Alignment Contig 6884

                          .    :    .    :    .    :    .    :    .    :    .    :

rJMFF030P22+ ATGAAAATCAACGCTTTTTACTCTTTGCTTTCGTAATTCTTGATTTGCATAATTCATCCG
rJMSF007K19+ TTTTTCTCTTTGCTTTCGTAATTCTTGATTTGCATAATTCATCCG
____________________________________________________________
consensus ATGAAAATCAACGCTTTTTACTCTTTGCTTTCGTAATTCTTGATTTGCATAATTCATCCG

. : . : . : . : . : . :
rJMFF030P22+ GTGGTTTCCAGATCAGATCCTCAAGATTGCCACAGAAGTTCTTATAAAACTTGAGAAATT
rJMSF007K19+ GTGGTTTCCAGATCAGATCCTCAAGATTGCCACAGAAGTTCTTATAAAACTTGAGAAATT
____________________________________________________________
consensus GTGGTTTCCAGATCAGATCCTCAAGATTGCCACAGAAGTTCTTATAAAACTTGAGAAATT

. : . : . : . : . : . :
rJMFF030P22+ CAGTAGAATCTCCAGCAGCTTTCTGAATGTCCACCATGAAAAATGTTGGAGCTACTTGGA
rJMSF007K19+ CAGTAGAATCTCCAGCAGCTTTCTGAATGTCCACCATGAAAAATGTTGGAGCTACTTGGA
____________________________________________________________
consensus CAGTAGAATCTCCAGCAGCTTTCTGAATGTCCACCATGAAAAATGTTGGAGCTACTTGGA

. : . : . : . : . : . :
rJMFF030P22+ AAATCTCCAAAATTACGGAGAAGTGTGAGATCTTATCTGCAGATAGACCTTCCACCCTCA
rJMSF007K19+ AAATCTCCAAAATTACGGAGAAGTGTGAGATCTTATCTGCAGATAGACCTTCCACCCTCA
____________________________________________________________
consensus AAATCTCCAAAATTACGGAGAAGTGTGAGATCTTATCTGCAGATAGACCTTCCACCCTCA

. : . : . : . : . : . :
rJMFF030P22+ TCTTGTAGTTACGAATGTGTGTCTTGAACCCCATTGATTGGGCAACCACTTCCATAGTTG
rJMSF007K19+ TCTTGTAGTTACGAATGTGTGTCTTGAACCCCATTGATTGGGCAACCACTTCCATAGTTG
rJMSF012O10+ CCCCNTTGATTGGGCAACCACTTCCATAGTTG
rJMSF033B04+ TGTGTGTCTTGNNCCCCATTGATTGGGCAACCACTTCCATAGTTG
rJMSF015B14+ TGTGTGTCTTGAACCCCATTGATTGGGCAACCACTTCCATAGTTG
____________________________________________________________
consensus TCTTGTAGTTACGAATGTGTGTCTTGAACCCCATTGATTGGGCAACCACTTCCATAGTTG

. : . : . : . : . : . :
rJMFF030P22+ ATAAGGCAACCTTTGCGGGTTTTTGTGTAAGAAAGCGTGTCTGGTGCGTTGCAGAATCCT
rJMSF007K19+ ATAAGGCAACCTTTGCGGGTTTTTGTGTAAGAAAGCGTGTCTGGTGCGTTGCAGAATCCT
rJMSF012O10+ ATAAGGCAACCTTTGCGGGTTTTTGTGTAAGAAAGCGTGTCTGGTGCGTTGCAGAATCCT
rJMSF033B04+ ATAAGGCAACCTTTGCGGGTTTTTGTGTAAGAAAGCGTGTCTGGTGCGTTGCAGAATCCT
rJMSF015B14+ ATAAGGCAACCTTTGCGGGTTTTTGTGTAAGAAAGCGTGTCTGGTGCGTTGCAGAATCCT
____________________________________________________________
consensus ATAAGGCAACCTTTGCGGGTTTTTGTGTAAGAAAGCGTGTCTGGTGCGTTGCAGAATCCT

. : . : . : . : . : . :
rJMFF030P22+ GTCCACGATCAAACAAGACTGAAAGGTTTAATCCTTCAGAAAGGATGATTAGATCAAATG
rJMSF007K19+ GTCCACGATCAAACAAGACTGAAAGGTTTAATCCTTCAGAAAGGATGATTAGATCAAATG
rJMSF012O10+ GTCCACGATCAAACAAGACTGAAAGGTTTAATCCTTCAGAAAGGATGATTAGATCAAATG
rJMSF033B04+ GTCCACGATCAAACAAGACTGAAAGGTTTAATCCTTCAGAAAGGATGATTAGATCAAATG
rJMSF015B14+ GTCCACGATCAAACAAGACTGAAAGGTTTAATCCTTCAGAAAGGATGATTAGATCAAATG
____________________________________________________________
consensus GTCCACGATCAAACAAGACTGAAAGGTTTAATCCTTCAGAAAGGATGATTAGATCAAATG

. : . : . : . : . : . :
rJMFF030P22+ CATTAAGAGCTAGAGGCCCAAAATCCTCATTGTTGCATTGCTCATTTGGCACTTCTTCCT
rJMSF007K19+ CATTAAGAGCTAGAGGCCCAAAATCCTCATTGTTGCATTGCTCATTTGGCACTTCTTCCT
rJMSF012O10+ CATTAAGAGCTAGAGGCCCAAAATCCTCATTGTTGCATTGCTCATTTGGCACTTCTTCCT
rJMSF033B04+ CATTAAGAGCTAGAGGCCCAAAATCCTCATTGTTGCATTGCTCATTTGGCACTTCTTCCT
rJMSF015B14+ CATTAAGAGCTAGAGGCCCAAAATCCTCATTGTTGCATTGCTCATTTGGCACTTCTTCCT
____________________________________________________________
consensus CATTAAGAGCTAGAGGCCCAAAATCCTCATTGTTGCATTGCTCATTTGGCACTTCTTCCT

. : . : . : . : . : . :
rJMFF030P22+ CAGTATCATCAAAAGCTGCATTAATGTCATCTAAATTAACATCTTCATACTCTATGATCT
rJMSF007K19+ CAGTATCATCAAAAGCTGCATTAATGTCATCTAAATTAACATCTTCATACTCTATGATCT
rJMSF012O10+ CAGTATCATCAAAAGCTGCATTAATGTCATCTAAATTAACATCTTCATACTCTATGATCT
rJMSF033B04+ CAGTATCATCAAAAGCTGCATTAATGTCATCTAAATTAACATCTTCATACTCTATGATCT
rJMSF015B14+ CAGTATCATCAAAAGCTGCATTAATGTCATCTAAATTAACATCTTCATACTCTATGATCT
____________________________________________________________
consensus CAGTATCATCAAAAGCTGCATTAATGTCATCTAAATTAACATCTTCATACTCTATGATCT

. : . : . : . : . : . :
rJMFF030P22+ TCACAGGAATATAACCCTTCTTAAACCACTCATCATTCCTGATCTCTTCAATCCGAATGC
rJMSF007K19+ TCACAGGAATATAACCCTTCTTAAACCACTCATCATTCCTGATCTCTTCAATCCGAATGC
rJMSF012O10+ TCACAGGAATATAACCCTTCTTAAACCACTCATCATTCCTGATCTCTTCAATCCGAATGC
rJMSF033B04+ TCACAGGAATATAACCCTTCTTAAACCACTCATCATTCCTGATCTCTTCAATCCGAATGC
rJMSF015B14+ TCACAGGAATATAACCCTTCTTAAACCACTCATCATTCCTGATCTCTTCAATCCGAATGC
____________________________________________________________
consensus TCACAGGAATATAACCCTTCTTAAACCACTCATCATTCCTGATCTCTTCAATCCGAATGC

. : . : . : . : . : . :
rJMFF030P22+ GTGTCTCAGGGTTAGGGTCTAAAATTTTATGAATCAATGATTTTGCTCCCACTGGGAACC
rJMSF007K19+ GTGTCTCAGGGTTAGGGTCTAAAATTTTATGAATCAATGATTTTGCTCCCACTGGGAACC
rJMSF012O10+ GTGTCTCAGGGTTAGGGTCTAAAATTTTATGAATCAATGATTTTGCTCCCACTGGGAACC
rJMSF033B04+ GTGTCTCAGGGTTAGGGTCTAAAATTTTATGAATCAATGATTTTGCTCCCACTGGGAACC
rJMSF015B14+ GTGTCTCAGGGTTAGGGTCTAAAATTTTATGAATCAATGATTTTGCTCCCACTGGGAACC
____________________________________________________________
consensus GTGTCTCAGGGTTAGGGTCTAAAATTTTATGAATCAATGATTTTGCTCCCACTGGGAACC

. : . : . : . : . : . :
rJMFF030P22+ ATGATGGGCAAGAAAATTCTGCTCTCTCAATCTTGCCATACAATGTAGTG
rJMSF007K19+ ATGATGGGCAAGAAAATTCTGCTCTCTCAATCTTGCCATACAATGTAGTGAGATCAACCT
rJMSF012O10+ ATGATGGGCAAGAAAATTCTGCTCTCTCAATCTTGCCATACAATGTANTGAGATCAACCT
rJMSF033B04+ ATGATGGGCAAGAAAATTCTGCTCTCTCAATCTTGCCATACAATGTAGTGAGATCAACCT
rJMSF015B14+ ATGATGGGCAAGAAAATTCTGCTCTCTCAATCTTGCCATACAATGTAGTGAGATCAACCT
____________________________________________________________
consensus ATGATGGGCAAGAAAATTCTGCTCTCTCAATCTTGCCATACAATGTAGTGAGATCAACCT

. : . : . : . : . : . :
rJMSF007K19+ CATCAAATGGGAGATAGCCTGCCATTAGAACATAAAGGATGA
rJMSF012O10+ CATCAA
rJMSF033B04+ CATCAA
rJMSF015B14+ CATCAAATGGGAGATAGCCTGCCATTAGAACATAAAGGATGACACCACAGGACCAGACAT
____________________________________________________________
consensus CATCAAATGGGAGATAGCCTGCCATTAGAACATAAAGGATGACACCACAGGACCAGACAT

. : . : . : . : . : . :
rJMSF015B14+ CTGCCAG
____________________________________________________________
consensus CTGCCAG