Alignment Contig 6959

                          .    :    .    :    .    :    .    :    .    :    .    :

rJMFF045G05+ CCTTATGGCGGATCACCCTGGAGAGXXXXXXXXXXXXXXXXXXXXGGGAAATCTGAGAAC
____________________________________________________________
consensus CCTTATGGCGGATCACCCTGGAGAGNNNNNNNNNNNNNNNNNNNNGGGAAATCTGAGAAC

. : . : . : . : . : . :
rJMFF045G05+ GATTTTAAAATCTATTGCTTTAGTTCAATAAGATTAACTGGACAACTGCAGTGCACTGTG
rJMSF036C07+ AAGATTAACTGGACAACTGCAGTGCACTGTG
rJMSF013K17+ AACTGGACAACTGCAGTGCACTGTG
____________________________________________________________
consensus GATTTTAAAATCTATTGCTTTAGTTCAATAAGATTAACTGGACAACTGCAGTGCACTGTG

. : . : . : . : . : . :
rJMFF045G05+ GCAATTACAG-TCCATGGATTTGGATCTGGACAAGATGCAATTTACAGAATTACAGTGTC
rJMSF036C07+ GCAATTACAG-TCCATGGATTTGGATCTGGACAAGATGCAATTTACAGAATTACAGTGTC
rJMSF013K17+ GCAATTACAGGTCCATGGATTTGGATCTGGACAAGATGCAATTTACAGAATTACAGTGTC
rJMSF040P11+ GTCCATGGATTTGGATCTGGACAAGATGCAATTTACAGAATTACAGTGTC
rJMSF031K11+ AGAATTACAGTGTC
____________________________________________________________
consensus GCAATTACAGGTCCATGGATTTGGATCTGGACAAGATGCAATTTACAGAATTACAGTGTC

. : . : . : . : . : . :
rJMFF045G05+ AAACACCCCTACAAAGGTATGAAGTTTTTACGGTTTTACCCACTGACCACTAAAAAGAAT
rJMSF036C07+ AAACACCCCTACAAAGGTATGAAGTTTTTACGGTTTTACCCACTGACCACTAAAAAGAAT
rJMSF013K17+ AAACACCCCTACAAAGGTATGAAGTTTTTACGGTTTTACCCACTGACCACTAAAAAGAAT
rJMSF040P11+ AAACACCCCTACAAAGGTATGAAGTTTTTACGGTTTTACCCACTGACCACTAAAAAGAAT
rJMSF031K11+ AAACACCCCTACAAAGGTATGAAGTTTTTACGGTTTTACCCACTGACCACTAAAAAGAAT
____________________________________________________________
consensus AAACACCCCTACAAAGGTATGAAGTTTTTACGGTTTTACCCACTGACCACTAAAAAGAAT

. : . : . : . : . : . :
rJMFF045G05+ AACCTCATGAAAATGTAGACTTCATTGGATTTCTTCAATTCTTCCCCTAAAAACTGCTAT
rJMSF036C07+ AACCTCATGAAAATGTAGACTTCATTGGATTTCTTCAATTCTTCCCCTAAAAACTGCTAT
rJMSF013K17+ AACCTCATGAAAATGTAGACTTCATTGGATTTCTTCAATTCTTCCCCTAAAAACTGCTAT
rJMSF040P11+ AACCTCATGAAAATGTAGACTTCATTGGATTTCTTCAATTCTTCCCCTAAAAACTGCTAT
rJMSF031K11+ AACCTCATGAAAATGTAGACTTCATTGGATTTCTTCAATTCTTCCCCTAAAAACTGCTAT
____________________________________________________________
consensus AACCTCATGAAAATGTAGACTTCATTGGATTTCTTCAATTCTTCCCCTAAAAACTGCTAT

. : . : . : . : . : . :
rJMFF045G05+ TTCAAGTGTGCCTGTTCTGGCAATCTATTCCAGGACTTGAGCAGGCCATAGCCGCTTCCA
rJMSF036C07+ TTCAAGTGTGCCTGTTCTGGCAATCTATTCCAGGACTTGAGCAGGCCATAGCCGCTTCCA
rJMSF013K17+ TTCAAGTGTGCCTGTTCTGGCAATCTATTCCAGGACTTGAGCAGGCCATAGCCGCTTCCA
rJMSF040P11+ TTCAAGTGTGCCTGTTCTGGCAATCTATTCCAGGACTTGAGCAGGCCATAGCCGCTTCCA
rJMSF031K11+ TTCAAGTGTGCCTGTTCTGGCAATCTATTCCAGGACTTGAGCAGGCCATAGCCGCTTCCA
____________________________________________________________
consensus TTCAAGTGTGCCTGTTCTGGCAATCTATTCCAGGACTTGAGCAGGCCATAGCCGCTTCCA

. : . : . : . : . : . :
rJMFF045G05+ CGTAGAGATCACTTCGCGGCTTTCAACTTTCTGGATTCCTCCGTAGAACCCTTCTGCCTC
rJMSF036C07+ CGTAGAGATCACTTCGCGGCTTTCAACTTTCTGGATTCCTCCGTAGAACCCTTCTGCCTC
rJMSF013K17+ CGTAGAGATCACTTCGCGGCTTTCAACTTTCTGGATTCCTCCGTAGAACCCTTCTGCCTC
rJMSF040P11+ CGTAGAGATCACTTCGCGGCTTTCAACTTTCTGGATTCCTCCGTAGAACCCTTCTGCCTC
rJMSF031K11+ CGTAGAGATCACTTCGCGGCTTTCAACTTTCTGGATTCCTCCGTAGAACCCTTCTGCCTC
____________________________________________________________
consensus CGTAGAGATCACTTCGCGGCTTTCAACTTTCTGGATTCCTCCGTAGAACCCTTCTGCCTC

. : . : . : . : . : . :
rJMFF045G05+ GTTTCCTTCCTCACGATGGTCTTTTCTGCTAACGGTTGTTCTTCTCCACCGCGAACCAGG
rJMSF036C07+ GTTTCCTTCCTCACGATGGTCTTTTCTGCTAACGGTTGTTCTTCTCCACCGCGAACCAGG
rJMSF013K17+ GTTTCCTTCCTCACGATGGTCTTTTCTGCTAACGGTTGTTCTTCTCCACCGCGAACCAGG
rJMSF040P11+ GTTTCCTTCCTCACGATGGTCTTTTCTGCTAACGGTTGTTCTTCTCCACCGCGAACCAGG
rJMSF031K11+ GTTTCCTTCCTCACGATGGTCTTTTCTGCTAACGGTTGTTCTTCTCCACCGCGAACCAGG
____________________________________________________________
consensus GTTTCCTTCCTCACGATGGTCTTTTCTGCTAACGGTTGTTCTTCTCCACCGCGAACCAGG

. : . : . : . : . : . :
rJMFF045G05+ TGAATACTGATTGAACTCGAGCACTACAGTATCTGCACAGCATATGAGATGGCCAGAATA
rJMSF036C07+ TGAATACTGATTGAACTCGAGCACTACAGTATCTGCACAGCATATGAGATGGCCAGAATA
rJMSF013K17+ TGAATACTGATTGAACTCGAGCACTACAGTATCTGCACAGCATATGAGATGGCCAGAATA
rJMSF040P11+ TGAATACTGATTGAACTCGAGCACTACAGTATCTGCACAGCATATGAGATGGCCAGAATA
rJMSF031K11+ TGAATACTGATTGAACTCGAGCACTACAGTATCTGCACAGCATATGAGATGGCCAGAATA
____________________________________________________________
consensus TGAATACTGATTGAACTCGAGCACTACAGTATCTGCACAGCATATGAGATGGCCAGAATA

. : . : . : . : . : . :
rJMFF045G05+ AGAGGTTTTCACTTTTCA
rJMSF036C07+ AGAGGTTTTCACTTTTCAAGATCTACCCTCACCCACAATTGTTTATTAGCTTTGTGGTCA
rJMSF013K17+ AGAGGTTTTCACTTTTCAAGATCTACCCTCACCCACAATTGTTTATTAGCTTTGTGGTCA
rJMSF040P11+ AGAGGTTTTCACTTTTCAAGATCTACCCTCACCCACAATTGTTTATTAGCTTTGTGGTCA
rJMSF031K11+ AGAGGTTTTCACTTTTCAAGATCTACCCTCACCCACAATTGTTTATTAGCTTTGTGGTCA
____________________________________________________________
consensus AGAGGTTTTCACTTTTCAAGATCTACCCTCACCCACAATTGTTTATTAGCTTTGTGGTCA

. : . : . : . : . : . :
rJMSF036C07+ TATTTAATTAACAAAGAATGACAGACACAAACATACTGGCTTGTTTGGTAAAATAGTTAG
rJMSF013K17+ TATTTAATTAACAAAGAATGACAGACACAAACATACTGGCTTGTTTGGTAAAATAGTTAG
rJMSF040P11+ TATTTAATTAACAAAGAATGACAGACACAAACATACTGGCTTGTTTGGTAAAATAGTTAG
rJMSF031K11+ TATTTAATTAACAAAGAATGACAGACACAAACATACTGGCTTGTTTGGTAAAATAGTTAG
____________________________________________________________
consensus TATTTAATTAACAAAGAATGACAGACACAAACATACTGGCTTGTTTGGTAAAATAGTTAG

. : . : . : . : . : . :
rJMSF036C07+ CCTATAGGTTAATTTTAGCTTATTTGACTACTATCAGCTTTTTGATTTGGTTAAAAATCA
rJMSF013K17+ CCTATAGGTTAATTTTAGCTTATTTGACTACTATCAGCTTTTTGATTTGGTTAAAAATCA
rJMSF040P11+ CCTATAGGTTAATTTTAGCTTATTTGACTACTATCAGCTTTTTGATTTGGTTAAAAATCA
rJMSF031K11+ CCTATAGGTTAATTTTAGCTTATTTGACTACTATCAGCTTTTTGATTTGGTTAAAAATCA
____________________________________________________________
consensus CCTATAGGTTAATTTTAGCTTATTTGACTACTATCAGCTTTTTGATTTGGTTAAAAATCA

. : . : . : . : . : . :
rJMSF036C07+ ATATAAGTATTTGGTTAATTAGCTTTTTGCAACTCTAAAATGTTAAAATTCAAAAAGCTG
rJMSF013K17+ ATATAAGTATTTGGTTAATTAGCTTTTTGCAACTCTAAAATGTTAAAATTCAAAAA
rJMSF040P11+ ATATAAGTATTTGGTTAATTAGCTTTTTGCAACTCTAAAATGTTAAAATTCAAAAAGCTG
rJMSF031K11+ ATATAAGTATTTGGTTAATTAGCTTTTTGCAACTCTAAAATGTTAAAATTCAAAAAGCTG
____________________________________________________________
consensus ATATAAGTATTTGGTTAATTAGCTTTTTGCAACTCTAAAATGTTAAAATTCAAAAAGCTG

. : . : . : . : . : . :
rJMSF036C07+ CTCAAAGCAACTTTTTCAATNAGCTTTTTAAGAAAAAAA-TTATACCAAACAGCTAATTT
rJMSF040P11+ CTCAAAGCAACTTTTTCAATTAGCTTTTTAAGAAAAAAAATTATACCAAACAGCTA
rJMSF031K11+ CTCAAAGCAACTTTTTCAATTAGCTTTTTAAGAAAAAAAATTATACCAAACAGCTAATTT
rJMFF043A07+ AAATTATACCAAACAGCTAATTT
____________________________________________________________
consensus CTCAAAGCAACTTTTTCAATTAGCTTTTTAAGAAAAAAAATTATACCAAACAGCTAATTT

. : . : . : . : . : . :
rJMSF036C07+ ACCAAACACTTTTCTACANTCAGCTAATGNTATTAACTAATTATACCC
rJMSF031K11+ ACCAAACACTTTTCTACAATCAGCTAATGTTATTAACTAATTATACCC
rJMFF043A07+ ACCAAACGTTTTTCTACAATCAGCTAATGTTATTAACTATTTATACCCTCTAATTAACAC
rJMSF021N19+ AAACGTTTTTCTACAATCAGCTAATGTTATTAACTATTTATACCCTCTAATTAACAC
____________________________________________________________
consensus ACCAAACACTTTTCTACAATCAGCTAATGTTATTAACTAATTATACCCTCTAATTAACAC

. : . : . : . : . : . :
rJMFF043A07+ AATCAGCTAACAGCTATCAACTATCAACTAACAGCCATTTTACCAAACAGGGCTATATAT
rJMSF021N19+ AATCAGCTAACAGCTATCAACTATCAACTAACAGCCATTTTACCAAACAGGGCTATATAT
____________________________________________________________
consensus AATCAGCTAACAGCTATCAACTATCAACTAACAGCCATTTTACCAAACAGGGCTATATAT

. : . : . : . : . : . :
rJMFF043A07+ ATTAATTCTCAACCATAATCCACAGCAAGCAAGCAAGCTAATTACAGATTGTATAATAGT
rJMSF021N19+ ATTAATTCTCAACCATAATCCACAGCAAGCAAGCAAGCTAATTACAGATTGTATAATAGT
rJMFF006N08+ TAATTCTCAACCATAATCCACAGCAAGCAAGCAAGCTAATTACAGATTGTATAATAGT
rJMSF009P14+ AGCAAGCTAATTACAGATTGTATAATAGT
JMFN006E04- AATTACAGATTGTATAATAGT
rJMFF001K24+ ATAATCCACAGCAAGCAAGCAAGCTAATTACAGATTGTATAATAGT
____________________________________________________________
consensus ATTAATTCTCAACCATAATCCACAGCAAGCAAGCAAGCTAATTACAGATTGTATAATAGT

. : . : . : . : . : . :
rJMFF043A07+ CCATCTTTCTTCTTCAACGTGGCCAAAATTAAAAAACCATTAAAAGGGTGAAGACAAAAT
rJMSF021N19+ CCATCTTTCTTCTTCAACGTGGCCAAAATTAAAAAACCATTAAAAGGGTGAAGACAAAAT
rJMFF006N08+ CCATCTTTCTTCTTCAACGTGGCCAAAATTAAAAAACCATTAAAAGGGTGAAGACAAAAT
rJMSF009P14+ CCATCTTTCTTCTTCAACGTGGCCAAAATTAAAAAACCATTAAAAGGGTGAAGACAAAAT
JMFN006E04- CCATCTTTCTTCTTCAACGTGGCCAAAATTAAAAAACCATTAAAAGGGTGAAGACAAAAT
rJMFF001K24+ CCATCTTTCTTCTTCAACGTGGCCAAAATTAAAAAACCATTAAAAGGGTGAAGACAAAAT
____________________________________________________________
consensus CCATCTTTCTTCTTCAACGTGGCCAAAATTAAAAAACCATTAAAAGGGTGAAGACAAAAT

. : . : . : . : . : . :
rJMFF043A07+ CCCCATCCTACAACAAGGGCAATGTGCATTTGTGTCAAGCCAAGGAAGCAAACACCTTGA
rJMSF021N19+ CCCCATCCTACAACAAGGGCAATGTGCATTTGTGTCAAGCCAAGGAAGCAAACACCTTGA
rJMFF006N08+ CCCCATCCTACAACAAGGGCAATGTGCATTTGTGTCAAGCCAAGGAAGCAAACACCTTGA
rJMSF009P14+ CCCCATCCTACAACAAGGGCAATGTGCATTTGTGTCAAGCCAAGGAAGCAAACACCTTGA
JMFN006E04- CCCCATCCTACAACAAGGGCAATGTGCATNTGTGTCAAGCCAAGGAAGCAAACACCTTGA
rJMFF001K24+ CCCCATCCTACAACAAGGGCAATGTGCATTTGTGTCAAGCCAAGGAAGCAAACACCTTGA
JMSF021N19- CTACAACAAGGGCAATGTGCATTTGTGTCAAGCCAAGGAAGCAAACACCTTGA
JMFN006J07- ACAACAAGGGCAATGTGCATTTGTGTCAAGCCAAGGAAGCAAACACCTTGA
JMFF043A07- AACAAGGGCAATGTGCATTTGTGTCAAGCCAAGGAAGCAAACACCTGAG
____________________________________________________________
consensus CCCCATCCTACAACAAGGGCAATGTGCATTTGTGTCAAGCCAAGGAAGCAAACACCTTGA

. : . : . : . : . : . :
rJMFF043A07+ GTGGAACCTATGGGAACATGGCAGCTGCATCAATGTCTCACCAACCTTAAAGTGGTCCAA
rJMSF021N19+ GTGGAACCTATGGGAACATGGCAGCTGCATCAATGTCTCACCAACCTTAAAGTGGTCCAA
rJMFF006N08+ GTGGAACCTATGGGAACATGGCAGCTGCATCAATGTCTCACCAACCTTAAAGTGGTCCAA
rJMSF009P14+ GTGGAACCTATGGGAACATGGCAGCTGCATCAATGTCTCACCAACCTTAAAGTGGTCCAA
JMFN006E04- GTGGAACCTATGGGAACATGGCAGCTGCATCAATGTCTCACCAACCTTAAAGTGGTCCAA
rJMFF001K24+ GTGGAACCTATGGGAACATGGCAGCTGCATCAATGTCTCACCAACCTTAAAGTGGTCCAA
JMSF021N19- GTGGAACCTATGGGAACATGGCAGCTGCATCAATGTCTCACCAACCTTAAAGTGGTCCAA
JMFN006J07- GTGGAACCTATGGGAACATGGCAGCTGCATCAATGTCTCACCAACCTTAAAGTGGTCCAA
JMFF043A07- TNGGAACCTATGGGAACATGGCAGCTGCATCAATGTCTCACCAACCTTAAAGTGGTCCAA
____________________________________________________________
consensus GTGGAACCTATGGGAACATGGCAGCTGCATCAATGTCTCACCAACCTTAAAGTGGTCCAA

. : . : . : . : . : . :
rJMFF043A07+ ACATATGGCACACTCTTCCTCCTCCTCTGACGCTTTCCACCCCAACTTTTTTGCCCATTT
rJMSF021N19+ ACATATGGCACACTCTTCCTCCTCCTCTGACGCTTTCCACCCCAACTTTTTTGCCCATTT
rJMFF006N08+ ACATATGGCACACTCTTCCTCCTCCTCTGACGCTTTCCACCCCAACTTTTTTGCCCATTT
rJMSF009P14+ ACATATGGCACACTCTTCCTCCTCCTCTGACGCTTTCCACCCCAACTTTTTTGCCCATTT
JMFN006E04- ACATATGGCACACTCTTCCTCCTCCTCTGACGCTTTCCACCCCAACTTTTTTGCCCATTT
rJMFF001K24+ ACATATGGCACACTCTTCCTCCTCCTCTGACGCTTTCCACCCCAACTTTTTTGCCCATTT
JMSF021N19- ACATATGGCACACTCTTCCTCCTCCTCTGACGCTTTCCACCCCAACTTTTTTGCCCATTT
JMFN006J07- ACATATGGCACACTCTTCCTCCTCCTCTGACGCTTTCCACCCCAACTTTTTTGCCCATTT
JMFF043A07- ACATATGGCACACTCTTCCTCCTCCTCTGACGCTTTCCACCCCAACTTTTTTGCCCATTT
____________________________________________________________
consensus ACATATGGCACACTCTTCCTCCTCCTCTGACGCTTTCCACCCCAACTTTTTTGCCCATTT

. : . : . : . : . : . :
rJMFF043A07+ CATCGCCTTGCTCTTTAACATCTGCACATCTCCCATCACCATTCCCCCCTTTTCTGCTGC
rJMSF021N19+ CATCGCCTTGCTCTTTAACATCTGCACATCTCCCATCACCATTCCCCCCTTT-CTGCTGC
rJMFF006N08+ CATCGCCTTGCTCTTTAACATCTGCACATCTCCCATCACCATTCCCCCCTTTTCTGCTGC
rJMSF009P14+ CATCGCCTTGCTCTTTAACATCTGCACATCTCCCATCACCATTCCCCCCTTTTCTGCTGC
JMFN006E04- CATCGCCTTGCTCTTTAACATCTGCACATCTCCCATCACCATTCCCCCCTTTTCTGCTGC
rJMFF001K24+ CATCGCCTTGCTCTTTAACATCTGCACATCTCCCATCACCATTCCCCCCTTTTCTGCTGC
JMSF021N19- CATCGCCTTGCTCTTTAACATCTGCACATCTCCCATCACCATTCCCCCCTTT-CTGCTGC
JMFN006J07- CATCGCCTTGCTCTTTAACATCTGCACATCTCCCATCACCATTCCCCCCTTTTCTGCTGC
JMFF043A07- CATCGCCTTGCTCTTTAACATCTGCACATCTCCCATCACCATTCCCCCCTTTTCTGCTGC
JMFF006N08- ATTCCCCCCTTTTCTGCTGC
____________________________________________________________
consensus CATCGCCTTGCTCTTTAACATCTGCACATCTCCCATCACCATTCCCCCCTTTTCTGCTGC

. : . : . : . : . : . :
rJMFF043A07+ CGTTTTTCTACAATTCCTTTTGTGGTCAGATTTGCAATGACCTGATTTCAGCCTCTCATC
rJMSF021N19+ CGTTTTTCTACAATTCCTTTTGTGGTCAGATTTGCAATGACCTGATTTCAGCCTCTCATC
rJMFF006N08+ CGTTTTTCTACAATTCCTTTTGTGGTCAGATTTGCAATGACCTGATTTCAGCCTCTCATC
rJMSF009P14+ CGTTTTTCTACAATTCCTTTTGTGGTCAGATTTGCAATGACCTGATTTCAGCCTCTCATC
JMFN006E04- CGTTTTTCTACAATTCCTTTTGTGGTCAGATTTGCAATGACCTGATTTCAGCCTCTCATC
rJMFF001K24+ CGTTTTTCTACAATTCCTTTTGTGGTCAGATTTGCAATGACCTGATTTCAGCCTCTCATC
JMSF021N19- CGTTTTTCTACAATTCCTTTTGTGGTCAGATTTGCAATGACCTGATTTCAGCCTCTCATC
JMFN006J07- CGTTTTTCTACAATTCCTTTTGTGGTCAGATTTGCAATGACCTGATTTCAGCCTCTCATC
JMFF043A07- CGTTTTTCTACAATTCCTTTTGTGGTCAGATTTGCAATGACCTGATTTCAGCCTCTCATC
JMFF006N08- CGTTTTTCTACAATTCCTTTTGTGGTCAGATTTGCAATGACCTGATTTCAGCCTCTCATC
____________________________________________________________
consensus CGTTTTTCTACAATTCCTTTTGTGGTCAGATTTGCAATGACCTGATTTCAGCCTCTCATC

. : . : . : . : . : . :
rJMFF043A07+ CAATCTTTCCTTGGCTTC
rJMSF021N19+ CAATCTTTCCTTGGCTTCTCTGGCGGCAGCACCTAGCTTCTCATCTTGGTACGCCTTCCC
rJMFF006N08+ CAATCTTTCCTTGGCTTCTCTGGCGGCAGCACCTAGCTTCTCATCTTGGTACGCCTTCCC
rJMSF009P14+ CAATCTTTCCTTGGCTTCTCTGGCGGCAGCACCTAGCTTCTCATCTTGGTACGCCTTCCC
JMFN006E04- CAATCTTTCCTTGGCTTCTCTGGCGGCAGCACCTAGCTTCTCATCTTGGTACGCCTTCCC
rJMFF001K24+ CAATCTTTCCTTGGCTTCTCTGGCGGCAGCACCTAGCTTCTCATCTTGGTACGCCTTCCC
JMSF021N19- CAATCTTTCCTTGGCTTCTCTGGCGGCAGCACCTAGCTTCTCATCTTGGTACGCCTTCCC
JMFN006J07- CAATCTTTCCTTGGCTTCTCTGGCGGCAGCACCTAGCTTCTCATCTTGGTACGCCTTCCC
JMFF043A07- CAATCTTTCCTTGGCTTCTCTGGCGGCAGCACCTAGCTTCTCATCTTGGTACGCCTTCCC
JMFF006N08- CAATCTTTCCTTGGCTTCTCTGGCGGCAGCACCTAGCTTCTCATCTTGGTACGCCTTCCC
____________________________________________________________
consensus CAATCTTTCCTTGGCTTCTCTGGCGGCAGCACCTAGCTTCTCATCTTGGTACGCCTTCCC

. : . : . : . : . : . :
rJMSF021N19+ AATCGTACTCCTTTG---CATGGATGAGGAGCTTGAGCTTGAGCTGAGATGGGAATCATG
rJMFF006N08+ AATCGTACTCCTTTGCTGCATGGATGAGGAGCTTGAGCTTGAGCTGAGATGGGAATCATG
rJMSF009P14+ AATCGTACTCCTTTG---CATGGATGAGGAGCTTGAGCTTGAGCTGAGATGGGAATCATG
JMFN006E04- AATCGTACTCCTTTG---CATGGATGAGGAGCTTGAGCTTGAGCTGAGATGGGAATCATG
rJMFF001K24+ AATCGTACTCCTTTGCTGCATGGATGAGGAGCTTGAGCTTGAGCTGAGATGGGAATCATG
JMSF021N19- AATCGTACTCCTTTG---CATGGATGAGGAGCTTGAGCTTGAGCTGAGATGGGAATCATG
JMFN006J07- AATCGTACTCCTTTG---CATGGATGAGGAGCTTGAGCTTGAGCTGAGATGGGAATCATG
JMFF043A07- AATCGTACTCCTTTG---CATGGATGAGGAGCTTGAGCTTGAGCTGAGATGGGAATCATG
JMFF006N08- AATCGTACTCCTTTGCTGCATGGATGAGGAGCTTGAGCTTGAGCTGAGATGGGAATCATG
____________________________________________________________
consensus AATCGTACTCCTTTG---CATGGATGAGGAGCTTGAGCTTGAGCTGAGATGGGAATCATG

. : . : . : . : . : . :
rJMSF021N19+ GTTGCTTGCGTACAGGCAAAAGGACGACCTTCTTGTGGAGGAGGAAGTGGTGGTGGA
rJMFF006N08+ GTTGCTTGTGTACAGGCAAAAGGACGACCTTCTTGTGGAGGAGGAAGTGGTGGTGGA-GG
rJMSF009P14+ GTTGCTTGTGTACAGGCAAAAGGACGACCTTCTTGTGGAGGAGGAAGTGGTGGTGGA-GG
JMFN006E04- GTTGCTTGTGTACAGGCAAAAGGACGACCTTCTTGTGGAGGAGGAAGTGGTGGTGGA-GG
rJMFF001K24+ GTTGCTTGTGTACAGGCAAAAGGACGACCTTCTTGTGGAGGAGGAAGTGGTGGTGGAAGG
JMSF021N19- GTTGCTTGCGTACAGGCAAAAGGACGACCTTCTTGTGGAGGAGGAAGTGGTGGTGGA-GG
JMFN006J07- GTTGCTTGTGTACAGGCAAAAGGACGACCTTCTTGTGGAGGAGGAAGTGGTGGTGGA-GG
JMFF043A07- GTTGCTTGTGTACAGGCAAAAGGACGACCTTCTTGTGGAGGAGGAAGTGGTGGTGGA-GG
JMFF006N08- GTTGCTTGTGTACAGGCAAAAGGACGACCTTCTTGTGGAGGAGGAAGTGGTGGTGGA-GG
JMSF009P14- AAAAGGACGACCTTCTTGTGGAGGAGGAAGTGGTGGTGGA-GG
____________________________________________________________
consensus GTTGCTTGTGTACAGGCAAAAGGACGACCTTCTTGTGGAGGAGGAAGTGGTGGTGGA-GG

. : . : . : . : . : . :
rJMFF006N08+ TGGTTGAGTCCGACAAGCCGCCGCTCTGATGAAATCTCCGCCGCCGAGCACACTCCACAC
rJMSF009P14+ TGGTTGAGTCCGACAAGCCGCCGCTCTGATGAAATCTCCGCCGCCGAGCACACTCCACAC
JMFN006E04- TGGTTGAGTCCGACAAGCCGCCGCTCTGATGAAATCTCCGCCGCCGAGCACACTCCACAC
rJMFF001K24+ TGGTTGAGTCCNACAAGCCGCCGCTCTGATGAAATCTCCGCCGCCGAGCACACTCCACAC
JMSF021N19- TGGTTGAGTCCGACAAGCCGCCGCTCTGATGAAATCTCCGCCGCCGAGCACACTCCACAC
JMFN006J07- TGGTTGAGTCCGACAAGCCGCCGCTCTGATGAAATCTCCGCCGCCGAGCACACTCCACAC
JMFF043A07- TGGTTGAGTCCGACAAGCCGCCGCTCTGATGAAATCTCCGCCGCCGAGCACACTCCACAC
JMFF006N08- TGGTTGAGTCCGACAAGCCGCCGCTCTGATGAAATCTCCGCCGCCGAGCACACTCCACAC
JMFF001K24- C
JMSF009P14- TGGTTGAGTCCGACAAGCCGCCGCTCTGATGAAATCTCCGCCGCCGAGCACACTCCACAC
____________________________________________________________
consensus TGGTTGAGTCCGACAAGCCGCCGCTCTGATGAAATCTCCGCCGCCGAGCACACTCCACAC

. : . : . : . : . : . :
rJMFF006N08+ CGGGAAGCATGCCGGCCATGTCTCAGCAAATTGAATAAATTTTTGAAGGAATTAAGAAAT
rJMSF009P14+ CGGGAAGCATGCCGGCCATGTCTCAGCAAATTGAATAAATTTTTGAAGGAATTAAGAAAT
JMFN006E04- CGGGAAGCAT
rJMFF001K24+ CGGGAANCATGCCGGCCATGTCTCANCAAATTGAATAAATTTTTGAAGGAATTAANAAAT
JMSF021N19- CGGGAAGCATGCCGGCCATGTCTCAGCAAATTGAATAAATTTTTGAAGGAATTAAGAAAT
JMFN006J07- CGGGAAGCATGCCGGCCATGTCTCAGCAAATTGAATAAATTTTTGAAGGAATTAAGAAAT
JMFF043A07- CGGGAAGCATGCCGGCCATGTCTCAGCAAATTGAATAAATTTTTGAAGGAATTAAGAAAT
JMFF006N08- CGGGAAGCATGCCGGCCATGTCTCAGCAAATTGAATAAATTTTTGAAGGAATTAAGAAAT
JMFF001K24- CGGGAAGCATGCCGGCCATGTCTCAGCAAATTGAATAAATTTTTGAAGGAATTAAGAAAT
JMSF009P14- CGGGAAGCATGCCGGCCATGTCTCAGCAAATTGAATAAATTTTTGAAGGAATTAAGAAAT
____________________________________________________________
consensus CGGGAAGCATGCCGGCCATGTCTCAGCAAATTGAATAAATTTTTGAAGGAATTAAGAAAT

. : . : . : . : . : . :
rJMFF006N08+ CAAGATGTTACTGTGCATGAAGAGGCGCTTA
rJMSF009P14+ CAAGATGTTACTGTGCATGAAGA
rJMFF001K24+ CAANATGTTACTGTGCATGA
JMSF021N19- CAAGATGTTACTGTGCATGAAGAGGCGCTTAGAAGATGAGGGCAGCGAAGGAAAAT
JMFN006J07- CAAGATGTTACTGTGCATGAAGAGGCGCTTAGAAGAT
JMFF043A07- CAAGATGTTACTGTGCATGAAGAGGCGCTTAGAAGATGAGGGCAGCGAAGGAAAA
JMFF006N08- CAAGATGTTACTGTGCATGAAGAGGCGCTTAGAAGATGAGGGCAGCGAAGGAAAATGATA
JMFF001K24- CAAGATGTTACTGTGCATGAAGAGGCGCTTAGAAGATGAGGGCAGCGAAGGAAAAT
JMSF009P14- CAAGATGTTACTGTGCATGAAGAGGCGCTTAGAAGATGAGGGCAGCGAAGGAAAAT
____________________________________________________________
consensus CAAGATGTTACTGTGCATGAAGAGGCGCTTAGAAGATGAGGGCAGCGAAGGAAAATGATA

. : . : . : . : . : . :
JMFF006N08- GGAAAGGCGTGTTGTTAGGAGTTATATATATATAGAGAGAGTGTAAGAAATGTCTGGAAG
____________________________________________________________
consensus GGAAAGGCGTGTTGTTAGGAGTTATATATATATAGAGAGAGTGTAAGAAATGTCTGGAAG

. : . : . : . : . : . :
JMFF006N08- AGGGAAGCTTCTGTGAAAGTGAGTTTGTTGAT
____________________________________________________________
consensus AGGGAAGCTTCTGTGAAAGTGAGTTTGTTGAT