Alignment Contig 9381

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF028A11+ GGCCCTGCTCTGCCTGGGTGCTTTACTTTCTTCTTTTGCTCTCCTCTCTCTCTCTCTCTC
JMFF028G01+ GTGCTTTACTTTCTTCTTTTGCTCTCCTCTCTCTCTCTCTCTC
JMSF038E09+ GGCCCTGCTCTGCCTGGGTGCTTTACTTTCTTCTTTTGCTCTCCTCTCTCTCTCTCTCTC
JMSF033C10+ GGCCCTGCTCTGCCTGGGTGCTTTACTTTCTTCTTTTGCTCTCCTCTCTCTCTCTCTCTC
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consensus GGCCCTGCTCTGCCTGGGTGCTTTACTTTCTTCTTTTGCTCTCCTCTCTCTCTCTCTCTC

. : . : . : . : . : . :
JMSF028A11+ TCTCTACTTTCTCCTCCTTGTTTTTATTAGCTTCTTCTCAAATATTCTGTCCTTTTTCTC
JMFF028G01+ TCTCTACTTTCTCCTCCTTGTTTTTATTAGCTTCTTCTCAAATATTCTGTCCTTTTTCTC
JMSF038E09+ TCTCTACTTTCTCCTCCTTGTTTTTATTAGCTTCTTCTCAAATATTCTGTCCTTTTTCTC
JMSF033C10+ TCTCTACTTTCTCCTCCTTGTTTTTATTAGCTTCTTCTCAAATATTCTGTCCTTTTTCTC
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consensus TCTCTACTTTCTCCTCCTTGTTTTTATTAGCTTCTTCTCAAATATTCTGTCCTTTTTCTC

. : . : . : . : . : . :
JMSF028A11+ TTTTGCATTATCGTTCTTTCTTGTGTTTGATTCTTTGTGTGTAAGACAGTGAAACAGACG
JMFF028E18+ ATTATCGTTCTTTCTTGTGTTTGATTCTTTGTGTGTAAGACAGTGAAACAGACG
JMFF028G01+ TTTTGCATTATCGTTCTTTCTTGTGTTTGATTCTTTGTGTGTAAGACAGTGAAACAGACG
JMSF038E09+ TTTTGCATTATCGTTCTTTCNTGTGTTTGATTCTTTGTGTGTAAGACAGTGAAACAGACG
JMSF033C10+ TTTTGCATTATCGTTCTTTCTTGTGTTTGATTCTTTGTGTGTAAGACAGTGAAACAGACG
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consensus TTTTGCATTATCGTTCTTTCTTGTGTTTGATTCTTTGTGTGTAAGACAGTGAAACAGACG

. : . : . : . : . : . :
JMSF028A11+ AGTTCTTGGTGATCCTCCACCTTCACCAATGGCAATGGCAGAGATTGCTCACCCTCCTAT
JMFF028E18+ AGTTCTTGGTGATCCTCCACCTTCACCAATGGCAATGGCAGAGATTGCTCACCCTCCTAT
JMFF028G01+ AGTTCTTGGTGATCCTCCACCTTCACCAATGGCAATGGCAGAGATTGCTCACCCTCCTAT
JMSF038E09+ AGTTCTTGGTGATCCTCCACCTTCACCAATGGCAATGGCAGAGATTGCTCACCCTCCTAT
JMSF033C10+ AGTTCTTGGTGATCCTCCACCTTCACCAATGGCAATGGCAGAGATTGCTCACCCTCCTAT
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consensus AGTTCTTGGTGATCCTCCACCTTCACCAATGGCAATGGCAGAGATTGCTCACCCTCCTAT

. : . : . : . : . : . :
JMSF028A11+ GGAGCAACTCCNGGACCTCGAGTACTGCATAGACTCTAACCCTCCATGGCCTGAAACCAT
JMFF028E18+ GGAGCAACTCCAGGACCTCGAGTACTGCATAGACTCTAACCCTCCATGGCCTGAAACCAT
JMFF028G01+ GGAGCAACTCCAGGACCTCGAGTACTGCATAGACTCTAACCCTCCATGGCCTGAAACCAT
JMSF038E09+ GGAGCAACTCCNGGACCTCGAGTACTGCATAGACTCTAACCCTCCATGGCCTGAAACCAT
JMSF033C10+ GGAGCAACTCCNGGACCTCGAGTACTGCATAGACTCTAACCCTCCATGGCCTGAAACCAT
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consensus GGAGCAACTCCAGGACCTCGAGTACTGCATAGACTCTAACCCTCCATGGCCTGAAACCAT

. : . : . : . : . : . :
JMSF028A11+ ATTGTTAGCGTTTCAAAATTACATATTAGTACTTGGGACAAGTGCGATGATCCCTACACT
JMFF028E18+ ATTGTTAGCGTTTCAAAATTACATATTAGTACTTGGGACAAGTGCGATGATCCCTACACT
JMFF028G01+ ATTGTTAGCGTTTCAAAATTACATATTAGTACTTGGGACAAGTGCGATGATCCCTACACT
JMSF038E09+ ATTGTTAGCGTTTCAAAATTACATATTANTACTTGGGACAAGTGCGATGATCCCTACACT
JMSF033C10+ ATTGTTAGCGTTTCAAAATTACATATTAGTACTTGGGACAAGTGCGATGATCCCTACACT
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consensus ATTGTTAGCGTTTCAAAATTACATATTAGTACTTGGGACAAGTGCGATGATCCCTACACT

. : . : . : . : . : . :
JMSF028A11+ GCTTGTACCACTAATGGGTGGATCCGACGGGGACAAGGCACGGGTAATACAAACTTTGCT
JMFF028E18+ GCTTGTACCACTAATGGGTGGATCCGACGGGGACAAGGCACGGGTAATACAAACTTTGCT
JMFF028G01+ GCTTGTACCACTAATGGGTGGATCCGACGGGGACAAGGCACGGGTAATACAAACTTTGCT
JMSF038E09+ GCTTGTACCACTAATGGGTGGATCCGACGGGGACAAGGCACGGGTAATACAAACTTTGCT
JMSF033C10+ GCTTGTACCACTAATGGGTGGATCCGACGGGGACAAGGCACGGGTAATACAAACTTTGCT
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consensus GCTTGTACCACTAATGGGTGGATCCGACGGGGACAAGGCACGGGTAATACAAACTTTGCT

. : . : . : . : . : . :
JMSF028A11+ TTTTGTTGCTGGAATAAACACTCTTCTCCAAGCACTCTTTGGAACCCGATTGCCAGCTGT
JMFF028E18+ TTTTGTTGCTGGAATAAACACTCTTCTCCAAGCACTCTTTGGAACCCGATTGCCAGC
JMFF028G01+ TTTTGTTGCTGGAATAAACACTCTTCTCCAAGCACTCTTTGGAACCCGATTGCCAG
JMSF038E09+ TTTTGTTGCTGGAATAAACACTCTTCTCCAAGCACTCTTTGGAACCCGATTGCCAGCTGT
JMSF033C10+ TTTTGTTGCTGGAATAAACACTCTTCTCCAAGCACTCTTTGGAACCCGATTGCCAGCTGT
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consensus TTTTGTTGCTGGAATAAACACTCTTCTCCAAGCACTCTTTGGAACCCGATTGCCAGCTGT

. : . : . : . : . : . :
JMSF028A11+ AGTTGGAGGATCCTTTGCATATGTTATCCCCATAGTCTATATTATTAGCGATTCATCTCT
JMSF038E09+ AGTTGGAGGATCCTTTGCATATGTTATCCCCATAGTCTATATTATTAGCGATTCATCTCT
JMSF033C10+ AGTTGGAGGATCCTTTGCATATGTTATCCCCATAGTCTATATTATTAGCGATTCATCTCT
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consensus AGTTGGAGGATCCTTTGCATATGTTATCCCCATAGTCTATATTATTAGCGATTCATCTCT

. : . : . : . : . : . :
JMSF028A11+ TCAACGGATAAGTGAGCCACATATAAGATTTATACAAACCATGAGGGCGATCCAAGGAGC
JMSF038E09+ TCAACGGATAAGTGAGCCACATATAAGATTTATACAAACCATGAGGGCGATCCAAGGAGC
JMSF033C10+ TCAACGGATAAGTGAGCCACATATAAGATTTATACAAACCATGAGGGCGATCCAAGGAGC
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consensus TCAACGGATAAGTGAGCCACATATAAGATTTATACAAACCATGAGGGCGATCCAAGGAGC

. : . : . : . : . : . :
JMSF028A11+ GTTGATTGTTGCGTCAAGCATTCAAATAATCTTGGGGTACAGCCAAGTTTGGGGTCTGTT
JMSF038E09+ GTTGATTGTTGCGTCAAGCATTCAAATAATCNTGGGGTACAGCCAAGTTTGGGGTCTGTT
JMSF033C10+ GTTGATTGTTGCGTCAAGCATTCAAATAATCTTGGGGTACAGCCAAGTTTGGGGTCTGTT
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consensus GTTGATTGTTGCGTCAAGCATTCAAATAATCTTGGGGTACAGCCAAGTTTGGGGTCTGTT

. : . : . : . : . : . :
JMSF028A11+ TTCACGTTTTTTCAG
JMSF038E09+ TTCACG
JMSF033C10+ TTCACGTTTTTTCAGT
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consensus TTCACGTTTTTTCAGT