Alignment Contig 7324

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFF012K19+ ATCGTCCCAAAAATCCTAAAACCCTAACCCCTGTTCTCCCAAACTCCCAGAGAGGGATAG
JMSF035D19+ TCCCAAAAATCCTAAAACCCTAACCCCTGTTCTCCCAAACTCCCAGAGAGGGATAA
JMSF041K02+ TCCCAAAAATCCTAAAACCCTAACCCCTGTTCTCCCAAACTCCCAGAGAGGGATAA
JMFS167D04+ CTAACCCCTGTTCTCCCAAACTCCCAGAGAGGGATAG
JMSF026A14+ AGAGAGGGATAG
JMSF034G17+ AGAGAGGGATAG
JMSF044C23+ AGAGAGGGATAG
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consensus ATCGTCCCAAAAATCCTAAAACCCTAACCCCTGTTCTCCCAAACTCCCAGAGAGGGATAG

. : . : . : . : . : . :
JMFF012K19+ TCACCAAGACAGCTCCCTTTCCTCCAGTTTCCAGCGAATTTCAACCATGGGGAAGAAATC
JMSF035D19+ TCACCAAGACAGCTCCCTTTCCTCCAGTTTCCAGCGAATTTCAACCATGGGGAAGAAATC
JMSF041K02+ TCACCAAGACAGCTCCCTTTCCTCCAGTTTCCAGCGAATTTCAACCATGGGGAAGAAATC
JMFS167D04+ TCACCAAGACAGCTCCCTTTCCTCCAGTTTCCAGCGAATTTCAACCATGGGGAAGAAATC
JMSF026A14+ TCACCAAGACAGCTCCCTTTCCTCCAGTTTCCAGCGAATTTCAACCATGGGGAAGAAATC
JMFS123D06+ TCACCAAGACAGCTCCCTTTCCTCCAGTTTCCAGCGAATTTCAACCATGGGGAAGAAATC
JMSF034G17+ TCACCAAGACAGCTCCCTTTCCTCCAGTTTCCAGCGAATTTCAACCATGGGGAAGAAATC
JMSF044C23+ TCACCAAGACAGCTCCCTTTCCTCCAGTTTCCAGCGAATTTCAACCATGGGGAAGAAATC
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consensus TCACCAAGACAGCTCCCTTTCCTCCAGTTTCCAGCGAATTTCAACCATGGGGAAGAAATC

. : . : . : . : . : . :
JMFF012K19+ AAATCCTACAAAGAACGACAATGCGAAGAAGCGGAAGAAGAAGAACAAGTCCGGGCCAAA
JMSF035D19+ AAATCCTACAAAGAACGACAATGCGAAGAAGCGGAAGAAGAAGAACAAGTCCGGGCCAAA
JMSF041K02+ AAATCCTACAAAGAACGACAATGCGAAGAAGCGGAAGAAGAAGAACAAGTCCGGGCCAAA
JMFS167D04+ AAATCCTACAAAGAACGACAATGCGAAGAAGCGGAAGAAGAAGAACAAGTCCGGGCCAAA
JMSF026A14+ AAATCCTACAAAGAACGACAATGCGAAGAAGCGGAAGAAGAAGAACAAGTCCGGGCCAAA
JMFS123D06+ AAATCCTACAAAGAACGACAATGCGAAGAAGCGGAAGAAGAAGAACAAGTCCGGGCCAAA
JMSF034G17+ AAATCCTACAAAGAACGACAATGCGAAGAAGCGGAAGAAGAAGAACAAGTCCGGGCCAAA
JMSF044C23+ AAATCCTACAAAGAACGACAATGCGAAGAAGCGGAAGAAGAAGAACAAGTCCGGGCCAAA
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consensus AAATCCTACAAAGAACGACAATGCGAAGAAGCGGAAGAAGAAGAACAAGTCCGGGCCAAA

. : . : . : . : . : . :
JMFF012K19+ GGCCATAGGCATGAAACTCAAAGCTCCCGCTCCCAATCCTTTCGAAGCCATCTGGTCTCG
JMSF035D19+ GGCCATAGGCATGAAACCCAAAGCTCCCGCTCCCAATCCTTTCGAAGCCATCTGGTCTCG
JMSF041K02+ GGCCATAGGCATGAAACCCAAAGCTCCCGCTCCCAATCCTTTCGAAGCCATCTGGTCTCG
JMFS167D04+ GGCCATAGGCATGAAACTCAAAGCTCCCGCTCCCAATCCTTTCGAAGCCATCTGGTCTCG
JMSF026A14+ GGCCATAGGCATGAAACTCAAAGCTCCCGCTCCCAATCCTTTCGAAGCCATCTGGTCTCG
JMFS123D06+ GGCCATAGGCATGAAACTCAAAGCTCCCGCTCCCAATCCTTTCGAAGCCATCTGGTCTCG
JMSF034G17+ GGCCATAGGCATGAAACTCAAAGCTCCCGCTCCCAATCCTTTCGAAGCCATCTGGTCTCG
JMSF044C23+ GGCCATAGGCATGAAACTCAAAGCTCCCGCTCCCAATCCTTTCGAAGCCATCTGGTCTCG
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consensus GGCCATAGGCATGAAACTCAAAGCTCCCGCTCCCAATCCTTTCGAAGCCATCTGGTCTCG

. : . : . : . : . : . :
JMFF012K19+ CCGGAAATTTGACATCCTCGGCAAGAAACGCAAAGGAGAAGAACGCCGTATCGGCCTCGC
JMSF035D19+ CCGGAAATTTGACATCCTCGGCAAGAAACGCAAAGGAGAAGAACGCCGTATCGGCCTCGC
JMSF041K02+ CCGGAAATTTGACATCCTCGGCAAGAAACGCAAAGGAGAAGAACGCCGTATCGGCCTCGC
JMFS167D04+ CCGGAAATTTGACATCCTCGGCAAGAAACGCAAAGGAGAAGAACGCCGTATCGGCCTCGC
JMSF026A14+ CCGGAAATTTGACATCCTCGGCAAGAAACGCAAAGGAGAAGAACGCCGTATCGGCCTCGC
JMFS123D06+ CCGGAAATTTGACATCCTCGGCAAGAAACGCAAAGGAGAAGAACGCCGTATCGGCCTCGC
JMSF034G17+ CCGGAAATTTGACATCCTCGGCAAGAAACGCANAGGAGAAGAACGCCGTATCGGCCTCGC
JMSF044C23+ CCGGAAATTTGACATCCTCGGCAAGAAACGCAAAGGAGAAGAACGCCGTATCGGCCTCGC
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consensus CCGGAAATTTGACATCCTCGGCAAGAAACGCAAAGGAGAAGAACGCCGTATCGGCCTCGC

. : . : . : . : . : . :
JMFF012K19+ CCGCTCTCTCGCCATAGAAAAGAGGAAGAATACGCTGCTGAAGGAGTATGAGCAAAGTGC
JMSF035D19+ CCGCTCTCTCGCCATAGAAAAGAGGAAGAATACGCTGCTGAAGGAGTATGAGCAAAGTGC
JMSF041K02+ CCGCTCTCTCGCCATAGAAAAGAGGAAGAATACGCTGCTGAAGGAGTATGAGCAAAGTGC
JMFS167D04+ CCGCTCTCTCGCCATAGAAAAGAGGAAGAATACGCTGCTGAAGGAGTATGAGCAAAGTGC
JMSF026A14+ CCGCTCTCTCGCCATAGAAAAGAGGAAGAATACGCTGCTGAAGGAGTATGAGCAAAGTGC
JMFS123D06+ CCGCTCTCTCGCCATAGAAAAGAGGAAGAATACGCTGCTGAAGGAGTATGAGCAAAGTGC
JMSF034G17+ CCGCTCTCTCGCCATAGAAAAGAGGAAGAATACGCTGCTGAAGGAGTATGAGCAAAGTGC
JMSF044C23+ CCGCTCTCTCGCCATAGAAAAGAGGAAGAATACGCTGCTGAAGGAGTATGAGCAAAGTGC
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consensus CCGCTCTCTCGCCATAGAAAAGAGGAAGAATACGCTGCTGAAGGAGTATGAGCAAAGTGC

. : . : . : . : . : . :
JMFF012K19+ GAAGTCTTCAGTGTTTGTTGACAAGAGAATTGGGGAGCAGAATGAAGAGCTTGGGGAGTT
JMSF035D19+ GAAGTCTTCAGTGTTTGTTGACAAGAGAATTGGGGAGCAGAATGAAGAGCTTGGGGAGTT
JMSF041K02+ GAAGTCTTCAGTGTTTGTTGACAAGAGAATTGGGGAGCAGAATGAAGAGCTTGGGGAGTT
JMFS167D04+ GAAGTCTTCAGTGTTTGTTGACAAGAGAATTGGGGAGCAGAATGAAGAGCTTGGGGAGTT
JMSF026A14+ GAAGTCTTCAGTGTTTGTTGACAAGAGAATTGGGGAGCAGAATGAAGAGCTTGGGGAGTT
JMFS123D06+ GAAGTCTTCAGTGTTTGTTGACAAGAGAATTGGGGAGCAGAATGAAGAGCTTGGGGAGTT
JMSF034G17+ GAAGTCTTCAGTGTTTGTTGACAAGAGAATTGGGGAGCAGAATGAAGAGCTTGGGGAGTT
JMSF044C23+ GAAGTCTTCAGTGTTTGTTGACAAGAGAATTGGGGAGCAGAATGAAGAGCTTGGGGAGTT
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consensus GAAGTCTTCAGTGTTTGTTGACAAGAGAATTGGGGAGCAGAATGAAGAGCTTGGGGAGTT

. : . : . : . : . : . :
JMFF012K19+ CGATAAAGCTATTCTCAGGTCTCAGCGCGAACGAAGGTTGAAATTGAAGAAAAAAAGCAA
JMSF035D19+ CGATAAAGCTATTCTCAGGTCTCAGCGCGAACGAAGGTTGAAATTGAAGAAAAAAAGCAA
JMSF041K02+ CGATAAAGCTATTCTCAGGTCTCAGCGCGAACGAAGGTTGAAATTGAAGAAAAAAAGCAA
JMFS167D04+ CGATAAAGCTATTCTCAGGTCTCAGCGCGAACGAAGGTTGAAATTGAAGAAAAAAAGCAA
JMSF026A14+ CGATAAAGCTATTCTCAGGTCTCAGCGCGAACGAAGGTTGAAATTGAAGAAAAAAAGCAA
JMFS123D06+ CGATAAAGCTATTCTCAGGTCTCAGCGCGAACGAAGGTTGAAATTGAAGAAAAAAAGCAA
JMSF034G17+ CGATAAAGCTATTCTCAGGTCTCAGCGCGAACGAAGGTTGAAATTGAAGAAAAAAAGCAA
JMSF044C23+ CGATAAAGCTATTCTCAGGTCTCAGCGCGAACGAAGGTTGAAATTGAAGAAAAAAAGCAA
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consensus CGATAAAGCTATTCTCAGGTCTCAGCGCGAACGAAGGTTGAAATTGAAGAAAAAAAGCAA

. : . : . : . : . : . :
JMFF012K19+ GTATAACTTGTCGGATGGGGAAGAAGA
JMSF035D19+ GTATAACTTGTCGGATGGGGAAGAAGAGGAATTAGATGTTGGATTCTCAGGAGGAAGGGA
JMSF041K02+ GTATAACTTGTCGGATGGGGAAGAAGAGGAATTANATGTTGGATTCTC
JMFS167D04+ GTATAACTTGTCGGATGGGGAAGAAGAGGAATTAGATGTTGGATTCTCAGGAGGAAGGGA
JMSF026A14+ GTATAACTTGTCGGATGGGGAAGAAGAGGAATTAGATGTTGGATTCTCAGGAGGAAGGGA
JMFS123D06+ GTATAACTTGTCGGATGGGGAAGAAGAGGAATTAGATGTTGGATTCTCAGGAGGAAGGGA
JMSF034G17+ GTATAACTTGTCGGATGGGGAAGAAGAGGAATTAGATGTTGGATTCTCAGGAGGAAGGGA
JMSF044C23+ GTATAACTTGTCGGATGGGGAAGAAGAGGAATTAGATGTTGGATTCTCAGGAGGAAGGGA
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consensus GTATAACTTGTCGGATGGGGAAGAAGAGGAATTAGATGTTGGATTCTCAGGAGGAAGGGA

. : . : . : . : . : . :
JMSF035D19+ TGATTTCGAGGATGAAGTACCATTCGATGAGGATGAAGATGATGGACTCAATGATGGTGA
JMFS167D04+ TGATTTCGAGGATGAAGTACCATTCGATGAGGATGAAGATGATGGACTCAATGATGGTGA
JMSF026A14+ TGATTTCGAGGATGAAGTACCATTCGATGAGGATGAAGATGATGGACTCAATGATGGTGA
JMFS123D06+ TGATTTCGAGGATGAAGTACCATTCGATGAGGATGAAGATGATGGACTCAATGATGGTGA
JMSF034G17+ TGATTTCGAGGATGAAGTACCATTCGATGAGGATGAAGATGATGGACTCAATGATGGTGA
JMSF044C23+ TGATTTCGAGGATGAAGTACCATTCGATGAGGATGAAGATGATGGACTCAATGATGGTGA
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consensus TGATTTCGAGGATGAAGTACCATTCGATGAGGATGAAGATGATGGACTCAATGATGGTGA

. : . : . : . : . : . :
JMSF035D19+ CAAGAGGTCAGCTATCTTGGAACAACTTGATTCTCATGGATCACAGGTTATGCAACGTGG
JMFS167D04+ NCAGAGGTCAGCTATCTTGGAACAACTTGATTCTCATGGATTACAG
JMSF026A14+ CAAGAGGTCAGCTATCTTGGAACAACTTGATTCTCATGGATCACAGGTTATGCAACGTGG
JMFS123D06+ CAAGAGGTCAGCTATCTTGGAACAACTTGATTCTCAT
JMSF034G17+ CAAGAGGTCAGCTATCTTGGAACAACTTGATTCTCATGGATCACAGGTTATGCAACGTGG
JMSF044C23+ CAAGAGGTCAGCTATCTTGGAACAACTTGATTCTCATGGATCACAGGTTATGCAACGTGG
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consensus CAAGAGGTCAGCTATCTTGGAACAACTTGATTCTCATGGATCACAGGTTATGCAACGTGG

. : . : . : . : . : . :
JMSF035D19+ TCTGGTGGA
JMSF026A14+ TCTGGTGGAAGGACAGGAAGATAGGCAAAAATCCAAGAAAGAAGTGATGGAAGAA
JMSF034G17+ TCTGGTGGAAGGACAGGAAGATAGGCAAAAATCCAAGAAAGAAGTGATGGAAGAA
JMSF044C23+ TCTGGTGGAAGGACAGGAAGATAGGCAAAAATCCAAGAAAGAAGTGATGGAAGAAATCAT
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consensus TCTGGTGGAAGGACAGGAAGATAGGCAAAAATCCAAGAAAGAAGTGATGGAAGAAATCAT

. : . : . : . : . : . :
JMSF044C23+ TTTGAAGAGTAAATTCTTCAAGGCTCAAAAAGCGAAGGATAAAGAAGA
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consensus TTTGAAGAGTAAATTCTTCAAGGCTCAAAAAGCGAAGGATAAAGAAGA