Alignment Contig 6807

                          .    :    .    :    .    :    .    :    .    :    .    :

rJMFF010P18+ AATATATAAATGCAAATGGGTAATAAACAAACTGTGTTTAGAGACATCAAAAGTCAGGG-
rJMFF004G17+ AAATGCAAATGGGTAATAAACAAACTGTGTTTAGAGACATCAAAAGTCAGGG-
rJMSF025A16+ AAACTGTGTTTAGAGACATCAAAAGTCAGGG-
rJMSF028I24+ TTAGAGACATCAAAAGTCAGGGN
____________________________________________________________
consensus AATATATAAATGCAAATGGGTAATAAACAAACTGTGTTTAGAGACATCAAAAGTCAGGG-

. : . : . : . : . : . :
rJMFF010P18+ ATGCTACAAACGGACAAGGTAAAAGACGGTGAATACTGTTGTACTAGATCAGAAAATATA
rJMFF004G17+ ATGCTACAAACGGACAAGGTAAAAGACGGTGAATACTGTTGTACTAGATCAGAAAATATA
rJMSF025A16+ ATGCTACAAACGGACAAGGTAAAAGACGGTGAATACTGTTGTACTAGATCAGAAAATATA
rJMSF028I24+ ATGCTACAAACGGACAAGGTAAAAGACGGTGAATACTGTTGTACTAGATCAGAAAATATA
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consensus ATGCTACAAACGGACAAGGTAAAAGACGGTGAATACTGTTGTACTAGATCAGAAAATATA

. : . : . : . : . : . :
rJMFF010P18+ TGATATGCATAGTTTACTCGTAAAAACTGTCATTCCTGCAGGAAACCCAGAATCTGTAAT
rJMFF004G17+ TGATATGCATAGTTTACTCGTAAAAACTGTCATTCCTGCAGGAAACCCAGAATCTGTAAT
rJMSF025A16+ TGATATGCATAGTTTACTCGTAAAAACTGTCATTCCTGCAGGAAACCCAGAATCTGTAAT
rJMSF028I24+ TGATACGCATAGTTTACTCGTAAAAACTGTCATTCCTGCAGGAAACCCAGAATCTGTAAT
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consensus TGATATGCATAGTTTACTCGTAAAAACTGTCATTCCTGCAGGAAACCCAGAATCTGTAAT

. : . : . : . : . : . :
rJMFF010P18+ GTAATGGCGTATTCTCTGCAGGCATAAAAAAACGATACATGGGTCCACATGGAATGTGTT
rJMFF004G17+ GTAATGGCGTATTCTCTGCAGGCATAAAAAAACGATACATGGGTCCACATGGAATGTGTT
rJMSF025A16+ GTAATGGCGTATTCTCTGCAGGCATAAAAAAACGATACATGGGTCCACATGGAATGTGTT
rJMSF028I24+ GTAATGGCGTATTCTCTGCAGGCATAAAAAAACGATACATGGGTCCACATGGAATGTGTT
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consensus GTAATGGCGTATTCTCTGCAGGCATAAAAAAACGATACATGGGTCCACATGGAATGTGTT

. : . : . : . : . : . :
rJMFF010P18+ GGGGACCGAGCTCCCGAATCTTTGAGCCAAAATGGTAAATAAAAGTGGTTAAAGGCTCCA
rJMFF004G17+ GGGGACCGAGCTCCCGAATCTTTGAGCCAAAATGGTAAATAAAAGTGGTTAAAGGCTCCA
rJMSF025A16+ GGGGACCGAGCTCCCGAATCTTTGAGCCAAAATGGTAAATAAAAGTGGTTAAAGGCTCCA
rJMSF022E23+ TGGTTAAAGGCTCCA
rJMSF028I24+ GGGGACCGAGCTCCCGAATCTTTGAGCCAAAATGGTAAATAAAAGTGGTTAAAGGCTCCA
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consensus GGGGACCGAGCTCCCGAATCTTTGAGCCAAAATGGTAAATAAAAGTGGTTAAAGGCTCCA

. : . : . : . : . : . :
rJMFF010P18+ GCTAAAAATGATTCTGTTTGCCCCTCCATATTGCAGCAAAACGTGCCCAGATTTAGTTAT
rJMFF004G17+ GCTAAAAATGATTCTGTTTGCCCCTCCATATTGCAGCAAAACGTGCCCAGATTTAGTTAT
rJMSF025A16+ GCTAAAAATGATTCTGTTTGCCCCTCCATATTGCAGCAAAACGTGCCCAGATTTAGTTAT
rJMSF022E23+ GCTAAAAATGATTCTGTTTGCCCCTCCNTATTGCAGCANANCGTGCCCAGATTTAGTTNT
rJMSF028I24+ GCTAAAAATGATTCTGTTTGCCCCTCCATATTGCAGCAAAACGTGCCCAGATTTAGTTAT
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consensus GCTAAAAATGATTCTGTTTGCCCCTCCATATTGCAGCAAAACGTGCCCAGATTTAGTTAT

. : . : . : . : . : . :
rJMFF010P18+ ATCGGAGAGAATGGAATTTGTACAAATGTGTATAAAATGTAGAAAGCCAGCTTTATCAGA
rJMFF004G17+ ATCGGAGAGAATGGAATTTGTACAAATGTGTATAAACTGTAGAAAGCCAGCTTTATCAGA
rJMSF025A16+ ATCGGAGAGAATGGAATTTGTACAAATGTGTATAAACTGTAGAAAGCCAGCTTTATCAGA
rJMSF022E23+ ANCGGANAGAANGGAATTTGTACAANTGTGTATAAACTG
rJMSF028I24+ ATCGGAGAGAATGGAATTTGTACAAATGTGTATAAACTGTAGAAAGCCAGCTTTATCAGA
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consensus ATCGGAGAGAATGGAATTTGTACAAATGTGTATAAACTGTAGAAAGCCAGCTTTATCAGA

. : . : . : . : . : . :
rJMFF010P18+ ACCTGAATCAGCGGGCACCAATTTCTTACCGAAGAGTTAGTAGAGATCTATCTCCGGAGC
rJMFF004G17+ ACCTGAATCAGCGGGCACCAATTTCTTACCGAAGAGTTAGTAGAGATCTATCTCCGGAGC
rJMSF025A16+ ACCTGAATCAGCGGGCACCAATTTCTTACCGAAGAGTTAGTAGAGATCTATCTCCGGAGC
rJMSF028I24+ ACCTGAATCAGCGGGCACCANTTTCTTACCGAAGAGTTAGTAGAGATCTATCTCCGGAGC
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consensus ACCTGAATCAGCGGGCACCAATTTCTTACCGAAGAGTTAGTAGAGATCTATCTCCGGAGC

. : . : . : . : . : . :
rJMFF010P18+ ATAATCTTATGCTTCTCCAGACACTTATAAAACCTGGAAATCTTTTTTCTTCTTGCGGGT
rJMFF004G17+ ATAATCTTATGCTTCTCCAGACACTTATAAAACCTGGAAATCTTTTTTCTTCTTGCGGGT
rJMSF025A16+ ATAATCTTATGCTTCTCCAGACACTTATAAAACCTGGAAATCTTTTTTCTTCTTGCGGGT
rJMSF028I24+ ATAATCTTATGCTTCTCCAGACACTTATAAAACCTGGAAATCTTTTTTCTTCTTGCGGGT
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consensus ATAATCTTATGCTTCTCCAGACACTTATAAAACCTGGAAATCTTTTTTCTTCTTGCGGGT

. : . : . : . : . : . :
rJMFF010P18+ GATAGTAACATGCCTTCTTTTTTGCTCATTCCTTGGCTAAAGTCTGGTCTACTGGGTTGA
rJMFF004G17+ GATAGTAACATGCCTCCTTTTTTGCTCATTCCTTGGCTAAAGTCTGGTCTACTGGGTTGA
rJMSF025A16+ GATAGTAACATGCCTTCTTTTTTGCTCATTCCTTGGCTAAAGTCTGGTCTACTGGGTTGA
rJMSF028I24+ GATAGTAACATGCCTTCTTTTTTGCTCATTCCTTGGCTAAAGTCTGGTCTACTGGGTTGA
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consensus GATAGTAACATGCCTTCTTTTTTGCTCATTCCTTGGCTAAAGTCTGGTCTACTGGGTTGA

. : . : . : . : . : . :
rJMFF010P18+ TAAGCGCGGCCATTTCCATATTATCGGTTTTCGCTGAATCTTCGCCCTTCTTAGTTGGCA
rJMFF004G17+ TAAGCGCGGCCATTTCCATATTATCGGTTTTCGCTGAATCTTCGCCCTTCTTAGTTGGCA
rJMSF025A16+ TAAGCGCGGCCATTTCCATATTATCGGTTTTCGCTGAATCTTCGCCCTTCTTAGTTGGCA
rJMSF028I24+ TAAGCGCGGCCATTTCCATATTATCGGTTTTCGCTGAATCTTCGCCCTTCTTAGTTGGCA
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consensus TAAGCGCGGCCATTTCCATATTATCGGTTTTCGCTGAATCTTCGCCCTTCTTAGTTGGCA

. : . : . : . : . : . :
rJMFF010P18+ ACATTTCGGTTGGGAGAATGGAAGCGTTCGGGTCACTGCTGGGCACCAAAAACAAAAGCC
rJMFF004G17+ ACATTTCNGTTGGG
rJMSF025A16+ ACATTTCGGTTGGGAGAATGGAAGCGTTCGGGTCACTGCTGGGCACCAAAAACAAAAGCC
rJMSF028I24+ ACATTTCGGTTGGGAGAATGGAAGCGTTCGGGTC
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consensus ACATTTCGGTTGGGAGAATGGAAGCGTTCGGGTCACTGCTGGGCACCAAAAACAAAAGCC

. : . : . : . : . : . :
rJMFF010P18+ CTATCGGCAAGACTCTCAATAAACTCCTAATCACAATGACTGTCCCGANGNTGTCGAATT
rJMSF025A16+ CTATCGGCAAGACTCTCAATAAACTCCTAATCACAATGACTGTCCCGAGGTNGTCGAATN
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consensus CTATCGGCAAGACTCTCAATAAACTCCTAATCACAATGACTGTCCCGAGGTTGTCGAATT

. : . : . : . : . : . :
rJMFF010P18+ GTGTGCGTGTAACGTT
rJMSF025A16+ GTGTGCGTGTANCGTTNAAGA
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consensus GTGTGCGTGTAACGTTNAAGA