Alignment Contig 8772

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFF017E16+ ATTTTCAATTTTTCCAGTTTTTCTTTGCATACTAGTCCGTTTGATCGGTCAATCGTGCTT
JMFF004F08+ TTTCAATTTTTCCAGTTTTTCTTTGCATACTAGTCCGTTTGATCGGTCAATCGTGCTT
____________________________________________________________
consensus ATTTTCAATTTTTCCAGTTTTTCTTTGCATACTAGTCCGTTTGATCGGTCAATCGTGCTT

. : . : . : . : . : . :
JMFF017E16+ CTAGATTGGCGGCAGCGGCGGCTGTTATCGGCTTTTGGTTGTTG------------GGAA
JMFF004F08+ CTAGATTGGCGGCAGCGGCGGCTGTTATCGGCTTTTGGTTGTTG------------GGAA
JMFF018I04+ AGATCGGTGCGGCTGTTATCGGGTTTTGGTTGCGGTTCGAGTATACGGGAA
JMFF047C18+ GGGAA
JMFF024D21+ GGGAA
JMSF016P04+ GCGGCTGTTATCGGGTTTTGGTTGCGGTTCGAGTATACGGGAA
JMFF049J03+ GGGAA
____________________________________________________________
consensus CTAGATTGGCGGCAGCGGCGGCTGTTATCGGCTTTTGGTTGCGGTTCGAGTATACGGGAA

. : . : . : . : . : . :
JMFF017E16+ ATACAAATGGCTATGCTAATAGCTGCTCGTCGAGTAACAGGTGGATCGACGAGGTCCGTT
JMFF004F08+ ATACAAATGGCTATGCTAATAGCTGCTCGTCGAGTAACAGGTGGATCGACGAGGTCCGTT
JMFF018I04+ ACACAAATGGCTATGCTAATAGCTGCCCGTCGAGTAACATGTGGATCGACGAGGTCCATC
JMFF047C18+ ACACAAATGGCTATGCTAATAGCTGCCCGTCGAGTAACATGTGGATCGACGAGGTCCATC
JMFF024D21+ ACACAAATGGCTATGCTAATAGCTGCCCGTCGAGTAACATGTGGATCGACGAGGTCCATC
JMSF016P04+ ACACAAATGGCTATGCTAATAGCTGCCCGTCGAGTAACATGTGGATCGACGAGGTCCATC
JMFF049J03+ ACACAAATGGCTATGCTAATAGCTGCCCGTCGAGTAACATGTGGATCGACGAGGTCCATC
JMSF027O01+ GAGTAACAGGTGGATCGACGAGGTCCGTT
____________________________________________________________
consensus ACACAAATGGCTATGCTAATAGCTGCCCGTCGAGTAACATGTGGATCGACGAGGTCCATC

. : . : . : . : . : . :
JMFF017E16+ TCTTCAGAGTCGCTGCGTTATACGACGTGCTGGAGATATTTCTCTACTTCCTTCCGGGAG
JMFF004F08+ TCTTCAGAGTCGCTGCGTTATACGACGTGCTGGAGATATTTCTCTACTTCCTTCCGGGAG
JMFF018I04+ TCTTCCGAGTCGCTGCGTTATACGGTGTGCTGGAGATATTTCTCTACTTCATTCCGAGAG
JMFF047C18+ TCTTCCGAGTCGCTGCGTTATACGGTGTGCTGGAGATATTTCTCTACTTCATTCCGAGAG
JMFF024D21+ TCTTCCGAGTCGCTGCGTTATACGGTGTGCTGGAGATATTTCTCTACTTCATTCCGAGAG
JMSF016P04+ TCTTCCGAGTCGCTGCGTTATACGGTGTGCTGGAGATATTTCTCTACTTCATTCCGAGAG
JMFF049J03+ TCTTCCGAGTCGCTGCGTTATACGGTGTGCTGGAGATATTTCTCTACTTCATTCCGAGAG
JMSF027O01+ TCTTCAGAGTCGCTGCGTTATACGACGTGCTGGAGATATTTCTCTACTTCCTTCCGGGAG
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consensus TCTTCCGAGTCGCTGCGTTATACGGTGTGCTGGAGATATTTCTCTACTTCATTCCGAGAG

. : . : . : . : . : . :
JMFF017E16+ GAGAGAGATACTTTCGGCCCCATTCAAGTCCCCTCCGACAAGTTATGGGGGGCACAAACT
JMFF004F08+ GAGAGAGATACTTTCGGCCCCATTCAAGTCCCCTCCGACAAGTTATGGGGGGCACAAACT
JMFF018I04+ GAGAGAGACACTTTCGGCCCCATTCAAGTCCCCTCCGACAAGTTATGGGGGGCACAAACT
JMFF047C18+ GAGAGAGACACTTTCGGCCCCATTCAAGTCCCCTCCGACAAGTTATGGGGGGCACAAACT
JMFF024D21+ GAGAGAGACACTTTCGGCCCCATTCAAGTCCCCTCCGACAAGTTATGGGGGGCACAAACT
JMSF016P04+ GAGAGAGACACTTTCGGCCCCATTCAAGTCCCCTCCGACAAGTTATGGGGGGCACAAACT
JMFF049J03+ GAGAGAGACACTTTCGGCCCCATTCAAGTCCCCTCCGACAAGTTATGGGGGGCACAAACT
JMSF027O01+ GAGAGAGATACTTTCGGCCCCATTCAAGTCCCCTCCGACAAGTTATGGGGGGCACAAACT
____________________________________________________________
consensus GAGAGAGACACTTTCGGCCCCATTCAAGTCCCCTCCGACAAGTTATGGGGGGCACAAACT

. : . : . : . : . : . :
JMFF017E16+ CAAAGATCATTGCAGAACTTTGAAATTGGCGGTGACAGGGAAAGAATGCCTGAACCTATT
JMFF004F08+ CAAAGATCATTGCAGAACTTTGAAATTGGCGGTGACAGGGAAAGAATGCCTGAACCTATT
JMFF018I04+ CAAAGATCATTGCAGAACTTTGAAATTGGTGGTGACAGGGAAAGAATGCCTGAACCTATT
JMFF047C18+ CAAAGATCATTGCAGAACTTTGAAATTGGTGGTGACAGGGAAAGAATGCCTGAACCTATT
JMFF024D21+ CAAAGATCATTGCAGAACTTTGAAATTGGTGGTGACAGGGAAAGAATGCCTGAACCTATT
JMSF016P04+ CAAAGATCATTGCAGAACTTTGAAATTGGTGGTGACAGGGAAAGAATGCCTGAACCTATT
JMFF049J03+ CAAAGATCATTGCAGAACTTTGAAATTGGTGGTGACAGGGAAAGAATGCCTGAACCTATT
JMSF027O01+ CAAAGATCATTGCAGAACTTTGAAATTGGCGGTGACAGGGAAAGAATGCCTGAACCTATT
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consensus CAAAGATCATTGCAGAACTTTGAAATTGGTGGTGACAGGGAAAGAATGCCTGAACCTATT

. : . : . : . : . : . :
JMFF017E16+ ATACGTGCATTTGGTGTTCTTAAGAAGTGTGCAGCCAAGGTGAATATGGAGTATGGCCTT
JMFF004F08+ ATACGTGCATTTGGTGTTCTTAAGAAGTGTGCAGCCAAGGTGAATATGGAGTATGGCCTT
JMFF018I04+ ATTCGGGCATTTGGTATTCTTAAGAAATGTGCAGCCAAGGTGAATATGGAGTATGGCCTT
JMFF047C18+ ATTCGGGCATTTGGTATTCTTAAGAAATGTGCAGCCAAGGTGAATATGGAGTATGGCCTT
JMFF024D21+ ATTCGGGCATTTGGTATTCTTAAGAAATGTGCAGCCAAGGTGAATATGGAGTATGGCCTT
JMSF016P04+ ATTCGGGCATTTGGTATTCTTAAGAAATGTGCAGCCAAGGTGAATATGGAGTATGGCCTT
JMFF049J03+ ATTCGGGCATTTGGTATTCTTAAGAAATGTGCAGCCAAGGTGAATATGGAGTATGGCCTT
JMSF027O01+ ATACGTGCATTTGGTGTTCTTAAGAAGTGTGCAGCCAAGGTGAATATGGAGTATGGCCTT
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consensus ATTCGGGCATTTGGTATTCTTAAGAAATGTGCAGCCAAGGTGAATATGGAGTATGGCCTT

. : . : . : . : . : . :
JMFF017E16+ GAGCCATCCATAGGGAAAGCAGTAATGCAGGCTGCCCAAGAAGTTGCTGAAGGAAAACTA
JMFF004F08+ GAGCCATCCATAGGGAAAGCAGTAATGCAGGCTGCCCAAGAAGTTGCTGAAGGAAAACTA
JMFF018I04+ GAGCCATCCATAGGGAAGGCAGTAATGCAGGCTGCCCAAGAAGTTGCTGAAGGAAAACTA
JMFF047C18+ GAGCCATCC
JMFF024D21+ GAGCCATCCATAGGGAAGGCAGTAATGCAGGCTGCCCAAGAAGTTGCTGAAGGAAAACTA
JMSF016P04+ GAGCCATCCATAGGGAAGGCAGTAATGCAGGCTGCCCAAGAAGTTGCTGAAGGAAAACTA
JMFF049J03+ GAGCCATCCATAGGGAAGGCAGTAATGCAGGCTGCCCAAGAAGTTGCTGAAGGAAAACTA
JMSF027O01+ GAGCCATCCATAGGGAAAGCAGTAATGCAGGCTGCCCAAGAAGTTGCTGAAGGAAAACTA
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consensus GAGCCATCCATAGGGAAGGCAGTAATGCAGGCTGCCCAAGAAGTTGCTGAAGGAAAACTA

. : . : . : . : . : . :
JMFF017E16+ AATGACCATTTTCCTTTGGTGGTTTGGCAGACTGGTAGTGGCACACAAAGTAACATGAAT
JMFF004F08+ AATGACCATTTTCCTTTGGTGGTTTGGCAGACTGGTAGTGGCACACAAAGTAACATGAAT
JMFF018I04+ AATGACCATTTTCCTTTGGTGATTTGGCAGACTGGTAGTGGAACACAAAGTAACATGAAT
JMFF024D21+ AATGACCATTTTCCTTTGGTGATTTGGCAGACTGGTAGTGGAACACAAAGTAACATGAAT
JMSF016P04+ AATGACCATTTTCCTTTGGTGATTTGGCAGACTGGTAGTGGAACACAAAGTAACATGAAT
JMFF049J03+ AATGACCATTTTCCTTTGGTGATTTGGCAGACTGGTAGTGGAACACAAAGTAACATGAAT
JMSF027O01+ AATGACCATTTTCCTTTGGTGGTTTGGCAGACTGGTAGTGGCACACAAAGTAACATGAAT
____________________________________________________________
consensus AATGACCATTTTCCTTTGGTGATTTGGCAGACTGGTAGTGGAACACAAAGTAACATGAAT

. : . : . : . : . : . :
JMFF017E16+ GCCAATGAGGTTATAGCAAACAGAGCAGCTGAAATTCTTGGTCATAAACGAGGTGAAAAA
JMFF004F08+ GCCAATG
JMFF018I04+ GCCAATGAGGTTATAGCAAACAGAGCAGCTGAAATTCTTGGTCATAAACGAGGTGAAAAA
JMSF016P04+ GCCAAT
JMFF049J03+ GCCAATGAGGTTATAGCAAACAGAGCAGCTGAAATTCTTGGTCATAAACGAGGTGAAAAA
JMSF027O01+ GCCAATGAGGTTATAGCAAACAGAGCAGCTGAAATTCTTGGTCATAAACGAGGTGAAAAA
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consensus GCCAATGAGGTTATAGCAAACAGAGCAGCTGAAATTCTTGGTCATAAACGAGGTGAAAAA

. : . : . : . : . : . :
JMFF017E16+ GCTGTACACCCAAATGACCATGTGA
JMFF018I04+ GGTGTACACCCAAATGACCATGTGAACAGATCACAATCTTCCAATGATACATTTCCTACT
JMFF049J03+ GGTGTACACCCAAATGACCATGTGAACAGATCACAATCTTCCAATGATACATTTCCTACT
JMSF027O01+ GCTGTACACCCAAATGACCATGTGAACAGATCACAATCTTCCAATGACACATTTCCTACT
____________________________________________________________
consensus GCTGTACACCCAAATGACCATGTGAACAGATCACAATCTTCCAATGATACATTTCCTACT

. : . : . : . : . : . :
JMFF018I04+ GTGATGCATATCGCAGCTGCAATGGAAATTAATAAGA
JMFF049J03+ GTGATGCATATC
JMSF027O01+ GTGATGCATATCGCAGCTGCAATGGAGATTAATAAGAGATTATTGCCAAACCTGAAACAA
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consensus GTGATGCATATCGCAGCTGCAATGGAAATTAATAAGAGATTATTGCCAAACCTGAAACAA

. : . : . : . : . : . :
JMSF027O01+ CTGCATACTTCACTACATTCAAAGTCTGTTGAATTCAAGGACATCATCAAAATTGGGCGT
____________________________________________________________
consensus CTGCATACTTCACTACATTCAAAGTCTGTTGAATTCAAGGACATCATCAAAATTGGGCGT

. : . : . : . : . : . :
JMSF027O01+ ACTCA
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consensus ACTCA