Alignment Contig 736

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF022A21+ GACACCTCCTTTCTCTCAACATAATCTTTTTCTCCCTTCTTTCATTTCTAGGGTTTCCTC
JMFF030L01+ AATCTTTTTCTCCCTTCTTTCATTTCTAGGGTTTCCTC
JMFF022I09+ AATCTTTTTCTCCCTTCTTTCATTTCTAGGGTTTCCTC
JMFF017J04+ AATCTTTTTCTCCCTTCTTTCATTTCTAGGGTTTCCTC
JMFF019G08+ CATTTCTAGGGTTTCCTC
JMSF053G03+ GACACCTCCTTTCTCTCAACATAATCTTTTTCTCCCTTCTTTCATTTCTAGGGTTTCCTC
JMFS042C05+ TAGGGTTTCCTC
JMFF051B04+ TCCTC
JMFS077F08+ CTC
____________________________________________________________
consensus GACACCTCCTTTCTCTCAACATAATCTTTTTCTCCCTTCTTTCATTTCTAGGGTTTCCTC

. : . : . : . : . : . :
JMSF022A21+ TTTCTCTCTCTAAAACTCCGAAAATGGGTTCGATCGCCGATCCCGGCGAGGTGACTCAGG
JMFF030L01+ TTTCTCTCTCTAAAACTCCGAAAATGGGTTCGATCGCCGATCCCGGCGAGGTGACTCAGG
JMFF022I09+ TTTCTCTCTCTAAAACTCCGAAAATGGGTTCGATCGCCGATCCCGGCGAGGTGACTCAGG
JMFF017J04+ TTTCTCTCTCTAAAACTCCGAAAATGGGTTCGATCGCCGATCCCGGCGAGGTGACTCAGG
JMFF019G08+ TTTCTCTCTCTAAAACTCCGAAAATGGGTTCGATCGCCGATCCCGGCGAGGTGACTCAGG
JMSF053G03+ TTTCTCTCTCTAAAACTCCGAAAATGGGTTCGATCGCCGATCCCGGCGAGGTGACTCAGG
JMFS042C05+ TTTCTCTCTCTAAAACTCCGAAAATGGGTTCGATCGCCGATCCCGGCGAGGTGACTCAGG
JMFF051B04+ TTTCTCTCTCTAAAACTCCGAAAATGGGTTCGATCGCCGATCCCGGCGAGGTGACTCAGG
JMFS077F08+ TTTCTCTCTCTAAAACTCCGAAAATGGGTTCGATCGCCGATCCCGGCGAGGTGACTCAGG
____________________________________________________________
consensus TTTCTCTCTCTAAAACTCCGAAAATGGGTTCGATCGCCGATCCCGGCGAGGTGACTCAGG

. : . : . : . : . : . :
JMSF022A21+ CGTCGGCGCCGCCGGCGCCGCCGCCGACGAGCTTCGACGAGTTCCAGCGCCAGACTTCTC
JMFF030L01+ CGTCGGCGCCGCCGGCGCCGCCGCCGACGAGCTTCGACGAGTTCCAGCGCCAGACTTCTC
JMFF022I09+ CGTCGGCGCCGCCGGCGCCGCCGCCGACGAGCTTCGACGAGTTCCAGCGCCAGACTTCTC
JMFF017J04+ CGTCGGCGCCGCCGGCGCCGCCGCCGACGAGCTTCGACGAGTTCCAGCGCCAGACTTCTC
JMFF019G08+ CGTCGGCGCCGCCGGCGCCGCCGCCGACGAGCTTCGACGAGTTCCAGCGCCAGACTTCTC
JMSF053G03+ CGTCGGCGCCGCCGGCGCCGCCGCCGACGAGCTTCGACGAGTTCCAGCGCCAGACTTCTC
JMFS042C05+ CGTCGGCGCCGCCGGCGCCGCCGCCGACGAGCTTCGACGAGTTCCAGCGCCAGACTTCTC
JMFF051B04+ CGTCGGCGCCGCCGGCGCCGCCGCCGACGAGCTTCGACGAGTTCCAGCGCCAGACTTCTC
JMFS077F08+ CGTCGGCGCCGCCGGCGCCGCCGCCGACGAGCTTCGACGAGTTCCAGCGCCAGACTTCTC
____________________________________________________________
consensus CGTCGGCGCCGCCGGCGCCGCCGCCGACGAGCTTCGACGAGTTCCAGCGCCAGACTTCTC

. : . : . : . : . : . :
JMSF022A21+ TGATGACCAGCTGCACTCTCCTCTGGAAGGAGCTTTCTGATCATTTCACTTCTCTGGAAC
JMFF030L01+ TGATGACCAGCTGCACTCTCCTCTGGAAGGAGCTTTCTGATCATTTCACTTCTCTGGAAC
JMFF022I09+ TGATGACCAGCTGCACTCTCCTCTGGAAGGAGCTTTCTGATCATTTCACTTCTCTGGAAC
JMFF017J04+ TGATGACCAGCTGCACTCTCCTCTGGAAGGAGCTTTCTGATCATTTCACTTCTCTGGAAC
JMFF019G08+ TGATGACCAGCTGCACTCTCCTCTGGAAGGAGCTTTCTGATCATTTCACTTCTCTGGAAC
JMSF053G03+ TGATGACCAGCTGCACTCTCCTCTGGAAGGAGCTTTCTGATCATTTCACTTCTCTGGAAC
JMFS042C05+ TGATGACCAGCTGCACTCTCCTCTGGAAGGAGCTTTCTGATCATTTCACTTCTCTGGAAC
JMFF051B04+ TGATGACCAGCTGCACTCTCCTCTGGAAGGAGCTTTCTGATCATTTCACTTCTCTGGAAC
JMFS077F08+ TGATGACCAGCTGCACTCTCCTCTGGAAGGAGCTTTCTGATCATTTCACTTCTCTGGAAC
____________________________________________________________
consensus TGATGACCAGCTGCACTCTCCTCTGGAAGGAGCTTTCTGATCATTTCACTTCTCTGGAAC

. : . : . : . : . : . :
JMSF022A21+ AGGATCTTTTGAGGAAGTCTGAAGCCCTCAAGGCCAAGCTGCAAACCCTAGACACCCAGA
JMFF030L01+ AGGATCTTTTGAGGAAGTCTGAAGCCCTCAAGGCCAAGCTGCAAACCCTAGACACCCAGA
JMFF022I09+ AGGATCTTTTGAGGAAGTCTGAAGCCCTCAAGGCCAAGCTGCAAACCCTAGACACCCAGA
JMFF017J04+ AGGATCTTTTGAGGAAGTCTGAAGCCCTCAAGGCCAAGCTGCAAACCCTAGACACCCAGA
JMFF019G08+ AGGATCTTTTGAGGAAGTCTGAAGCCCTCAAGGCCAAGCTGCAAACCCTAGACACCCAGA
JMSF053G03+ AGGATCTTTTGAGGAAGTCTGAAGCCCTCAAGGCCAAGCTGCAAACCCTAGACACCCAGA
JMFS042C05+ AGGATCTTTTGAGGAAGTCTGAAGCCCTCAAGGCCAAGCTGCAAACCCTAGACACCCAGA
JMFF051B04+ AGGATCTTTTGAGGAAGTCTGAAGCCCTCAAGGCCAAGCTGCAAACCCTAGACACCCAGA
JMFS077F08+ AGGATCTTTTGAGGAAGTCTGAAGCCCTCAAGGCCAAGCTGCAAACCCTAGACACCCAGA
____________________________________________________________
consensus AGGATCTTTTGAGGAAGTCTGAAGCCCTCAAGGCCAAGCTGCAAACCCTAGACACCCAGA

. : . : . : . : . : . :
JMSF022A21+ CCAAGCAGTCCCTTGAGGTGCTGGAGAAGCGCGAGACGTCTATTGCCGCCTCCATCTCCA
JMFF030L01+ CCAAGCAGTCCCTTGAGGTGCTGGAGAAGCGCGAGACGTCTATTGCCGCCTCCATCTCCA
JMFF022I09+ CCAAGCAGTCCCTTGAGGTGCTGGAGAAGCGCGAGACGTCTATTGCCGCCTCCATCTCCA
JMFF017J04+ CCAAGCAGTCCCTTGAGGTGCTGGAGAAGCGCGAGACGTCNNTTGCCGCCTCCATCTCCA
JMFF019G08+ CCAAGCAGTCCCTTGAGGTGCTGGAGAAGCGCGAGACGTCTATTGCCGCCTCCATCTCCA
JMSF053G03+ CCAAGCAGTCCCTTGAGGTGCTGGAGAAGCGCGAGACGTCTATTGCCGCCTCCATCTCCA
JMFS042C05+ CCAAGCAGTCCCTTGAGGTGCTGGAGAAGCGCGAGACGTCTATTGCCGCCTCCATCTCCA
JMFF051B04+ CCAAGCAGTCCCTTGAGGTGCTGGAGAAGCGCGAGACGTCTATTGCCGCCTCCATCTCCA
JMFS077F08+ CCAAGCAGTCCCTTGAGGTGCTGGAGAAGCGCGAGACGTCTATTGCCGCCTCCATCTCCA
____________________________________________________________
consensus CCAAGCAGTCCCTTGAGGTGCTGGAGAAGCGCGAGACGTCTATTGCCGCCTCCATCTCCA

. : . : . : . : . : . :
JMSF022A21+ TTACTCTCAAGAAAGTCGACGAGAGCAAGAGGGCTGCGCTCGTGGAATTCGGGAACGCCG
JMFF030L01+ TTACTCTCAAGAAAGTCGACGAGAGCAAGAGGGCTGCGCTCGTGGAATTCGGGAACGCCG
JMFF022I09+ TTACTCTCAAGAAAGTCGACGAGAGCAAGAGGGCTGCGCTCGTGGAATTCGGGAACGCCG
JMFF017J04+ TTACTCTCAAGAAAGTCGACGAGAGCAAGAGGGCTGCGCTCGTGGAATTCGGGAACGCCG
JMFF019G08+ TTACTCTCAAGAAAGTCGACGAGAGCAAGAGGGCTGCGCTCGTGGAATTCGGGAACGCCG
JMSF053G03+ TTACTCTCAAGAAAGTCGACGAGAGCAAGAGGGCTGCGCTCGTGGAATTCGGGAACGCCG
JMFS042C05+ TTACTCTCAAGAAAGTCGACGAGAGCAAGAGGGCTGCGCTCGTGGAATTCGGGAACGCCG
JMFF051B04+ TTACTCTCAAGAAAGTCGACGAGAGCAAGAGGGCTGCGCTCGTGGAATTCGGGAACGCCG
JMFS077F08+ TTACTCTCAAGAAAGTCGACGAGAGCAAGAGGGCTGCGCTCGTGGAATTCGGGAACGCCG
____________________________________________________________
consensus TTACTCTCAAGAAAGTCGACGAGAGCAAGAGGGCTGCGCTCGTGGAATTCGGGAACGCCG

. : . : . : . : . : . :
JMSF022A21+ GGGGTTCGGAGGAGCCGGAGGTTGATAATTCCGCGGGTTTGCTGTTAAAGCTGAGGTCTT
JMFF030L01+ GGGGTTCGGAGGAGCCGGAGGT
JMFF022I09+ GGGGTTCGGAGGAGCCGGAGGTTGATAATTCCGCGGGTTTGCTGTTAAAGCTGAGGTCTT
JMFF017J04+ GGGGTTCGGAGGAGCCGGAGGTTGATAATTCCGCGGGTTTGCTGTTAAAGCTGAGGTCTT
JMFF019G08+ GGGGTTCGGAGGAGCCGGAGGTTGATAATTCCGCGGGTTTGCTGTTAAAGCTGAGGTCTT
JMSF053G03+ GGGGTTCGGAGGAGCCGGAGGTTGATAATTCCGCGGGTTTGCTGTTAAAGCTGAGGTCTT
JMFS042C05+ GGGGTTCGGAGGAGCCGGAGGTTGATAATTCCGCGGGTTTGCTGTTAAAGCTGAGGTCTT
JMFF051B04+ GGGGTTCGGAGGAGCCGGAGGTTGATAATTCCGCGGGTTTGCTGTTAAAGCTGAGGTCTT
JMFS077F08+ GGGGTTCGGAGGAGCCGGAGGTTGATAATTCCGCGGGTTTGCTGTTAAAGCTGAGGTCTT
____________________________________________________________
consensus GGGGTTCGGAGGAGCCGGAGGTTGATAATTCCGCGGGTTTGCTGTTAAAGCTGAGGTCTT

. : . : . : . : . : . :
JMSF022A21+ TTTGTGTCCAGATGGATTCCAGAAGCTTCTGGAGCTTCGTGATTGTTCGGAAGAAGGAGC
JMFF022I09+ TTTGTGTCCA
JMFF017J04+ TTTGTGTCCAGATGGATTCCAGAAGCTTCTGGAGCTTCNTGATTGTTCGGAAGAAGGAGC
JMFF019G08+ TTTGTGTCCAGATGGATTCCAGAAGCTTCTGGAGCTTCGTGATTGTTCGGAAGAANGAGC
JMSF053G03+ TTTGTGTCCAGATGGATTCCAGAAGCTTCTGGAGCTTCGTGATTGTTCGGAAGAAGGAGC
JMFS042C05+ TTTGTGTCCAGATGGATTCCAGAAGCTTCTGGAGCTTCGTGATTGTTCGGAAGAAGGAGC
JMFF051B04+ TTTGTGTCCAGATGGATTCCAGAAGCTTCTGGAGCTTCGTGATTGTTCGGAAGAAGGAGC
JMFS077F08+ TTTGTGTCCAGATGGATTCCAGAAGCTTCTGGAGCTTCGTGATTGTTCGGAAGAAGGAGC
____________________________________________________________
consensus TTTGTGTCCAGATGGATTCCAGAAGCTTCTGGAGCTTCGTGATTGTTCGGAAGAAGGAGC

. : . : . : . : . : . :
JMSF022A21+ TGGAGTCTTTGAGGTCCGAAATCCGGAAAGCCCTAGGAGACTGTGTGGACCCCCCCAAGT
JMFF017J04+ TGGAGT
JMFF019G08+ TGGAGTCTTTGAGGTCCGAAATCCGGAAAGCC
JMSF053G03+ TGGAGTCTTTGAGGTCCGAAATCCGGAAAGCCCTAGGAGACTGTGTGGACCCCCCCAAGT
JMFS042C05+ TGGAGTCTTTGAGGTCCGAAATCCGGAAAGCCCTAGGAGACTGTGTGGACCCCCCCAAGT
JMFF051B04+ TGGAGTCTTTGAGGTCCGANATCCGGAAAGCCCTAGGAGACTGTGTGGACCCCCCCAAGT
JMFS077F08+ TGGAGTCTTTGAGGTCCGAAATCCGGAAAGCCCTAGGAGACTGTGTGGACCCCCCCAAGT
____________________________________________________________
consensus TGGAGTCTTTGAGGTCCGAAATCCGGAAAGCCCTAGGAGACTGTGTGGACCCCCCCAAGT

. : . : . : . : . : . :
JMSF022A21+ TCGTTATGGAGGCGATTTCTGAGGTGTTCCCGGTGGAC
JMSF053G03+ TCGTTATGGAGGCGATTTCTGAGGTGTTCCCGGTGGACAAGAGGGAGCTGAAGAGCGAGA
JMFS042C05+ TCGTTATGGAGGCGATTTCTGAGGTGTTCCCGGTGGACAAGAGGGAGCTGAAGAGCGAGA
JMFF051B04+ TCGTTATGGAGGCGATTTCTGAGGTGNTCCCGGTGGACA-GAGGGAGCTGAAGAGCGAGA
JMFS077F08+ TCGTTATGGAGGCGATTTCTGAGGTGTTCCCGGTGGACAAGAGGGAGCTGAAGAGCGAGA
____________________________________________________________
consensus TCGTTATGGAGGCGATTTCTGAGGTGTTCCCGGTGGACAAGAGGGAGCTGAAGAGCGAGA

. : . : . : . : . : . :
JMSF053G03+ GG
JMFS042C05+ GGAGCAATGATTTGGG
JMFF051B04+ GG
JMFS077F08+ GG
____________________________________________________________
consensus GGAGCAATGATTTGGG