Alignment Contig 8845

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFF039P20+ GACTAAAAGCCTATAAGTGATAACGGTGCCAAAAAACTCTGCCTATCAAATCCAGAATCC
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consensus GACTAAAAGCCTATAAGTGATAACGGTGCCAAAAAACTCTGCCTATCAAATCCAGAATCC

. : . : . : . : . : . :
JMFF039P20+ AAACAAAATATACATAACAAGTTGCTTTCAGTTCAGAATTCTGATTGTGTTAATTCAGGT
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consensus AAACAAAATATACATAACAAGTTGCTTTCAGTTCAGAATTCTGATTGTGTTAATTCAGGT

. : . : . : . : . : . :
JMFF039P20+ TCACGCCTTTACGTTAAAGCCAAATTCCAGAATTCACGTGCCCTGCTCCAGAGAAATGAA
JMFF047L05+ TGCTCCAGAGAAATGAA
JMFF021F11+ TGCTCCAGAGAAATGAA
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consensus TCACGCCTTTACGTTAAAGCCAAATTCCAGAATTCACGTGCCCTGCTCCAGAGAAATGAA

. : . : . : . : . : . :
JMFF039P20+ TGCATAGTATGCAGTAGCACAGCTTTGCAGTAATTTTTAGGAGAAAAGGAGAAAAGATAG
JMFF047L05+ TGCATAGTATGCAGTAGCACAGCTTTGCAGTAATTTTTAGGAGAAAAGGAGAAAAGATAG
JMSF014F16+ GGAGAAAAGGAGAAAAGATAG
JMFF021F11+ TGCATAGTATGCAGTAGCACAGCTTTGCAGTAATTTTTAGGAGAAAAGGAGAAAAGATAG
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consensus TGCATAGTATGCAGTAGCACAGCTTTGCAGTAATTTTTAGGAGAAAAGGAGAAAAGATAG

. : . : . : . : . : . :
JMFF039P20+ AATCTTGGGGAGGTTTTGAGAAATGGGTATTTTGGGGTTGTGTGGAATCTTGATATTTGG
JMFF047L05+ AATCTTGGGGAGGTTTTGAGAAATGGGTATTTTGGGGTTGTGTGGAATCTTGATATTTGG
JMSF014F16+ AATCTTGGGGAGGTTTTGAGAAATGGGTATTTTGGGGTTGTGTGGAATCTTGATATTTGG
JMFF021F11+ AATCTTGGGGAGGTTTTGAGAAATGGGTATTTTGGGGTTGTGTGGAATCTTGATATTTGG
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consensus AATCTTGGGGAGGTTTTGAGAAATGGGTATTTTGGGGTTGTGTGGAATCTTGATATTTGG

. : . : . : . : . : . :
JMFF039P20+ GCTTTTGGTTGGTGGGGAAGGGTACCCAGAGGAGGATCTGGTGAAGGGCTTGCCTGGGCA
JMFF047L05+ GCTTTTGGTTGGTGGGGAAGGGTACCCAGAGGAGGATCTGGTGAAGGGCTTGCCTGGGCA
JMSF014F16+ GCTTTTGGTTGGTGGGGAAGGGTACCCAGAGGAGGATCTGGTGAAGGGCTTGCCTGGGCA
JMFF021F11+ GCTTTTGGTTGGTGGGGAAGGGTACCCAGAGGAGGATCTGGTGAAGGGCTTGCCTGGGCA
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consensus GCTTTTGGTTGGTGGGGAAGGGTACCCAGAGGAGGATCTGGTGAAGGGCTTGCCTGGGCA

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JMFF039P20+ GCCAAAGGTTGGGTTCAAGCAGTATGCTGGGTATGTTGATGTGGATTTGAAAGCTGGGAG
JMFF047L05+ GCCAAAGGTTGGGTTCAAGCAGTATGCTGGGTATGTTGATGTGGATTTGAAAGCTGGGAG
JMSF014F16+ GCCAAAGGTTGGGTTCAAGCAGTATGCTGGGTATGTTGATGTGGATTTGAAAGCTGGGAG
JMFF021F11+ GCCAAAGGTTGGGTTCAAGCAGTATGCTGGGTATGTTGATGTGGATTTGAAAGCTGGGAG
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consensus GCCAAAGGTTGGGTTCAAGCAGTATGCTGGGTATGTTGATGTGGATTTGAAAGCTGGGAG

. : . : . : . : . : . :
JMFF039P20+ GAGCTTGTTTTACTACTTTGTTGAAGCTGAAGTGAACCCTAGGCTTAAGCCCCTCACTCT
JMFF047L05+ GAGCTTGTTTTACTACTTTGTTGAAGCTGAAGTGAACCCTAGGCTTAAGCCCCTCACTCT
JMSF014F16+ GAGCTTGTTTTACTACTTTGTTGAAGCTGAAGTGAACCCTAGGCTTAAGCCCCTCACTCT
JMFF021F11+ GAGCTTGTTTTACTACTTTGTTGAAGCTGAAGTGAACCCTAGGCTTAAGCCCCTCACTCT
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consensus GAGCTTGTTTTACTACTTTGTTGAAGCTGAAGTGAACCCTAGGCTTAAGCCCCTCACTCT

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JMFF039P20+ TTGGTTAAATGGAGGCCCAGGCTGCTCTTCAGTTGGTGGAGGAGCATTTACAGAGCTGGG
JMFF047L05+ TTGGTTAAATGGAGGCCCAGGCTGCTCTTCAGTTGGTGGAGGAGCATTTACAGAGCTGGG
JMSF014F16+ TTGGTTAAATGGAGGCTCAGGCTGCTCTTCAGTTGGTGGAGGAGCATTTACAGAGCTGGG
JMFF021F11+ TTGGTTAAATGGAGGCCCAGGCTGCTCTTCAGTTGGNGGAGGAGCATTTACAGAGCTGGG
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consensus TTGGTTAAATGGAGGCCCAGGCTGCTCTTCAGTTGGTGGAGGAGCATTTACAGAGCTGGG

. : . : . : . : . : . :
JMFF039P20+ GCCATTCTATCCCAC
JMFF047L05+ GCCATTCTATCCCACTGGGGATGGTCGAGGCCTTCGAAGAAATTCTAAATCATGGAATAA
JMSF014F16+ GCCATTCTATCCCACTGGGGATGGTCGAGGCCTTCGAAGAAATTCTAAATCATGGAATAA
JMFF021F11+ GCCATTCTATCCCACTGGGGATGGTCGAGGCCTTCGAAGAAATTCTAAATCATGGAATAA
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consensus GCCATTCTATCCCACTGGGGATGGTCGAGGCCTTCGAAGAAATTCTAAATCATGGAATAA

. : . : . : . : . : . :
JMFF047L05+ AGCATCGAATCTCCTTTTTGTTGAGTCTCCTGCTGGTGTAGGATGGTCTTATTCAAATAC
JMSF014F16+ AGCATCGAATCTCCTTTTTGTTGAGTCTCCTGCTGGTGTAGGATGGTCTTATTCAAATAC
JMFF021F11+ AGCATCGAATCTCCTTTTTGTTGAGTCTCCTGCTGGTGTAGGATGGTCTTATTCAAATAC
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consensus AGCATCGAATCTCCTTTTTGTTGAGTCTCCTGCTGGTGTAGGATGGTCTTATTCAAATAC

. : . : . : . : . : . :
JMFF047L05+ AAGTTCAGACTACATATGTGGAGATGCCTCAACTGCAAGTGATATGCATATATTCATGGT
JMSF014F16+ AAGTTCAGACTACATATGTGGAGATGCCTCAACTGCAAGTGATATGCATATATTCATGGT
JMFF021F11+ AAGTTCAGACTACATATGTGGAGATGCCTCAACTGCAAGTGATATGCATATATTCATGGT
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consensus AAGTTCAGACTACATATGTGGAGATGCCTCAACTGCAAGTGATATGCATATATTCATGGT

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JMFF047L05+ GGAATGGTTCAAGAAGTTCCCATCATACAAATCCAGAGATTTGTTTCT
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consensus GGAATGGTTCAAGAAGTTCCCATCATACAAATCCAGAGATTTGTTTCT