Alignment Contig 7181

                          .    :    .    :    .    :    .    :    .    :    .    :

rJMSF037B10+ AGACTGCCAATTTGCCTTTCAGATTTACTTACAATGCAGTTCATTATACAAAGAAACAGC
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consensus AGACTGCCAATTTGCCTTTCAGATTTACTTACAATGCAGTTCATTATACAAAGAAACAGC

. : . : . : . : . : . :
rJMSF037B10+ ACAAATGCAGAATTGTTAACTACTTTAATTTTGTCATCTCAAACAATTAATACTTCTTGC
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consensus ACAAATGCAGAATTGTTAACTACTTTAATTTTGTCATCTCAAACAATTAATACTTCTTGC

. : . : . : . : . : . :
rJMSF037B10+ TTGTAGAAAGCAATGGAAAACTGAAACCCATTCATTTACAGAGAGCAGCAAACAACAATT
rJMFF050I14+ TGGAAAACTGAAACCCATTCATTTACAGAGAGCAGCAAACAACAATT
rJMSF017J16+ TGGAAAACTGAAACCCATTCATTTACAGAGAGCAGCAAACAACAATT
rJMFF016C02+ ATT
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consensus TTGTAGAAAGCAATGGAAAACTGAAACCCATTCATTTACAGAGAGCAGCAAACAACAATT

. : . : . : . : . : . :
rJMSF037B10+ ATATATGGCTGAGGTGGGCTGGAGTCACTAGAACACAATTCTTCATGTTATCCTAAAATA
rJMFF050I14+ ATATATGGCTGAGGTGGGCTGGAGTCACTAGAACACAATTCTTCATGTTATCCTAAAATA
rJMSF017J16+ ATATATGGCTGAGGTGGGCTGGAGTCACTAGAACACAATTCTTCATGTTATCCTAAAATA
rJMFF016C02+ ATATATGGCTGAGGTGGGCTGGAGTCACTAGAACACAATTCTTCATGTTATCCTAAAATA
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consensus ATATATGGCTGAGGTGGGCTGGAGTCACTAGAACACAATTCTTCATGTTATCCTAAAATA

. : . : . : . : . : . :
rJMSF037B10+ TTATTCTGTAAGTTCTTTTTTCTGTCATGTAAATGCAGCAGTCAGCAGGTTTTCAGCTGT
rJMFF050I14+ TTATTCTGTAAGTTCTTTTTTCTGTCATGTAAATGCAGCAGTCAGCAGGTTTTCAGCTGT
rJMSF017J16+ TTATTCTGTAAGTTCTTTTTTCTGTCATGTAAATGCAGCAGTCAGCAGGTTTTCAGCTGT
rJMFF016C02+ TTATTCTGTAAGTTCTTTTTTCTGTCATGTAAATGCAGCAGTCAGCAGGTTTTCAGCTGT
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consensus TTATTCTGTAAGTTCTTTTTTCTGTCATGTAAATGCAGCAGTCAGCAGGTTTTCAGCTGT

. : . : . : . : . : . :
rJMSF037B10+ TTTAAAGACCAAATTCGAACTAACCAGCTACCATCTCCAACTTTCATATCAGTTATCCTT
rJMFF050I14+ TTTAAAGACCAAATTCGAACTAACCAGCTACCATCTCCAACTTTCATATCAGTTATCCTT
rJMSF017J16+ TTTAAAGACCAAATTCGAACTAACCAGCTACCATCTCCAACTTTCATATCAGTTATCCTT
rJMFF016C02+ TTTAAAGACCAAATTCGAACTAACCAGCTACCATCTCCAACTTTCATATCAGTTATCCTT
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consensus TTTAAAGACCAAATTCGAACTAACCAGCTACCATCTCCAACTTTCATATCAGTTATCCTT

. : . : . : . : . : . :
rJMSF037B10+ CGTTTGCCTTTTCTATCAACTTCATCTTTTGTTGAAATTGGGTCCGAATGAACTATAGAT
rJMFF050I14+ CGTTTGCCTTTTCTATCAACTTCATCTTTTGTTGAAATTGGGTCCGAATGAACTATAGAT
rJMSF017J16+ CGTTTGCCTTTTCTATCAACTTCATCTTTTGTTGAAATTGGGTCCGAATGAACTATAGAT
rJMFF016C02+ CGTTTGCCTTTTCTATCAACTTCATCTTTTGTTGAAATTGGGTCCGAATGAACTATAGAT
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consensus CGTTTGCCTTTTCTATCAACTTCATCTTTTGTTGAAATTGGGTCCGAATGAACTATAGAT

. : . : . : . : . : . :
rJMSF037B10+ GGACGAGGATCCCCGATTCCAGTTGATGCTTCTAAAACCTTGTTTAACATGTCTAGAACC
rJMFF050I14+ GGACGAGGATCCCCGATTCCAGTTGATGCTTCTAAAACCTTGTTTAACATGTCTAGAACC
rJMSF017J16+ GGACGAGGATCCCCGATTCCAGTTGATGCTTCTAAAACCTTGTTTAACATGTCTAGAACC
rJMFF016C02+ GGACGAGGATCCCCGATTCCAGTTGATGCTTCTAAAACCTTGTTTAACATGTCTAGAACC
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consensus GGACGAGGATCCCCGATTCCAGTTGATGCTTCTAAAACCTTGTTTAACATGTCTAGAACC

. : . : . : . : . : . :
rJMSF037B10+ TCACTCATCTTTGGTCGTGACTTGGGGTGTCTGACCAAGCAGCGGTTTGCAACGAGAGAG
rJMFF050I14+ TCACTCATCTTTGGTCGTGACTTGGGGTGTCTGACCAAGCAGCGGTTTGCAACGAGAGAG
rJMSF017J16+ TCACTCATCTTTGGTCGTGACTTGGGGTGTCTGACCAAGCAGCGGTTTGCAACGAGAGAG
rJMFF016C02+ TCACTCATCTTTGGTCGTGACTTGGGGTGTCTGACCAAGCAGCGGTTTGCAACGAGAGAG
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consensus TCACTCATCTTTGGTCGTGACTTGGGGTGTCTGACCAAGCAGCGGTTTGCAACGAGAGAG

. : . : . : . : . : . :
rJMSF037B10+ AGCTTGTGGGCAGACTTTAAGATATTACCCTCAAGCCTAGGGTCTATGATCTGTCGAAAC
rJMFF050I14+ AGCTTGTGGGCAGACTTTAAGATATTACCCTCAAGCCTAGGGTCTATGATCTGTCGAAAC
rJMSF017J16+ AGCTTGTGGGCAGACTTTAAGATATTACCCTCAAGCCTAGGGTCTATGATCTGTCGAAAC
rJMFF016C02+ AGCTTGTGGGCAGACTTTAAGATATTACCCTCAAGCCTAGGGTCTATGATCTGTCGAAAC
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consensus AGCTTGTGGGCAGACTTTAAGATATTACCCTCAAGCCTAGGGTCTATGATCTGTCGAAAC

. : . : . : . : . : . :
rJMSF037B10+ TTCTTGGAATCTGACAGATGTGGCTTTACCCATTCCAAGAGTTTCTGCTCACTCCTCGGG
rJMFF050I14+ TTCTTGGAATCTGACAGATGTGGCTTTACCCATTCCAAGAGTTTCTGCTCACTCCTCGGG
rJMSF017J16+ TTCTTGGAATCTGACAGATGTGGCTTTACCCATTCCAAGAGTTTCTGCTCACTCCTCGGG
rJMFF016C02+ TTCTTGGAATCTGACAGATGTGGCTTTACCCATTCCAAGAGTTTCTGCTCACTCCTCGGG
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consensus TTCTTGGAATCTGACAGATGTGGCTTTACCCATTCCAAGAGTTTCTGCTCACTCCTCGGG

. : . : . : . : . : . :
rJMSF037B10+ CGATTCCTATCCNATGGTGGTCTCCCTGTGATGAGTTCATAAAGAAAGACTCCATAACTC
rJMFF050I14+ CGATTCCTATCCAATGGTGGT
rJMSF017J16+ CGATTCCTATCCAATGGTGGTCTCCCTGTGATGAGTTCATAAAGAAAGACTCCATAACTC
rJMFF016C02+ CGATTCCTATCCAATGGTGGTCTCCCTGTGATGAGTTCATAAAGAAAGACTCCATAACTC
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consensus CGATTCCTATCCAATGGTGGTCTCCCTGTGATGAGTTCATAAAGAAAGACTCCATAACTC

. : . : . : . : . : . :
rJMSF037B10+ CACACATCATTCTTGGATGTGAGCCGACCAGTTTGAACATATT
rJMSF017J16+ CACACATCATTCTTGGATGTGAGCCGACCAGTTTGAACATATTCAGGAGAAGCATATCCC
rJMFF016C02+ CACACATCATTCTTGGATGTGAGCCGACCAGTTTGAACATATTCAGGAGAAGCATATCCC
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consensus CACACATCATTCTTGGATGTGAGCCGACCAGTTTGAACATATTCAGGAGAAGCATATCCC

. : . : . : . : . : . :
rJMSF017J16+ ATAGTACCAACTACTGCAGTTGAGATATGAGTCAGTCCTTCTTGAGGGCCCAGCCTAGCT
rJMFF016C02+ ATAGTACCAACTACTGCAGTTGAGATATGAGTCAGTCCTTCTTGAGGGCCCAGCCTAGCT
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consensus ATAGTACCAACTACTGCAGTTGAGATATGAGTCAGTCCTTCTTGAGGGCCCAGCCTAGCT

. : . : . : . : . : . :
rJMSF017J16+ AACCCAAAGTCCGAGAGCTTTGCATTCCATTGCTCATCTA
rJMFF016C02+ AACCCAAAGTCCGAGAGCTTTGCATTCCATTGCTCATCTAAGAGAATATTCGAAGATTTG
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consensus AACCCAAAGTCCGAGAGCTTTGCATTCCATTGCTCATCTAAGAGAATATTCGAAGATTTG

. : . : . : . : . : . :
rJMFF016C02+ AAATCTCTGAAAATAATCTGAAAATCCATCCCTTCATGTANATATGCTAAGCCACAAGCA
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consensus AAATCTCTGAAAATAATCTGAAAATCCATCCCTTCATGTANATATGCTAAGCCACAAGCA

. : . : . : . : . : . :
rJMFF016C02+ GCATCTCTAGCTATTTT
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consensus GCATCTCTAGCTATTTT