Alignment Contig 998

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF050G04+ GAAGTCCATTAAGCTCTCTCCTTCTTCTTCTTCTTGTTTCCCTGTCCTCTACTCTTCTTC
JMFF021F10+ ATTAAGCTCTCTCCTTCTTCTTCTTCTTGTTTCCCTGTCCTCTACTCTTCTTC
JMFF010P05+ ATTAAGCTCTCTCCTTCTTCTTCTTCTTGTTTCCCTGTCCTCTACTCTTCTTC
JMSF004K03+ GCTCTCTCCTTCTTCTTCTTCTTGTTTCCCTGTCCTCTACTCTTCTTC
JMFF021N10+ CTCTACTCTTCTTC
JMFF017I02+ ATTAAGCTCTCTCCTTCTTCTTCTTCTTGTTTCCCTGTCCTCTACTCTTCTTC
JMFF048K01+ ATTAGGCTCTCTCCTTCTTCTTCTTCTTGTTTCCCTGTCCTCTACTCTTCTTC
JMFF015P02+ AAGCTCTCTCCTTCTTCTTCTTCTTGTTTCCCTGTCCTCTACTCTTCTTC
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consensus GAAGTCCATTAAGCTCTCTCCTTCTTCTTCTTCTTGTTTCCCTGTCCTCTACTCTTCTTC

. : . : . : . : . : . :
JMSF050G04+ TTGTAGATGAACAGCTCTGAGAGTCTTCTGACCTAAGCCTGTGTTCTAACAACAACTAAT
JMFF021F10+ TTGTAGATGAACAGCTCTGAGAGTCTTCTGACCTAAGCCTGTGTTCTAACAACAACTAAT
JMFF010P05+ TTGTAGATGAACAGCTCTGAGAGTCTTCTGACCTAAGCCTGTGTTCTAACAACAACTAAT
JMSF004K03+ TTGTAGATGAACAGCTCTGAGAGTCTTCTGACCTAAGCCTGTGTTCTAACAACAACTAAT
JMFF021N10+ TTGTAGATGAACAGCTCTGAGAGTCTTCTGACCTAAGCCTGTGTTCTAACAACAACTAAT
JMFF017I02+ TTGTAGATGAACAGCTCTGAGAGTCTTCTGACCTAAGCCTGTGTTCTAACAACAACTAAT
JMFF048K01+ TTGTAGATGAACAGCTCTGAGAGTCTTCTGACCTAAGCCTGTGTTCTAACAACAACTAAT
JMFF015P02+ TTGTAGATGAACAGCTCTGAGAGTCTTCTGACCTAAGCCTGTGTTCTAACAACAACTAAT
____________________________________________________________
consensus TTGTAGATGAACAGCTCTGAGAGTCTTCTGACCTAAGCCTGTGTTCTAACAACAACTAAT

. : . : . : . : . : . :
JMSF050G04+ GATGTAAGCATGGAAATGTTTGGAGAGAAAGAGGAGACATTTTCCCCAGTTTTGCTTCCA
JMFF021F10+ GATGTAAGCATGGAAATGTTTGGAGAGAAAGAGGAGACATTTTCCCCAGTTTTGCTTCCA
JMFF010P05+ GATGTAAGCATGGAAATGTTTGGAGAGAAAGAGGAGACATTTTCCCCAGTTTTGCTTCCA
JMSF004K03+ GATGTAAGCATGGAAATGTTTGGAGAGAAAGAGGAGACATTTTCCCCAGTTTTGCTTCCA
JMFF021N10+ GATGTAAGCATGGAAGTGTTTGGAGAGAAAGAGGAGACATTTTCCCCAGTTTTGCTTCCA
JMFF017I02+ GATGTAAGCATGGAAATGTTTGGAGAGAAAGAGGAGACATTTTCCCCAGTTTTGCTTCCA
JMFF048K01+ GATGTAAGCATGGAAATGTTTGGAGAGAAAGAGGAGACATTTTCCCCAGTTTTGCTTCCA
JMFF015P02+ GATGTAAGCATGGAAATGTTTGGAGAGAAAGAGGAGACATTTTCCCCAGTTTTGCTTCCA
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consensus GATGTAAGCATGGAAATGTTTGGAGAGAAAGAGGAGACATTTTCCCCAGTTTTGCTTCCA

. : . : . : . : . : . :
JMSF050G04+ TCATTCCATTATTCCCTTTCTGCATTATTGGGTTTTGCTTGTTCTTGGTGGGTTCATAGG
JMFF021F10+ TCATTCCATTATTCCCTTTCTGCATTATTGGGTTTTGCTTGTTCTTGGTGGGTTCATAGG
JMFF010P05+ TCATTCCATTATTCCCTTTCTGCATTATTGGGTTTTGCTTGTTCTTGGTGGGTTCATAGG
JMSF004K03+ TCATTCCATTATTCCCTTTCTGCATTATTGGGTTTTGCTTGTTCTTGGTGGGTTCATAGG
JMFF021N10+ TCATTCCATTATTCCCTTTCTGCATTATTGGGTTTTGCTTGTTCTTGGTGGGTTCATAGG
JMFF017I02+ TCATTCCATTATTCCCTTTCTGCATTATTGGGTTTTGCTTGTTCTTGGTGGGTTCATAGG
JMFF048K01+ TCATTCCATTATTCCCTTTCTGCATTATTGGGTTTTGCTTGTTCTTGGTGGGTTCATAGG
JMFF015P02+ TCATTCCATTATTCCCTTTCTGCATTATTGGGTTTTGCTTGTTCTTGGTGGGTTCATAGG
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consensus TCATTCCATTATTCCCTTTCTGCATTATTGGGTTTTGCTTGTTCTTGGTGGGTTCATAGG

. : . : . : . : . : . :
JMSF050G04+ TGGATGAACTGAACTAAACTAGCAGTAATGGTGCCACCTAACAAGTACAAAAATGGAGTT
JMFF021F10+ TGGATGAACTGAACTAAACTAGCAGTAATGGTGCCACCTAACAAGTACAAAAATGGGGTT
JMFF010P05+ TGGATGAACTGAACTAAACTAGCAGTAATGGTGCCACCTAACAAGTACAAAAATGGAGTT
JMSF004K03+ TGGATGAACTGAACTAAACTAGCAGTAATGGTGCCACCTAACAAGTACAAAAATGGAGTT
JMFF021N10+ TGGATGAACTGAACTAAACTAGCAGTAATGGTGCCACCTAACAAGTACAAAAATGGAGTT
JMFF017I02+ TGGATGAACTGAACTAAACTAGCAGTAATGGTGCCACCTAACAAGTACAAAAATGGAGTT
JMFF048K01+ TGGATGAACTGAACTAAACTAGCAGTAATGGTGCCACCTAACAAGTACAAAAATGGAGTT
JMFF015P02+ TGGATGAACTGAACTAAACTAGCAGTAATGGTGCCACCTAACAAGTACAAAAATGGAGTT
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consensus TGGATGAACTGAACTAAACTAGCAGTAATGGTGCCACCTAACAAGTACAAAAATGGAGTT

. : . : . : . : . : . :
JMSF050G04+ TTTGCGCTTAAAAGATGTGAAAAGGGGTTCTCATGAGTCATGATGACTTGTTTCCCAGCT
JMFF021F10+ TTTGTGCTTAAAAGATGTGAAAAGGGGTTCTCATGAGTCATGATGACTTGTTTCCCAGCT
JMFF010P05+ TTTGTGCTTAAAAGATGTGAAAAGGGGTTCTCATGAGTCATGATGACTTGTTTCCCAGCT
JMSF004K03+ TTTGTGCTTAAAAGATGTGAAAAGGGGTTCTCATGAGTCATGATGACTTGTTTCCCAGCT
JMFF021N10+ TTTGTGCTTAAAAGATGTGAAAAGGGGTTCTCATGAGTCATGATGACTTGTTTCCCAGCT
JMFF017I02+ TTTGTGCTTAAAAGATGTGAAAAGGGGTTCTCATGAGTCATGATGACTTGTTTCCCAGCT
JMFF048K01+ TTTGTGCTTAAAAGATGTGAAAAGGGGTTCTCATGAGTCATGATGACTTGTTTCCCAGCT
JMFF015P02+ TTTGTGCTTAAAAGATGTGAAAAGGGGTTCTCATGAGTCATGATGACTTGTTTCCCAGCT
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consensus TTTGTGCTTAAAAGATGTGAAAAGGGGTTCTCATGAGTCATGATGACTTGTTTCCCAGCT

. : . : . : . : . : . :
JMSF050G04+ TGCTTTCTTTTCTGAACTGTTCTTGATCATCATCATCTTCTTCTTCTTCTTCTTCATTAC
JMFF021F10+ TGCTTTCTTTTCTGAACTGTTCTTGATCATCATCATCTTCTTCTTCTTCTTCTTCATTAC
JMFF010P05+ TGCTTTCTTTTCTGAACTGTTCTTGATCATCATCATCTTCTTCTTCTTCTTCTTCATTAC
JMSF004K03+ TGCTTTCTTTTCTGAACTGNTCTTGATCATCATCATCTTC
JMFF021N10+ TGCTTTCTTTTCTGAACTGTTCTTGATCATCATCATCTTCTTCTTCTTCTTCTTCATTAC
JMFF017I02+ TGCTTTCTTTTCTGAACTGTTCTTGATCATCATCATCTTCTTCTTCTTCTTCTTCATTAC
JMFF048K01+ TGCTTTCTTTTCTGAACTGTTCTTGATCATCATCATCTTCTTCTTCTTCTTCTTCATTAC
JMFF015P02+ TGCTTTCTTTTCTGAACTGTTCTTGATCATCATCATCTTCTTCTTCTTCTTCTTCATTAC
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consensus TGCTTTCTTTTCTGAACTGTTCTTGATCATCATCATCTTCTTCTTCTTCTTCTTCATTAC

. : . : . : . : . : . :
JMSF050G04+ TACAGTCCAAGAACAACAGCCCAAAGTTCTTGAAAGATTCCCCAGAAGTTTCAGTAAAAA
JMFF021F10+ TACGGTCCAAGAACAACAGCCCAAAGTTCTTGAAAGATTCCCCAGAAGTTTCAGTAAAAA
JMFF010P05+ TACAGTCCAAGAACAACAGCCCAAAGTTCTTGAAAGATTCCCCAGAAGTTTCAGTAAAAA
JMFF021N10+ TACAGTCCAAGAACAACAGCCCAAAGTTCTTGAAAGATTCCCCAGAAGTTTCAGTAAAAA
JMFF017I02+ TACAGTCCAAGAACAACAGCCCAAAGTTCTTGAAAGATTCCCCAGAAGTTTCAGTAAAAA
JMFF048K01+ TACAGTCCAAGAACAACAGCCCAAAGTTCTTGAAAGATTCCCCAGAAGTTTCAGTAAAAA
JMFF015P02+ TACAGTCCAAGAACAACAGCCCAAAGTTCTTGAAAGATTCCCCAGAAGTTTCAGTAAAAA
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consensus TACAGTCCAAGAACAACAGCCCAAAGTTCTTGAAAGATTCCCCAGAAGTTTCAGTAAAAA

. : . : . : . : . : . :
JMSF050G04+ GATTGGAATTTTGTCAGCAGATCAGAACAACCAGCCATGAAGAGATCATCACTTGGAGGC
JMFF021F10+ GATTGGAATTTTGTCAGCAGATCAGAACAACCAGCCATGAAGAGATCATCACTTGGAGGC
JMFF010P05+ GATTGGAATTTTGTCAGCAGATCAGAACAACCAGCCATGAAGAGATCATCACTTGGAGGC
JMFF021N10+ GATTGGAATTTTGTCAGCAGATC
JMFF017I02+ GATTGGAATTTTGTCAGCAGATCAGAACAACCAGCCATGAAGAGATCATCACTTGGAGGC
JMFF048K01+ GATTGGAATTTTGTCAGCAGATCAGAACAACCAGCCATGAAGA--TCATCACTTGGAGGC
JMFF015P02+ GATTGGAATTTTGTCAGCAGATCAGAACAACCAGCCATGAAGAGATCATCACTTGGAGGC
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consensus GATTGGAATTTTGTCAGCAGATCAGAACAACCAGCCATGAAGAGATCATCACTTGGAGGC

. : . : . : . : . : . :
JMSF050G04+ TCTGATTCCTTAGATGTTTACGGTAGGGAGTTCCGGTCAATGATGGAAGGTGTTGATGAG
JMFF021F10+ TCTGATTCCTTAGATGTT
JMFF010P05+ TCTGATTCCTTAGATG
JMFF017I02+ TCTGATTCCTTAGAT
JMFF048K01+ TCTGATTCCTTAGATGTTTACGGTAGGGAGTTCCGGTCAATGATGGAAGGTGTTGATGAG
JMFF015P02+ TCTGATTCCTTAGATGTTTACGGTAGGGAGTTCCGGTCAATGATGGAAGGTGTTGATGAG
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consensus TCTGATTCCTTAGATGTTTACGGTAGGGAGTTCCGGTCAATGATGGAAGGTGTTGATGAG

. : . : . : . : . : . :
JMSF050G04+ GAAGAAGGTGGCGGCGGCGGCGGCGGCGGCG
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consensus GAAGAAGGTGGCGGCGGCGGCGGCGGCGGCG