Alignment Contig 7679

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFS119H12+ CGCTGTTATCCCGGTTTTTTTAGTTTTGTTTGTCATTTACGAAAGATAAAACCGGTCAAC
JMFF005G13+ GTTATCCCGGTTTTTTTAGTTTTGTTTGTCATTTACGAAAGATAAAACCGGTCAAC
JMFF049N10+ ACGAAAGATAAAACCGGTCAAC
JMFS014C08+ TCAAC
JMFF008I06+ ACGAAAGATAAAACCGGTCAAC
____________________________________________________________
consensus CGCTGTTATCCCGGTTTTTTTAGTTTTGTTTGTCATTTACGAAAGATAAAACCGGTCAAC

. : . : . : . : . : . :
JMFS119H12+ GTGTCGACGAAATAAAAAGGCGACAACGAAGCAGCACGGCAGCGTTGCCTTCCGGCGATC
JMFF005G13+ GTGTCGACGAAATAAAAAGGCGACAACGAAGCAGCACGGCAGCGTTGCCTTCCGGCGATC
JMFF049N10+ GTGTCGACGAAATAAAAAGGCGACAACGAAGCAGCACGGCAGCGTTGCCTTCCGGCGATC
JMSF014O18+ AGCGTTGCCTTCCGGCGATC
JMFS014C08+ GTGTCGACGAAATAAAAAGGCGACAACGAAGCAGCACGGCAGCGTTGCCTTCCGGCGATC
JMFF008I06+ GTGTCGACGAAATAAAAAGGCGACAACGAAGCAGCACGGCAGCGTTGCCTTCCGGCGATC
JMSF025N04+ GGCGACAACGAAGCAGCACGGCAGCGTTGCCTTCCGGCGATC
JMFS140G07+ CACGGCAGCGTTGCCTTCCGGCGATC
JMSF050L20+ CTTCCGGCGATC
JMSF050M20+ CTTCCGGCGATC
____________________________________________________________
consensus GTGTCGACGAAATAAAAAGGCGACAACGAAGCAGCACGGCAGCGTTGCCTTCCGGCGATC

. : . : . : . : . : . :
JMFS119H12+ TCCAATTCGAAGACCTTCAATTTCCTAAGCGCGCGGCGTCATGGCGGGGGAATTCGCCGC
JMFF005G13+ TCCAATTCGAAGACCTTCAATTTCCTAAGCGCGCGGCGTCATGGCGGGGGAATTCGCCGC
JMFF049N10+ TCCAATTCGAAGACCTTCAATTTCCTAAGCGCGCGGCGTCATGGCGGGGGAATTCGCCGC
JMSF014O18+ TCCAATTCGAAGACCTTCAATTTCCTAAGCGCGCGGCGTCATGGCGGGGGAATTCGCCGC
JMFS014C08+ TCCAATTCGAAGACCTTCAATTTCCTAAGCGCGCGGCGTCATGGCGGGGGAATTCGCCGC
JMFF008I06+ TCCAATTCGAAGACCTTCAATTTCCTAAGCGCGCGGCGTCATGGCGGGGGAATTCGCCGC
JMSF025N04+ TCCAATTCGAAGACCTTCAATTTCCTAAGCGCGCGGCGTCATGGCGGGGGAATTCGCCGC
JMFS140G07+ TCCAATTCGAAGACCTTCAATTTCCTAAGCGCGCGGCGTCATGGCGGGGGAATTCGCCGC
JMSF050L20+ TCCAATTCGAAGACCTTCAATTTCCTAAGCGCGCGGNGTCATGGCGGGGGAATTCGCCGC
JMSF050M20+ TCCAATTCGAAGACCTTCAATTTCCTAAGCGCGCGGCGTCATGGCGGGGGAATTCGCCGC
____________________________________________________________
consensus TCCAATTCGAAGACCTTCAATTTCCTAAGCGCGCGGCGTCATGGCGGGGGAATTCGCCGC

. : . : . : . : . : . :
JMFS119H12+ CGCCGTGGAGGACGGGCTGCGGCTTTCGAAGCGGATAAACTTCGGGAAGGACAGGGCAGT
JMFF005G13+ CGCCGTGGAGGACGGGCTGCGGCTTTCGAAGCGGATAAACTTCGGGAAGGACAGGGCAGT
JMFF049N10+ CGCCGTGGAGGACGGGCTGCGGCTTTCGAAGCGGATAAACTTCGGGAAGGACAGGGCAGT
JMSF014O18+ CGCCGTGGAGGACGGGCTGCGGCTTTCGAGGCGGATAAACTTCGGGAAGGACAGGGCAGT
JMFS014C08+ CGCCGTGGAGGACGGGCTGCGGCTTTCGAAGCGGATAAACTTCGGGAAGGACAGGGCAGT
JMFF008I06+ CGCCGTGGAGGACGGGCTGCGGCTTTCGAAGCGGATAAACTTCGGGAAGGACAGGGCAGT
JMSF025N04+ CGCCGTGGAGGACGGGCTGCGGCTTTCGAAGCGGATAAACTTCGGGAAGGACAGGGCAGT
JMFF037D20+ CGTGGAGGACGGGCTGCGGCTTTCGAAGCGGATAAACTTCGGGAAGGACAGGGCAGT
JMFS140G07+ CGCCGTGGAGGACGGGCTGCGGCTTTCGAAGCGGATAAACTTCGGGAAGGACAGGGCAGT
JMSF050L20+ CGCCGTGGAGGACGGGCTGCGGCTTTCGAAGCGGATAAACTTCGGGAAGGACAGGGCAGT
JMSF050M20+ CGCCGTGGAGGACGGGCTGCGGCTTTCGAAGCGGATAAACTTCGGGAAGGACAGGGCAGT
____________________________________________________________
consensus CGCCGTGGAGGACGGGCTGCGGCTTTCGAAGCGGATAAACTTCGGGAAGGACAGGGCAGT

. : . : . : . : . : . :
JMFS119H12+ GGCGCCGCCGAGAGCGATGACGGCCATGGAGAAGACGGCTCACTCCTACCTTCCATCAGC
JMFF005G13+ GGCGCCGCCGAGAGCGATGACGGCCATGGAGAAGACGGCTCACTCCTACCTTCCATCAGC
JMFF049N10+ GGCGCCGCCGAGAGCGATGACGGCCATGGAGAAGACGGCTCACTCCTACCTTCCATCAGC
JMSF014O18+ GGCGCCGCCGAGAGCGATGACGGCCATGGAGAAGACGGCTCACTCCTACCTTCCATCAGC
JMFS014C08+ GGCGCCGCCGAGAGCGATGACGGCCATGGAGAAGACGGCTCACTCCTACCTTCCATCAGC
JMFF008I06+ GGCGCCGCCGAGAGCGATGACGGCCATGGAGAAGACGGCTCACTCCTACCTTCCATCAGC
JMSF025N04+ GGCGCCGCCGAGAGCGATGACGGCCATGGAGAANACGGCTCACTCCTACCTTCCATCAGC
JMFF037D20+ GGCGCCGCCGAGAGCGATGACGGCCATGGAGAAGACGGCTCACTCCTACCTTCCATCAGC
JMFS140G07+ GGCGCCGCCGAGAGCGACGACGGCCATGGAGAAGACGGCTCACTCCTACCTTCCATCAGC
JMSF050L20+ GGCGCCGCCNAGAGCGATGACGGCCATGGAGA-GACGGCTCACTCCTACCTTCCATCAGC
JMSF050M20+ GGCGCCGCCGAGAGCGATGACGGCCATGGAGA-GACGGCTCACTCCTACCTTCCATCAGC
____________________________________________________________
consensus GGCGCCGCCGAGAGCGATGACGGCCATGGAGAAGACGGCTCACTCCTACCTTCCATCAGC

. : . : . : . : . : . :
JMFS119H12+ TCCAATGCTCTACGCCGTTATTGAGAACCCCGCCGTGGTGGACAACCCGGACGTTCCGAG
JMFF005G13+ TCCAATGCTCTACGCCGTTATTGAGAACCCCGCCGTGGTGGACAACCCGGACGTTCCGAG
JMFF049N10+ TCCAATGCTCTACGCCGTTATTGAGAACCCCGCCGTGGTGGACAACCCGGACGTTCCGAG
JMSF014O18+ TCCAATGCTCTACGCCGTTATTGAGAACCCCGCCGTGGTGGACAACCCGGACGTTCCGAG
JMFS014C08+ TCCAATGCTCTACGCCGTTATTGAGAACCCCGCCGTGGTGGACAACCCGGACGTTCCGAG
JMFF008I06+ TCCAATGCTCTACGCCGTTATTGAGAACCCCGCCGTGGTGGACAACCCGGACGTTCCGAG
JMSF025N04+ TCCAATGCTCTACGCCGTTATTGAGAACCCCGCCGTGGTGGACAACCCGGACGTTCCGAG
JMFF037D20+ TCCAATGCTCTACGCCGTTATTGAGAACCCCGCCGTGGTGGACAACCCGGACGTTCCGAG
JMFS140G07+ TCCAATGCTCTACGCCGTTATTGAGAACCCCGCCGTGGTGGACAACCCGGACGTTCCGAG
JMSF050L20+ TCCAATGCTCTACGCCGTTATTGAGAACCCCGCCGTGGTGGACAACCCGGACGTTCCGAG
JMSF050M20+ TCCAATGCTCTACGCCGTTATTGAGAACCCCGCCGTGGTGGACAACCCGGACGTTCCGAG
____________________________________________________________
consensus TCCAATGCTCTACGCCGTTATTGAGAACCCCGCCGTGGTGGACAACCCGGACGTTCCGAG

. : . : . : . : . : . :
JMFS119H12+ CTACCAGCCTCACGTGCACGGCAGATGCGACCCTCCCGCGCTGATTCCTCTGCAGATGAA
JMFF005G13+ CTACCAGCCTCACGTGCACGGCAGATGCGACCCTCCCGCGCTGATTCCTCTGCAGATGAA
JMFF049N10+ CTACCAGCCTCACGTGCACGGCAGATGCGACCCTCCCGCGCTGATTCCTCTGCAGATGAA
JMSF014O18+ CTACCAGCCTCACGTGC
JMFS014C08+ CTACCAGCCTCACGTGCACGGCAGATGCGACCCTCCCGCGCTGATTCCTCTGCAGATGAA
JMFF008I06+ CTACCAGCCTCACGTGCACGGCAGATGCGACCCTCCCGCGCTGATTCCTCTGCAGATGAA
JMSF025N04+ CTACCAGCCTCACGTGCACGGCAGATGCGACCCTCCCGCGCT-ATTCCTCTGCAGATGAA
JMFF037D20+ CTACCAGCCTCACGTGCACGGCAGATGCGACCCTCCCGCGCTGATTCCTCTGCAGATGAA
JMFS140G07+ CTACCAGCCTCACGTGCACGGCAGATGCGACCCTCCCGCGCTGATTCCTCTGCAGATGAA
JMSF050L20+ CTACCAGCCTCACGTGCACGGNAGATGCGACCCTCCCNCGCTGATTCCTCTGCAGATGAA
JMSF050M20+ CTACCAGCCTCACGTGCACGGCAGATGCGACCCTCCCGCGCTGATTCCTCTGCAGATGAA
____________________________________________________________
consensus CTACCAGCCTCACGTGCACGGCAGATGCGACCCTCCCGCGCTGATTCCTCTGCAGATGAA

. : . : . : . : . : . :
JMFS119H12+ CAGCATTTCTGTCGCCGCCGAGTGTTATCTGGACACGGCGTTCGTCACCGTCACCGGATC
JMFF005G13+ CAGCATTTCTGTCGCCGCCGAGTGTTATCTGGACACGGCGTTCGTCACCGTCACCGGATC
JMFF049N10+ CAGCATTTCTGTCGCCGCCGAGTGTTATCTGGACACGGCGTTCGTCACCGTCACCGGATC
JMFS014C08+ CAGCATTTCTGTCGCCGCCGAGTGTTATCTGGACACGGCGTTCGTCACCGTCACCGGATC
JMFF008I06+ CAGCATTTCTGTCGCCGCCGAGTGTTATCTGGACACGGCGTTCGTCACCGTCACCGGATC
JMSF025N04+ CAGCATTTCTGTCGCCGCCGAGTGTTATCTGGACACGGCGTTCGTCACCGTCACCGGATC
JMFF037D20+ CAGCATTTCTGTCGCCGCCGAGTGTTATCTGGACACGGCGTTCGTCACCGTCACCGGATC
JMFS140G07+ CAGCATTTCTGTCGCCGCCGAGTGTTATCTGGACACGGCGTTCGTCACCGTCACCGGATC
JMSF050L20+ CAGCATTTCTGTCGCCGCCGAGTGTTATCTGGACACGGCGTTCGTCACCGTCACCGGATC
JMSF050M20+ CAGCATTTCTGTCGCCGCCGAGTGTTATCTGGACACGGCGTTCGTCACCGTCACCGGATC
____________________________________________________________
consensus CAGCATTTCTGTCGCCGCCGAGTGTTATCTGGACACGGCGTTCGTCACCGTCACCGGATC

. : . : . : . : . : . :
JMFS119H12+ CTGGCGCGTGCACTGCGTCATGGGCAGCCGCAGCTGCGATTGTCGTATTGCCATTCCGAT
JMFF005G13+ CTGGCGCGTGCACTGCGTCATGGGCAGCCGCAGCTGCGATTGT
JMFF049N10+ CTGGCGCGTGCACTGCGTCATGGGCAGCCGCAGCTGCGATTGTCGTATTGCCATTCCGAT
JMFS014C08+ CTGGCGCGTGCACTGCGTCATGGGCAGCCGCAGCTGCGATTGTCGTATTGCCATTCCGAT
JMFF008I06+ CTGGCGCGTGCACTGCGTCATGGGCAGCCGCAGCTGCGATTGTCGTATTGCCATTCCGAT
JMSF025N04+ CTGGCGCGTGCACTGCGTCATGGGCAGCCGCAGCTGCGATTGTCGTATTGCCATTCCGAT
JMFF037D20+ CTGGCGCGTGCACTGCGTCATGGGCAGCCGCAGCTGCGATTGTCGTATTGCCATTCCGAT
JMFS140G07+ CTGGCGCGTGCACTGCGTCATGGGCAGCCGCAGCTGCGATTGTCGTATTGCCATTCCGAT
JMSF050L20+ CTGGCGCGTGCACTGCGTCATGGGCAGCCGCAGCTGCGATTGTCGTATTGCCATTCCGAT
JMSF050M20+ CTGGCGCGTGCACTGCGTCATGGGCAGCCGCAGCTGCGATTGTCGTATTGCCATTCCGAT
____________________________________________________________
consensus CTGGCGCGTGCACTGCGTCATGGGCAGCCGCAGCTGCGATTGTCGTATTGCCATTCCGAT

. : . : . : . : . : . :
JMFS119H12+ GGGCGAACAGGGTTCGATTCTAGGTCTCGAGGTTGAGGTGCCCGGGAAACATTACCATAC
JMFF049N10+ GGGCGAACAGGGTTCGATTCTAGGTCTCGAGGTTGAGGTGCCCGGGAAACATTACCATAC
JMFS014C08+ GGGCGAACAGGGTTCGATTCTAGGTCTCGAGGTTGAGGTGCCC
JMFF008I06+ GGGCGAACAGGGTTCGATTCTAGGTCTCGAGGTTGAGGTGCCCGGGAAACATTACCATAC
JMSF025N04+ GGGCGAACAGGGTTCGATTCTAGGTCTCGAGGTTGAGGTGCCCGGGAAACATTACCATAC
JMFF037D20+ GGGCGAACAGGGTTCGATTCTAGGTCTCGAGGTTGAGGTGCCCGGGAAACATTACCATAC
JMFS140G07+ GGGCGAACAGGGTTCGATTCTAGGTCTCGAGGTTGAGGTGCCCGGGAAACATTACCATAC
JMSF050L20+ GGGCGAACAGGGTTCGATTCTAGGTCTCGAGGTTGAGGTGCCCGGGAAACATTACCATAC
JMSF050M20+ GGGCGAACAGGGTTCGATTCTAGGTCTCGAGGTTGAGGTGCCCGGGAAACATTACCATAC
____________________________________________________________
consensus GGGCGAACAGGGTTCGATTCTAGGTCTCGAGGTTGAGGTGCCCGGGAAACATTACCATAC

. : . : . : . : . : . :
JMFS119H12+ TGAACTAGTTGCTGTAGATGAT
JMFF049N10+ TGAACTAGTTGCTGTAGATGATAAAAAGGAAACAGCCAAATTTGAGGATGGATACTATTT
JMFF008I06+ TGAACTAGT
JMSF025N04+ TGAACTAGTTGCTGTAGATGATAAAAAGGAAACAGCCAAATTTGAGGATGGATACTATTT
JMFF037D20+ TGAACTAGTTGCTGTAGATGATAAAAAGGAAACAGCCAAATTTGAGGATGGATACTATTT
JMFS140G07+ TGAACTAGTTGCTGTAGATGATAAAAAGGAAACAGCCAAATTTGAGGATGGATACTATTT
JMSF050L20+ TGAACTAGTTGCTGTAGATGATAAAAAGGAAACAGCCAAATTTGAGGATGGATACTATTT
JMSF050M20+ TGAACTAGTTGCTGTAGATGATAAAAAGGAAACAGCCAAATTTGAGGATGGATACTATTT
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consensus TGAACTAGTTGCTGTAGATGATAAAAAGGAAACAGCCAAATTTGAGGATGGATACTATTT

. : . : . : . : . : . :
JMFF049N10+ GAATCCCA
JMSF025N04+ GAATCCCAACATTTTTACCCTCGAAATACCAGAG
JMFF037D20+ GAATCCCAACATTTTTACCCTCG
JMFS140G07+ GAATCCCA-CATTTTTACCCTCGAAATACCAGAGATTGATGGGGGTA
JMSF050L20+ GAATCCCAACATTTTTACCCTCGAAATACCAGAGATTGATGGGGGTACCAATCTTTTAGT
JMSF050M20+ GAATCCCAACATTTTTACCCTCGAAATACCAGAGATTGATGGGGGTACCAATCTTTTAGT
____________________________________________________________
consensus GAATCCCAACATTTTTACCCTCGAAATACCAGAGATTGATGGGGGTACCAATCTTTTAGT

. : . : . : . : . : . :
JMSF050L20+ CACTATTAGATGGTCTCAGAAGTTACTGTACCATGATGGNCAGTTTACCCTGAACATCCN
JMSF050M20+ CACTATTAGATGGTCTCAGAAGTTACTGTACCATGATGGGCAGTTTACCCTGAACATCCC
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consensus CACTATTAGATGGTCTCAGAAGTTACTGTACCATGATGGGCAGTTTACCCTGAACATCCC

. : . : . : . : . : . :
JMSF050L20+ GTTC
JMSF050M20+ GTTCAGTTTCCCGGA
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consensus GTTCAGTTTCCCGGA