List of clones in pair P000006.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004M13Sequence444009527 (34)ref|NP_001234196.1|2e-41FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot720006858 (30)gb|KHN33816.1|1e-144ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMFF005M21Sequence519009527 (34)ref|NP_001234196.1|3e-57FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot754006858 (30)gb|KHN33816.1|1e-151ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMFF007J12Sequence600009527 (34)ref|NP_001234196.1|8e-77FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot811006858 (30)gb|KHN33816.1|2e-157ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMFF010J03Sequence606009527 (34)ref|NP_001234196.1|6e-78FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot770006858 (30)gb|KHN33816.1|7e-150ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMFF012M12Sequence462009527 (34)ref|NP_001234196.1|7e-45FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot766006858 (30)gb|KHN33816.1|3e-157ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMFF013I19Sequence528009527 (34)ref|NP_001234196.1|3e-45FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot582006858 (30)gb|KHN33816.1|1e-103ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMFF014K02Sequence461009527 (34)ref|NP_001234196.1|7e-45FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot732006858 (30)gb|KHN33816.1|3e-138ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMFF019A04Sequence449009527 (34)ref|NP_001234196.1|7e-42FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot747006858 (30)gb|KHN33816.1|2e-149ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMFF020D22Sequence528009527 (34)ref|NP_001234196.1|9e-60FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot504006858 (30)gb|KHN33816.1|1e-87ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMFF020O24Sequence520009527 (34)ref|NP_001234196.1|4e-58FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot772006858 (30)gb|KHN33816.1|2e-156ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMFF023I04Sequence453009527 (34)ref|NP_001234196.1|2e-42FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot798006858 (30)gb|KHN33816.1|3e-145ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMFF024K05Sequence454009527 (34)ref|NP_001234196.1|3e-43FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot692006858 (30)gb|KHN33816.1|9e-138ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMFF028J15Sequence471009527 (34)ref|NP_001234196.1|7e-47FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot
JMFF033E02Sequence456009527 (34)ref|NP_001234196.1|3e-43FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot770006858 (30)gb|KHN33816.1|2e-158ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMFF039P02Sequence460009527 (34)ref|NP_001234196.1|1e-43FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot759006858 (30)gb|KHN33816.1|2e-149ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMFF040C14Sequence456009527 (34)ref|NP_001234196.1|3e-43FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot
JMFF040G15Sequence450009527 (34)ref|NP_001234196.1|7e-42FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot480006858 (30)gb|KHN33816.1|9e-83ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMFF046D14Sequence482009527 (34)ref|NP_001234196.1|3e-48FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot407006858 (30)gb|KHN33816.1|4e-53ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMFF051B01Sequence641009527 (34)ref|NP_001234196.1|7e-86FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot572006858 (30)gb|KHN33816.1|7e-99ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMFS099F06Sequence594009527 (34)ref|NP_001234196.1|2e-60FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot
JMSF002E13Sequence457009527 (34)ref|NP_001234196.1|4e-18FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot765006858 (30)gb|KHN33816.1|4e-157ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMSF008A01Sequence256009527 (34)736006858 (30)gb|KHN33816.1|7e-142ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMSF014O05Sequence452009527 (34)ref|NP_001234196.1|2e-42FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot792006858 (30)gb|KHN33816.1|8e-169ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMSF016I19Sequence397009527 (34)ref|NP_001234196.1|4e-12FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot789006858 (30)gb|KHN33816.1|6e-156ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMSF036L22Sequence680009527 (34)ref|NP_001234196.1|3e-91FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot585006858 (30)gb|KHN33816.1|1e-103ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMSF043J14Sequence697009527 (34)ref|NP_001234196.1|9e-88FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot768006858 (30)gb|KHN33816.1|1e-154ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMSF045B03Sequence608009527 (34)ref|NP_001234196.1|9e-79FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot572006858 (30)gb|KHN33816.1|7e-102ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMSF045C03Sequence698009527 (34)ref|NP_001234196.1|9e-88FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot747006858 (30)gb|KHN33816.1|4e-119ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMSF045K19Sequence774009527 (34)ref|NP_001234196.1|5e-77FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot
JMSF046C03Sequence475006858 (30)gb|KHN33816.1|5e-90ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMSF046I06Sequence699009527 (34)ref|NP_001234196.1|9e-88FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot840006858 (30)gb|KHN33816.1|5e-176ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMSF047C08Sequence701009527 (34)ref|NP_001234196.1|4e-87FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot789006858 (30)gb|KHN33816.1|2e-147ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMSF047L21Sequence667009527 (34)ref|NP_001234196.1|2e-91FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot735006858 (30)gb|KHN33816.1|2e-144ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
JMSF049J16Sequence700009527 (34)ref|NP_001234196.1|2e-89FtsH-like protein precursor [Solanum lycopersicum] gb|AAQ93011.1| FtsH-like prot747006858 (30)gb|KHN33816.1|6e-141ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]

Contig 9527 BLAST Hits against nr-aa DB Show

Contig 6858 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig009527============================================ 870         ============================================Contig006858============================================ 873
  61        ---------------------------->JMSF008A01                                                                                  <------------------------------------------------------------------------------------rJMSF008A01  
  78         -------------------------------------------->JMSF016I19                                                          <------------------------------------------------------------------------------------------rJMSF016I19  
  90        --------------------------------------------------->JMSF002E13                                                    <---------------------------------------------------------------------------------------rJMSF002E13  
 170                    --------------------------------------------------->JMFF023I04                                           <----------------------------------------------------------------------------------------rJMFF023I04  
 171                    ------------------------------------------------------>JMFF046D14                                                                                     <-------------------------------------------rJMFF046D14  
 172                    -------------------------------------------------------------------->JMFF007J12                        <------------------------------------------------------------------------------------------rJMFF007J12  
 174                    ------------------------------------------------------------------------->JMFF051B01                                             <---------------------------------------------------------------rJMFF051B01  
 175                    --------------------------------------------------------------------------->JMSF036L22                                        <------------------------------------------------------------------rJMSF036L22  
 175                    ------------------------------------------------------------------------------->JMSF045C03                   <-----------------------------------------------------------------------------------rJMSF045C03  
 175                    ------------------------------------------------------------------------------->JMSF049J16                 <-------------------------------------------------------------------------------------rJMSF049J16  
 177                     --------------------------------------------------->JMFF014K02                                                 <---------------------------------------------------------------------------------rJMFF014K02  
 177                    ------------------------------------------------------------>JMFF013I19                                                       <------------------------------------------------------------------rJMFF013I19  
 178                     ------------------------------------------------------------------------------->JMSF047C08            <-----------------------------------------------------------------------------------------rJMSF047C08  
 178                    ---------------------------------------------------->JMFF039P02                                           <--------------------------------------------------------------------------------------rJMFF039P02  
 180                    --------------------------------------------------------------------->JMSF045B03                                               <-----------------------------------------------------------------rJMSF045B03  
 182                     ---------------------------------------------------------------------------->JMSF047L21                     <-----------------------------------------------------------------------------------rJMSF047L21  
 195                    ----------------------------------------------------------->JMFF005M21                                  <--------------------------------------------------------------------------------------rJMFF005M21  
 195                    ----------------------------------------------------------->JMFF020O24                                <----------------------------------------------------------------------------------------rJMFF020O24  
 195                    --------------------------------------------------------------------->JMFF010J03                      <----------------------------------------------------------------------------------------rJMFF010J03  
 196                     -------------------------------------------------->JMFF004M13                                              <----------------------------------------------------------------------------------rJMFF004M13  
 196                    --------------------------------------------------->JMFF019A04                                           <-------------------------------------------------------------------------------------rJMFF019A04  
 196                    --------------------------------------------------->JMFF024K05                                                  <------------------------------------------------------------------------------rJMFF024K05  
 199                    ------------------------------------------------------------>JMFF020D22                                                              <---------------------------------------------------------rJMFF020D22  
 201                    --------------------------------------------------->JMFF033E02                                        <---------------------------------------------------------------------------------------rJMFF033E02  
 201                    ---------------------------------------------------->JMFF012M12                                       <---------------------------------------------------------------------------------------rJMFF012M12  
 202                     ------------------------------------------------------------------------------->JMSF046I06   <------------------------------------------------------------------------------------------------rJMSF046I06  
 204                     ------------------------------------------------------------------------------->JMSF043J14            <--------------------------------------------------------------------------------------rJMSF043J14  
 222                     --------------------------------------------------->JMSF014O05                                  <------------------------------------------------------------------------------------------rJMSF014O05  
 272                    --------------------------------------------------->JMFF040G15                                                                 <------------------------------------------------------rJMFF040G15  
     ---------------------------------------------------------------------------------------->JMSF045K19-             
                        ----------------------------------------------------->JMFF028J15-                             
                        --------------------------------------------------->JMFF040C14-                               
                                              -------------------------------->JMFF007H23*                            
                 ------------------------------------------------------------------->JMFS099F06-                      
                                                                                                                                                        <---------------------------------------------------rJMSF046C03-