------------------------------------------->JMFF025D09                           <--------------------------------------------------------------------------------------------rJMFF025D09  
  21  ---------------------------------------------------------------------------------------------->JMFF041O06                              <--------------------------------------------------------------------------rJMFF041O06  
  28  ------------------------------------------------------------------------------------------------>JMFF049J07                             <-------------------------------------------------------------------------rJMFF049J07  
  35 -------------------------------------------------------------------------------->JMFF033L11                           <------------------------------------------------------------------------------------------rJMFF033L11  
  39 ---------------------------------------------------------------------------------->JMFF032D20                                <-----------------------------------------------------------------------------------rJMFF032D20  
  43 ---------------------------------------------------------------------------------->JMFF018C06                     <---------------------------------------------------------------------------------------------rJMFF018C06  
  43 ----------------------------------------------------------------------------------------->JMFF017E07              <---------------------------------------------------------------------------------------------rJMFF017E07  
  45 ------------------------------------------------------------------->JMFF022A24                                    <---------------------------------------------------------------------------------------------rJMFF022A24  
  45 -------------------------------------------------------------------------------->JMFF015L17                         <-------------------------------------------------------------------------------------------rJMFF015L17  
  46 ------------------------------------------------------------------->JMFF016B17                                    <---------------------------------------------------------------------------------------------rJMFF016B17  
  46 ---------------------------------------------------------------------------------------->JMFF003F08              <---------------------------------------------------------------------------------------------rJMFF003F08  
  47 ---------------------------------------------------------------------------------->JMFF033B10                     <---------------------------------------------------------------------------------------------rJMFF033B10  
  47 ---------------------------------------------------------------------------------->JMFF037J02                     <---------------------------------------------------------------------------------------------rJMFF037J02  
  50 ------------------------------------------------------------------------------------------>JMFF013F14             <--------------------------------------------------------------------------------------------rJMFF013F14  
  69 ------------------------------------------------------------------->JMFF005I04                                    <------------------------------------------------------------------------------------------rJMFF005I04  
  70 ------------------------------------------------------------------------------------------>JMFF019I11            <------------------------------------------------------------------------------------------rJMFF019I11  
  72 -------------------------------------------------------------------------------->JMFF023N16                      <------------------------------------------------------------------------------------------rJMFF023N16  
  90 --------------------------------------------------------------------------------------------------->JMSF035E09   <----------------------------------------------------------------------------------------rJMSF035E09  
  93  ---------------------------------------------------------------------------------->JMFF008B03                          <---------------------------------------------------------------------------------rJMFF008B03  
 103 ---------------------------------------------------------------------------------->JMFF021B23                     <--------------------------------------------------------------------------------------rJMFF021B23  
 108 -------------------------------------------------------------------------------->JMFF013L04                                                                          <----------------------------------rJMFF013L04  
 125        -------------------------------------------------->JMFF049I15                                                                                                   <-----------------------------------rJMFF049I15  
 154 ----------------------------------------------------------------------------------------------->JMFF043K23                                <-------------------------------------------------------rJMFF043K23  
 154 ----------------------------------------------------------------------------------------------->JMFF044A07                                <-------------------------------------------------------rJMFF044A07  
        -------------------------------------------------------------------------------------------->JMFS014G05-      
                                                                                                                      <----------------------------------------------------------------------------------------------rJMFF014G06- 
                                                                                                                                               <---------------------------------------------------------------------JMFS054A04-  
                                                                                                                                  <-------------------------------------------------------------------------------------rJMFF028B15- 
                                                                                                                          <----------------------------------------------------------------------------------------rJMFF003L01-