Alignment Contig 7767

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF007G24+ GAGAATTAGCAGTTTGACTTGGGTCGTCTACCTTCAAATGGGGAGTTGTAACAGCATACC
JMSF010F22+ AGAATTAGCAGTTTGACTTGGGTCGTCTACCTTCAAATGGGGAGTTGTAACAGCATACC
JMSF028G05+ AGAATTAGCAGTTTGACTTGGGTCGTCTACCTTCAAATGGGGAGTTGTAACAGCATACC
JMFF021B11+ AGAATTAGCAGTTTGACTTGGGTCGTCTACCTTCAAATGGGGAGTTGTAACAGCATACC
JMFF016P06+ ATTAGCAGTTTGACTTGGGTCGTCTACCTTCAAATGGGGAGTTGTAACAGCATACC
JMFF003C03+ GGGTCGTCTACCTTCNAATGGGGAGTTGTAACAGCATACC
JMFF002D16+ GGGTCGTCTACCTTCAAATGGGGAGTTGTAACAGCATACC
JMFF014L14+ CGTCTACCTTCAAATGGGGAGTTGTAACAGCATACC
JMFF015C21+ GGGTCGTCTACCTTCAAATGGGGAGTTGTAACAGCATACC
____________________________________________________________
consensus GAGAATTAGCAGTTTGACTTGGGTCGTCTACCTTCAAATGGGGAGTTGTAACAGCATACC

. : . : . : . : . : . :
JMSF007G24+ TTCGTCGCCC-TTTGCCGCCACTTCAGCCGGCGGAGAAAGCGATCCACCGCCGCCGAAAA
JMSF010F22+ TTCGTCGCCC-TTTGCCGCCACTTCAGCCGGCGGAGAAAGCGATCCACCGCCGCCAAAAA
JMSF028G05+ TTCGTCGCCC-TTTGCCGCCACTTCAGCCGGCGGAGAAAGCGATCCACCGCCGCCGAAAA
JMFF021B11+ TTCGTCGCCC-TTTGCCGCCACTTCAGCCGGCGGAGAAAGCGATCCACCGCCGCCGAAAA
JMFF016P06+ TTCGTCGCCC-TTTGCCGCCACTTCAGCCGGCGGAGAAAGCGATCCACCGCCGCCGAAAA
JMFF003C03+ TTCGNCGCCCCTTTGCCGCCACTTCAGCCGGCGGAGAAAGCGATCCACCGCCGNCGAAAN
JMFF002D16+ TTCGTCGCCC-TTTGCCGCCACTTCAGCCGGCGGAGAAAGCGATCCACCGCCGCCGAAAA
JMFF014L14+ TTCGTCGCCC-TTTGCCGCCACTTCAGCCGGCGGAGAAAGCGATCCACCGCCGCCGAAAA
JMFF015C21+ TTCGTCGCCC-TTTGCCGCCACTTCAGCCGGCGGAGAAAGCGATCCACCGCCGCCGAAAA
____________________________________________________________
consensus TTCGTCGCCC-TTTGCCGCCACTTCAGCCGGCGGAGAAAGCGATCCACCGCCGCCGAAAA

. : . : . : . : . : . :
JMSF007G24+ ATGACATCACCGTCCTTCCGCCCTCCCAGCCTCCCCCTCCACGTCCCTTCCTCTCCGGCG
JMSF010F22+ ATGACATCACCGTCCTTCCGCCCTCCCAGCCTCCCCCTCCACGTCCCTTCCTCTCCGGCG
JMSF028G05+ ATGACATCACCGTCCTTCCGCCCTCCCAGCCTCCCCCTCCACGTCCCTTCCTCTCCGGCG
JMFF021B11+ ATGACATCACCGTCCTTCCGCCCTCCCAGCCTCCCCCTCCACGTCCCTTCCTCTCCGGCG
JMFF016P06+ ATGACATCACCGTCCTTCCGCCCTCCCAGCCTCCCCCTCCACGTCCCTTCCTCTCCGGCG
JMFF003C03+ ATGACAT
JMFF002D16+ ATGACATCACCGTCCTTCCGCCCTCCCAGCCTCCCCCTCCACGTCCCTTCCTCTCCGGCG
JMFF014L14+ ATGACATCACCGTCCTTCCGCCCTCCCAGCCTCCCCCTCCACGTCCCTTCCTCTCCGGCG
JMFF015C21+ ATGACATCACCGTCCTTCCGCCCTCCCAGCCTCCCCCTCCACGTCCCTTCCTCTCCGGCG
____________________________________________________________
consensus ATGACATCACCGTCCTTCCGCCCTCCCAGCCTCCCCCTCCACGTCCCTTCCTCTCCGGCG

. : . : . : . : . : . :
JMSF007G24+ TCGGCCGCGTCCTTGGGCGCCCCATGGAGGACGTCCACTCCACCTACATTTTTGGGGGGG
JMSF010F22+ TCGGCCGCGTCCTTGGGCGCCCCATGGAGGACGTCCACTCCACCTACATTTTTGGGGGGG
JMSF028G05+ TCGGCCGCGTCCTTGGGCGCCCCATGGAGGACGTCCACTCCACCTACATTTTTGGGGGGG
JMFF021B11+ TCGGCCGCGTCCTTGGGCGCCCCATGGAGGACGTCCACTCCACCTACATTTTTGGGGGGG
JMFF016P06+ TCGGCCGCGTCCTTGGGCGCCCCATGGAGGACGTCCACTCCACCTACATTTTTGGGGGGG
JMFF002D16+ TCGGCCGCGTCCTTGGGCGCCCCATGGAGGACGTCCACTCCACCTACATTTTTGGGGGGG
JMFF014L14+ TCGGCCGCGTCCTTGGGCGCCCCATGGAGGACGTCCACTCCACCTACATTTTTGGGGGGG
JMFF015C21+ TCGGCCGCGTCCTTGGGCGCCCCATGGAGGACGTCCACTCCACCTACATTTTTGGGGGGG
____________________________________________________________
consensus TCGGCCGCGTCCTTGGGCGCCCCATGGAGGACGTCCACTCCACCTACATTTTTGGGGGGG

. : . : . : . : . : . :
JMSF007G24+ -AGCTAGGTCGGGGACAGTTCGGGGTCACCTACCTAGTCA
JMSF010F22+ -AGCTAGGTCGGGGACAGTTCGGGGTCACCTACCTAGTCACCCACCGCAAGACGCGCGAG
JMSF028G05+ -AGCTAGGTCGGGGACAGTTCGGGGTCACCTACCTAGTCACCCACCGCAAGACGCGCGAG
JMFF021B11+ -AGCTAGGTCGGGGACAGTTCGGGGTCACCTACCTAGTCACCCACCGCAAGACGCGCGAG
JMFF016P06+ -AGCTAGGTCGGGGACAGTTCGGGGTCACCTACCTAGTCACCCACCGCAAGACGCGCGAG
JMFF002D16+ -AGCTAGGTCGGGGACAGTTCGGGGTCACCTACCTAGTCACCCACCGCAAGACGCGCGAG
JMFF014L14+ -AGCTAGGTCGGGGACAGTTCGGGGTCACCTACCTAGTCACCCACCGCAAGACGCGCGAG
JMFF015C21+ GAGCTAGGTCGGGGACAGTTCGGGGTCACCTACCTAGTCACCCACCGCAAGACGCGCGAG
____________________________________________________________
consensus -AGCTAGGTCGGGGACAGTTCGGGGTCACCTACCTAGTCACCCACCGCAAGACGCGCGAG

. : . : . : . : . : . :
JMSF010F22+ CGCCTCGCCTGCAAGTCAATCGCCACGCGCAAGCTTCTCTCCA
JMSF028G05+ CGCCTCGCCTGCAAGTCAATCGCCACGCGCAAGCTTCTCTCCAAGGACGACGTTGACGAT
JMFF021B11+ CGCCTCGCCTGCAAGTCAATCGCCACGCGCAAGCTTCTCTCCAAGGACGACGTTGACGAT
JMFF016P06+ CGCCTCGCCTGCAAGTCAATCGCCACGCGCAAGCTTCTCTCCAAGGACGACGTTGACGAT
JMFF002D16+ CGCCTCGCCTGCAAGTCAATCGCCACGCGCAAGCTTCTCTCCAAGGACGACGTTGACGAT
JMFF014L14+ CGCCTCGCCTGCAAGTCAATCGCCACGCGCAAGCTTCTCTCCAAGGACGACGTTGACGAT
JMFF015C21+ CGCCTCGCCTGCAAGTCAATCGCCACGCGCAAGCTTCTCTCCAAGGACGACGTTGACGAT
____________________________________________________________
consensus CGCCTCGCCTGCAAGTCAATCGCCACGCGCAAGCTTCTCTCCAAGGACGACGTTGACGAT

. : . : . : . : . : . :
JMSF028G05+ GTCCGGCGTGAGGTCCAGATTATGCACCACCTCACCGGCCACCGCAACATCGTCGAGCTC
JMFF021B11+ GTCCGGCGTGAGGTCCAGATTATGCACCACCTCACCGGCCACCGCAACATCGTCGAGCTC
JMFF016P06+ GTCCGGCGTGAGGTCCAGATTATGCACCACCTCACCGGCCACCGCAACATCGTCGAGCTC
JMFF002D16+ GTCCGG
JMFF014L14+ GTCCGGCGTGAGGTCCAGATTATGCACCACCTCACCGGCCACCGCAACATCGTCGAGCTC
JMFF015C21+ GTCCGGCGTGAGGTCCAGATTATGCACCACCTCACCGGCCACCGCAACATCGTCGAGCTC
____________________________________________________________
consensus GTCCGGCGTGAGGTCCAGATTATGCACCACCTCACCGGCCACCGCAACATCGTCGAGCTC

. : . : . : . : . : . :
JMSF028G05+ AAGGGAACCTATGAGGACCGCAACCACGTCCACCTAGTCATGGAG-CTCTGCGCTGGCGG
JMFF021B11+ AAGGGAACCTATGAGGACCGCAACCACGTCCACCTAGTCATGGAG-CTCTGCGCTGGCGG
JMFF016P06+ AAGGGAACCTATGAGGACCGCAACCACGTCCACCTAGTCATGGAG-CTCTGCGCTGGCGG
JMFF014L14+ AAGGGAACCTATGAGGACCGCAACCACGTCCACCTAGTCATGGAGNCTCTGCGCTGGCGG
JMFF015C21+ AAGGGAACCTATGAGGACCGCAACCACGTCCACCTAGTCATGGAG-CTCTGCGCTGGCGG
____________________________________________________________
consensus AAGGGAACCTATGAGGACCGCAACCACGTCCACCTAGTCATGGAG-CTCTGCGCTGGCGG

. : . : . : . : . : . :
JMSF028G05+ CGAGCTCTTCGACCGTATCATCGCCAAGGGCCACTACTCCGAACGCGCCGCCGCCGGCCT
JMFF021B11+ CGAGCTCTTCGACCGTATCATCGCCAAGGGCCACTACTCCGAACGCGCCGCCGCCGGCCT
JMFF016P06+ CGAGCTCTTCGACCGTATCATCGCCAAGGGCCACTACTCCGAACGCGCCGCCGCCGGCCT
JMFF014L14+ CGAGCTCTTCGACCGTATCATCGCCAAGGGCCACTACTCCGAACGCGCCGCCGCCGGCCT
JMFF015C21+ CGAGCTCTTCGACCGTATCATCGCCAAGGGCCACTACTCCGAACGCGCCGCCGCCGGCCT
____________________________________________________________
consensus CGAGCTCTTCGACCGTATCATCGCCAAGGGCCACTACTCCGAACGCGCCGCCGCCGGCCT

. : . : . : . : . : . :
JMSF028G05+ CTGCCGTCAGATGGTTACCGTTCTTCACTACTGTCACTCTATGGGGGTTATGCACCGGGA
JMFF021B11+ CTGCCG
JMFF016P06+ CTGCCGTCAG
JMFF014L14+ CTGCCGTCAG
JMFF015C21+ CTGCCGTCAGATGGTTACCGTTCTTCACTACTGTCACTCTATGGGGGTTATGCACCGGGA
____________________________________________________________
consensus CTGCCGTCAGATGGTTACCGTTCTTCACTACTGTCACTCTATGGGGGTTATGCACCGGGA

. : . : . : . : . : . :
JMSF028G05+ TTTGAAGCCTGAGAATTTCTTGTTCTTGAGCTCCGATG
JMFF015C21+ TTTGAAGCCTGANAATTTCTTGTTCTTGAGCTCCG
____________________________________________________________
consensus TTTGAAGCCTGAGAATTTCTTGTTCTTGAGCTCCGATG