Alignment Contig 7420

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFF033B22+ GTAACTTCCATTTCTCTGAACCTTCTTTCGTGTGTGTACTTTTCTCTCTCTATCCTCTGA
JMSF003B06+ CTGAACCTTCTTTCGTGTGTGTACTTTTCTCTCTCTATCCTCTGA
JMFF050M14+ GTAACTTCCATTTCTCTGAACCTTCTTTCGTGTGTGTACTTTTCTCTCTCTATCCTCTGA
JMSF020I03+ GAACCTTCTTTCGTGTGTGTACTTTTCTCTCTCTATCCTCTGA
JMFS163B07+ TTTCGTGTGTGTACTTTTCTCTCTCTATCCTCTGA
JMFS017F01+ GAACCTTCTTTCGTGTGTGTACTTTTCTCTCTCTATCCTCTGA
JMFS153A11+ TTCTTTCGTGTGTGTACTTTTCTCTCTCTATCCTCTGA
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consensus GTAACTTCCATTTCTCTGAACCTTCTTTCGTGTGTGTACTTTTCTCTCTCTATCCTCTGA

. : . : . : . : . : . :
JMFF033B22+ AGTCTAGAGAGTCAATTATTCTCAAGGAGAGAAGAGTTGAACAGACTGTTGGAAGAGAGA
JMSF003B06+ AGTCTAGAGAGTCAATTATTCTCAAGGAGAGAAGAGTTGAACAGACTGTTGGAAGAGAGA
JMFF050M14+ AGTCTAGAGAGTCAATTATTCTCAAGGAGAGAAGAGTTGAACAGACTGTTGGAAGAGAGA
JMSF020I03+ AGTCTAGAGAGTCAATTATTCTCAAGGAGAGAAGAGTTGAACAGACTGTTGGAAGAGAGA
JMFS163B07+ AGTCTAGAGAGTCAATTATTCTCAAGGAGAGAAGAGTTGAACAGACTGTTGGAAGAGAGA
JMFS017F01+ AGTCTAGAGAGTCAATTATTCTCAAGGAGAGAAGAGTTGAACAGACTGTTGGAAGAGAGA
JMFS153A11+ AGTCTAGAGAGTCAATTATTCTCAAGGAGAGAAGAGTTGAACAGACTGTTGGAAGAGAGA
JMSF028P15+ GTTGGAAGAGAGA
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consensus AGTCTAGAGAGTCAATTATTCTCAAGGAGAGAAGAGTTGAACAGACTGTTGGAAGAGAGA

. : . : . : . : . : . :
JMFF033B22+ AAAAACCCAGAAACCTCTGAGGCACTGAATTTGCAGGTTTGGTTGTTGAATCCCAAATTC
JMSF003B06+ AAAAACCCAGAAACCTCTGAGGCACTGAATTTGCAGGTTTGGTTGTTGAATCCCAAATTC
JMFF050M14+ AAAAACCCAGAAACCTCTGAGGCACTGAATTTGCAGGTTTGGTTGTTGAATCCCAAATTC
JMSF020I03+ AAAAACCCAGAAACCTCTGAGGCACTGAATTTGCAGGTTTGGTTGTTGAATCCCAAATTC
JMFS163B07+ AAAAACCCAGAAACCTCTGAGGCACTGAATTTGCAGGTTTGGTTGTTGAATCCCAAATTC
JMFS017F01+ AAAAACCCAGAAACCTCTGAGGCACTGAATTTGCAGGTTTGGTTGTTGAATCCCAAATTC
JMFS153A11+ AAAAACCCAGAAACCTCTGAGGCACTGAATTTGCAGGTTTGGTTGTTGAATCCCAAATTC
JMSF028P15+ AAAAACCCAGAAACCTCTGAGGCACTGAATTTGCAGGTTTGGTTGTTGAATCCCAAATTC
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consensus AAAAACCCAGAAACCTCTGAGGCACTGAATTTGCAGGTTTGGTTGTTGAATCCCAAATTC

. : . : . : . : . : . :
JMFF033B22+ CCAATTGTGTTCTTGGATTTAGAGGCTGCTG-GGATTGAAGATGATGATGTTTGATGATA
JMSF003B06+ CCAATTGTGTTCTTGGATTTAGAGGCTGCTG-GGATTGAAGATGATGATGTTTGATGATA
JMFF050M14+ CCAATTGTGTTCTTGGATTTAGAGGTGGCTGNGGATTGAAGATGATGATGTTTGATGATA
JMSF020I03+ CCAATTGTGTTCTTGGATTTAGAGGCTGCTG-GGATTGAAGATGATGATGTTTGATGATA
JMFS163B07+ CCAATTGTGTTCTTGGATTTAGAGGCTGCTG-GGATTGAAGATGATGATGTTTGATGATA
JMFS017F01+ CCAATTGTGTTCTTGGATTTAGAGGCTGCTG-GGATTGAAGATGATGATGTTTGATGATA
JMFS153A11+ CCAATTGTGTTCTTGGATTTAGAGGCTGCTG-GGATTGAAGATGATGATGTTTGATGATA
JMSF028P15+ CCAATTGTGTTCTTGGATTTAGAGGCTGCTG-GGATTGAAGATGATGATGTTTGATGATA
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consensus CCAATTGTGTTCTTGGATTTAGAGGCTGCTG-GGATTGAAGATGATGATGTTTGATGATA

. : . : . : . : . : . :
JMFF033B22+ TGGGGTTCTGTAATGATCTTGATTCCTTCCTGGCTCCTCTGAAAGAGCCAGCTGATATGG
JMSF003B06+ TGGGGTTCTGTAATGATCTTGATTCCTTCCTGGCTC
JMFF050M14+ TGGGGTTCTGTAATGATCTTGATTCCTTCCTGGCTCCTCTGAAAGAGCCAGCTGATATGG
JMSF020I03+ TGGGGTTCTGTAATGATCTTGATTCCTTCCTGGCTCCTCTGAAAGAGCCAGCTGATATGG
JMFS163B07+ TGGGGTTCTGTAATGATCTTGATTCCTTCCTGGCTCCTCTGAAAGAGCCAGCTGATATGG
JMFS017F01+ TGGGGTTCTGTAATGATCTTGATTCCTTCCTGGCTCCTCTGAAAGAGCCAGCTGATATGG
JMFS153A11+ TGGGGTTCTGTAATGATCTTGATTCCTTCCTGGCTCCTCTGAAAGAGCCAGCTGATATGG
JMSF028P15+ TGGGGTTCTGTAATGATCTTGATTCCTTCCTGGCTCCTCTGAAAGAGCCAGCTGATATGG
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consensus TGGGGTTCTGTAATGATCTTGATTCCTTCCTGGCTCCTCTGAAAGAGCCAGCTGATATGG

. : . : . : . : . : . :
JMFF033B22+ TTGCTCCACCGCCCGGGGCTGAGCCCGAGGCGGCGGTGGTGGTGGAGGTGGAGGATGACT
JMFF050M14+ TTGCTCCACCGCCCGGGGCTGAGCCCGAGGCGGCGGTGGTGGTGGAGGTGGAGGATGACT
JMSF020I03+ TTGCTCCACCGCCCGGGGCTGAGCCCGAGGCGGCGGTGGTGGTGGAGGTGGAGGATGACT
JMFS163B07+ TTGCTCCACCGCCCGGGGCTGAGCCCGAGGCGGCGGTGGTGGTGGAGGTGGAGGATGACT
JMFS017F01+ TTGCTCCACCGCCCGGGGCTGAGCCCGAGGCGGCGGTGGTGGTGGAGGTGGAGGATGACT
JMFS153A11+ TTGCTCCACCGCCCGGGGCTGAGCCCGAGGCGGCGGTGGTGGTGGAGGTGGAGGATGACT
JMSF028P15+ TTGCTCCACCGCCCGGGGCTGAGCCCGAGGCGGCGGTGGTGGTGGAGGTGGAGGATGACT
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consensus TTGCTCCACCGCCCGGGGCTGAGCCCGAGGCGGCGGTGGTGGTGGAGGTGGAGGATGACT

. : . : . : . : . : . :
JMFF033B22+ ATAGCGACGATGAAATGGATATGGAGGAGCTGGAGAGGAGGATGTGGAGGGACAANATGA
JMFF050M14+ ATAGCGACGATGAAATGGATATGGAGGAGCTGGAGAGGAGGATGTGGAGGGACAAGATGA
JMSF020I03+ ATAGCGACGATGAAATGGATATGGAGGAGCTGGAGAGGAGGATGTGGAGGGACAAGATGA
JMFS163B07+ ATAGCGACGATGAAATGGATATGGAGGAGCTGGAGAGGAGGATGTGGAGGGACAAGATGA
JMFS017F01+ ATAGCGACGATGAAATGGATATGGAGGAGCTGGAGAGGAGGATGTGGAGGGACAAGATGA
JMFS153A11+ ATAGCGACGATGAAATGGATATGGAGGAGCTGGAGAGGAGGATGTGGAGGGACAAGATGA
JMSF028P15+ ATAGCGACGATGAAATGGATATGGAGGAGCTGGAGAGGAGGATGTGGAGGGACAAGATGA
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consensus ATAGCGACGATGAAATGGATATGGAGGAGCTGGAGAGGAGGATGTGGAGGGACAAGATGA

. : . : . : . : . : . :
JMFF033B22+ ANCTGAAACGTTTGAAG
JMFF050M14+ AGCTGAAACGTTTGAAGGAGATGAGCAAGAGTAAGGAGGGCGAGGGCGAGGATGGGGCTA
JMSF020I03+ AGCTGAAACGTTTGAAGGAGATGAGCAAGAGTAAGGAGGGCGAGGGCGAGGATGGGGCTA
JMFS163B07+ AGCTGAAACGTTTGAAGGAGATGAGCAAGAGTAAGGAGGGCGAGGGCGAGGATGGGGCTA
JMFS017F01+ AGCTGAAACGTTTGAAGGAGATGAGCAAGAGTAAGGAGGGCGAGGGCGAGGATGGGGCTA
JMFS153A11+ AGCTGAAACGTTTGAAGGAGATGAGCAAGAGTAAGGAGGGCGAGGGCGAGGATGGGGCTA
JMSF028P15+ AGCTGAAACGTTTGAAGGAGATGAGCAAGAGTAAGGAGGGCGAGGGCGAGGATGGGGCTA
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consensus AGCTGAAACGTTTGAAGGAGATGAGCAAGAGTAAGGAGGGCGAGGGCGAGGATGGGGCTA

. : . : . : . : . : . :
JMFF050M14+ AACGGGAGACGAACAAGTCTCAGGAGCAGGCGAGGAGGAAGAAGATGTCGAGGGCTCAGG
JMSF020I03+ AACGGGAGACGAACAAGTCTCAGGAGCAGGCGAGGAGGAAGAAGATGTCGAGGGCTCAGG
JMFS163B07+ AACGGGAGACGAACAAGTCTCAGGAGCAGGCGAGGAGGAAGAAGATGTCGAGGGCTCAGG
JMFS017F01+ AACGGGAGACGAACAAGTCTCAGGAGCAGGCGAGGAGGAAGAAGATGTCGAGGGCTCAGG
JMFS153A11+ AACGGGAGACGAACAAGTCTCAGGAGCAGGCGAGGAGGAAGAAGATGTCGAGGGCTCAGG
JMSF028P15+ AACGGGATACGAACAAGTCTCAGGAGCAGGCGAGGAGGAAGAAGATGTCGAGGGCTCAGG
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consensus AACGGGAGACGAACAAGTCTCAGGAGCAGGCGAGGAGGAAGAAGATGTCGAGGGCTCAGG

. : . : . : . : . : . :
JMFF050M14+ ACGGGATCTT
JMSF020I03+ ACGGGATCTTGAAGTACATGTTGAAGATGATGGAGGTGTGCAAGGCTCAGGGGTTCGTTT
JMFS163B07+ ACGGGATCTTGAAGTACATGTTGAAGATGATGGAGGTGTGCAAGGCTCAGGGGTTCGNTT
JMFS017F01+ ACGGGATCTTGAAGTACATGTTGAAGATGATGGAGGTGTGCAAGGCTCANGGGTTCGTTT
JMFS153A11+ ACGGGATCTTGAAGTACATGTTGAAGATGATGGAGGTGTGCAAGGCTCAGGGGTTCGTTT
JMSF028P15+ ACGGGATCTTGAAGTACATGTTGAAGATGATGGAGGTGTGCAAGGCTCANGGGTTCGTTT
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consensus ACGGGATCTTGAAGTACATGTTGAAGATGATGGAGGTGTGCAAGGCTCAGGGGTTCGTTT

. : . : . : . : . : . :
JMSF020I03+ ACGGGATCATCCCGGAGAAAGGGAAGCCGGTGAGCGGGGCGTCTGATAATTTGAGGGAGT
JMFS163B07+ ACGGGATCAT
JMFS017F01+ ACGGGATCA
JMFS153A11+ ACGGGATCATCCCGNAGAAAGGGAAGCCCGTGAGCGGGGCG
JMSF028P15+ ACGGGATCATCCCGGAGAAAGGGAAGCCGGTGAGCGGGGCGTCTGATAATTTGAGGGAGT
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consensus ACGGGATCATCCCGGAGAAAGGGAAGCCGGTGAGCGGGGCGTCTGATAATTTGAGGGAGT

. : . : . : . : . : . :
JMSF020I03+ GGTGGAA
JMSF028P15+ GGTGGAAGGATAAGGTGAGGTTTGATCNNAATGGCCCGGCTG
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consensus GGTGGAAGGATAAGGTGAGGTTTGATCNNAATGGCCCGGCTG