Alignment Contig 6747

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF050O21+ GGGGGATCAGACACGGAAACTACACACCAAAATCTTCACACACACTAACGTATATTGTGT
JMSF015C10+ GATCAGACACGGAAACTACACACCAAAATCTTCACACACACTAACGTATATTGTGT
JMFF004K21+ T
JMFF049I17+ T
JMFF027L14+ T
____________________________________________________________
consensus GGGGGATCAGACACGGAAACTACACACCAAAATCTTCACACACACTAACGTATATTGTGT

. : . : . : . : . : . :
JMSF050O21+ GTGTATATATGCATTCTCTATAGCGGCAGTCGTAGTATGAAGCAGCGTCGGAAATTTGAA
JMSF015C10+ GTGTATATATGCATTCTCTATAGCGGCAGTCGTAGTATGAAGCAGCGTCGGAAATTTGAA
JMFF004K21+ GTGTATATATGCATTCTCTATAGCGGCAGTCGTAGTATGAAGCAGCTTCGGAAATTTGAA
JMFF049I17+ GTGTATATATGCATTCTCTATAGCGGCAGTCGTAGTATGAAGCAGCGTCGGAAATTTGAA
JMFF027L14+ GTGTATATATGCATTCTCTATAGCGGCAGTCGTAGTATGAAGCAGCTTCGGAAATTTGAA
JMFF021J16+ ATGAAGCAGCGTCGGAAATTTGAA
JMFF048O09+ AAGCAGCGTCGGAAATTTGAA
____________________________________________________________
consensus GTGTATATATGCATTCTCTATAGCGGCAGTCGTAGTATGAAGCAGCGTCGGAAATTTGAA

. : . : . : . : . : . :
JMSF050O21+ ATCCGGGCGTGAACTGTGAAGTGTCTAACAATTCATCTTCTTTCTTCGTTTCTTGAGGGA
JMSF015C10+ ATCCGGGCGTGAACTGTGAAGTGTCTAACAATTCATCTTCTTTCTTCGTTTCTTGAGGGA
JMFF004K21+ ATCCGGGCGTGAACTGTGAAGTGTCTAACAATTCATCTTCTTTCTTCGTTTCTTGAGGGA
JMFF049I17+ ATCCGGGCGTGAACTGTGAAGTGTCTAACAATTCATCTTCTTTCTTCGTTTCTTGAGGGA
JMFF027L14+ ATCCGGGCGTGAACTGTGAAGTGTCTAACAATTCATCTTCTTTCTTCGTTTCTTGAGGGA
JMFF021J16+ ATCCGGGCGTGAACTGTGAAGTGTCTAACAATTCATCTTCTTTCTTCGTTTCTTGAGGGA
JMFF048O09+ ATCCGGGCGTGAACTGTGAAGTGTCTAACAATTCATCTTCTTTCTTCGTTTCTTGAGGGA
JMSF033M17+ GAACTGTGAAGTGTCTAACAATTCATCTTCTTTCTTCGTTTCTTGAGGGA
____________________________________________________________
consensus ATCCGGGCGTGAACTGTGAAGTGTCTAACAATTCATCTTCTTTCTTCGTTTCTTGAGGGA

. : . : . : . : . : . :
JMSF050O21+ TTTGGATTTGGGAATGGGGAGTTACAGAGTTTGTATGTGTTTCACGAGGAAGTTTAAGGT
JMSF015C10+ TTTGGATTTGGGAATGGGGAGTTACAGAGTTTGTATGTGTTTCACGA
JMFF004K21+ TTTGGATTTGGGAATGGGGAGTTACAGAGTTTGTATGTGTTTCACGAGGAAGTTTAAGGT
JMFF049I17+ TTTGGATTTGGGAATGGGGAGTTACAGAGTTTGTATGTGTTTCACGAGGAAGTTTAAGGT
JMFF027L14+ TTTGGATTTGGGAATGGGGAGTTACAGAGTTTGTATGTGTTTCACGAGGAAGTTTAAGGT
JMFF021J16+ TTTGGATTTGGGAATGGGGAGTTACAGAGTTTGTATGTGTTTCACGAGGAAGTTTAAGGT
JMFF048O09+ TTTGGATTTGGGAATGGGGAGTTACAGAGTTTGTATGTGTTTCACGAGGAAGTTTAAGGT
JMSF033M17+ TC--GATTTGGGAATGGGGAGTTACAGAGTTTGTATGTGTTTCACGAGGAAGTTTAAGGT
____________________________________________________________
consensus TTTGGATTTGGGAATGGGGAGTTACAGAGTTTGTATGTGTTTCACGAGGAAGTTTAAGGT

. : . : . : . : . : . :
JMSF050O21+ GACGGAGGCGCAGCCGGCGGCGGACGTGAAGGAGGCGTTCAAGAAGTATGCGGAGGAAGG
JMFF004K21+ GACGGAGGCGCAGCCGGCGGCGGACGTGAAGGAGGCGTTCAAGAAGTATGCGGAGGAAGG
JMFF049I17+ GACGGAGGCGCAGCCGGCGGCGGACGTGAAGGAGGCGTTCAAGAAGTATGCGGAGGAAGG
JMFF027L14+ GACGGAGGCGCAGCCGGCGGCGGACGTGAAGGAGGCGTTCAAGAAGTATGCGGAGGAAGG
JMFF021J16+ GACGGAGGCGCAGCCGGCGGCGGACGTGAAGGAGGCGTTCAAGAAGTATGCGGAGGAAGG
JMFF048O09+ GACGGAGGCGCAGCCGGCGGCGGACGTGAAGGAGGCGTTCAAGAAGTATGCGGAGGAAGG
JMSF033M17+ GACGGAGGCGCAGCCGGCGGCGGACGTGAAGGAGGCGTTCAAGAAGTATGCGGAGGAAGG
____________________________________________________________
consensus GACGGAGGCGCAGCCGGCGGCGGACGTGAAGGAGGCGTTCAAGAAGTATGCGGAGGAAGG

. : . : . : . : . : . :
JMSF050O21+ GAGCCAGATGAGCTCGGAGCAGCTGCTGCGCTTCATCACGGAGGAGCAGGGACAAAAGGA
JMFF004K21+ GAGCCAGATGAGCTCGGAGCAGCTGCTGCGCTTCCTCACGGAGGAGCAGGGACAAAAGGA
JMFF049I17+ GAGCCAGATGAGCTCGGAGCAGCTGCTGCGCTTCCTCACGGAGGAGCAGGGACAAAAGGA
JMFF027L14+ GAGCCAGATGAGCTCGGAGCAGCTGCTGCGCTTCCTCACGGAGGAGCAGGGACAAAAGGA
JMFF021J16+ GAGCCAGATGAGCTCGGAGCAGCTGCTGCGCTTCCTCACGGAGTAGCAGGGACAAAAGGA
JMFF048O09+ GAGCCAGATGAGCTCGGAGCAGCTGCTGCGCTTCCTCACGGAGGAGCAGGGACAAAAGGA
JMSF033M17+ GAGCCAGATGAGCTCGGAGCAGCTGCTGCGCTTCCTCACGGAGGAGCAGGGACAAAAGGA
____________________________________________________________
consensus GAGCCAGATGAGCTCGGAGCAGCTGCTGCGCTTCCTCACGGAGGAGCAGGGACAAAAGGA

. : . : . : . : . : . :
JMSF050O21+ AGCCACTCTCGCGGAGGCGGAAGCGATCGTGCAGCAGATCCTCCACAAACGCCACCCCAT
JMFF004K21+ AGCCACTCTCGCGGAGGCGGAAGCGATCGTGCANCAGATCCTCCACAAACGCCACCCCAT
JMFF049I17+ AGCCACTCTCGCGGAGGCGGAAGCGATCGTGCAGCAGATCCTCCACAAACGCCACCCCAT
JMFF027L14+ AGCCACTCTCGCGGAGGCGGAAGCGATCGTGCAGCAGATCCTCCACAAACGCCACCCCAT
JMFF021J16+ AGCCACTCTCGCGGAGGCGGAAGCGATCGTGCAGCAGATCCTCCACAAACGCCACCCCAT
JMFF048O09+ AGCCACTCTCGCGGAGGCGGAAGCGATCGTGCAGCAGATCCTCCACAAACGCCACCCCAT
JMSF033M17+ AGCCACTCTCGCGGAGGCGGAAGCGATCGTGCAGCAGATCCTCCACAAACGCCACCCCAT
____________________________________________________________
consensus AGCCACTCTCGCGGAGGCGGAAGCGATCGTGCAGCAGATCCTCCACAAACGCCACCCCAT

. : . : . : . : . : . :
JMSF050O21+ TTCCAAGTTAACTCGTCGCAATCTCGCTCTCGACGATTTCCACCATTTCCTCTTCAACGC
JMFF004K21+ TTCCA
JMFF049I17+ TTCCAAGTTAACTCGTCGCAATCTCGCTCTCGACGATTTCCACCATTTCCTCTTCAACGC
JMFF027L14+ TTCCAAGTTAACTCGTCGCAATCTCGCTCTCGACGATTTCCACCATTTCCTCTTCAACGC
JMFF021J16+ TTCCAAGTTAACTCGTCGCAATCTCGCTCTCGACGATTTCCACCATTTCCTCTTCAACGC
JMFF048O09+ TTCCAAGTTAACTCGTCGCAATCTCGCTCTCGACGATTTCCACCATTTCCTCTTCAACGC
JMSF033M17+ TTCCAAGTTAACTCGTCGCAATCTCGCTCTCGACGATTTCCACCATTTCCTCTTCAACGC
____________________________________________________________
consensus TTCCAAGTTAACTCGTCGCAATCTCGCTCTCGACGATTTCCACCATTTCCTCTTCAACGC

. : . : . : . : . : . :
JMSF050O21+ CGACCTCAACCCCCCAATCATTTCAAAGGTTCATCATGATATGACAGCTCCCTTATCCCA
JMFF049I17+ CGACCTCAACCCCCCAATCATTTCAAAGGTTCATCATGATATGACAGCTCCCTTATCCCA
JMFF027L14+ CGACCTCAACCCCCCAATCATTTCAAAGGTTCNTCATGATATGACAGCTCCCTTATCCCA
JMFF021J16+ CGACCTCAACCCCCCAATCATTTCAAAGGTTCATCATGATATGACAGCTCCCTTATCCCA
JMFF048O09+ CGACCTCAACCCCCCAATCATTTCAAAGGTTCATCATGATATGACAGCTCCCTTATCCCA
JMSF033M17+ CGACCTCAACCCCCCAATCATTTCAAAGGTTCATCATGATATGACAGCTCCCTTATCCCA
____________________________________________________________
consensus CGACCTCAACCCCCCAATCATTTCAAAGGTTCATCATGATATGACAGCTCCCTTATCCCA

. : . : . : . : . : . :
JMSF050O21+ TTATTATATATTCACTGGGCATAATTCGTACTTGACTGGAAATCAGCTGACAAGTGATTG
JMFF049I17+ TTATTATATATTCACTGGGCATAATTCGTACTTGACTGGAAATCAGCTGACAAGTGATTG
JMFF027L14+ TTATTATATATTCACTGGGCATAATTC
JMFF021J16+ TTATTATATATTCACTGGGCATAATTCGTACTTGACTGGAAATCAGCTGACAAGTGATTG
JMFF048O09+ TTATTATATATTCACTGGGCATAATTCGTACTTGACTGGAAATCAGCTGACAAGTGATTG
JMSF033M17+ TTATTATATATTCACTGGGCATAATTCGTACTTGACTGGAAATCAGCTGACAAGTGATTG
____________________________________________________________
consensus TTATTATATATTCACTGGGCATAATTCGTACTTGACTGGAAATCAGCTGACAAGTGATTG

. : . : . : . : . : . :
JMSF050O21+ CAGTGATGTTCCAATAATTAA
JMFF049I17+ CAG
JMFF021J16+ CAGTGATGTTCCAATAATTAAGGCACTGAAGAGAGGTGTAAGGGTTATAGAGCTTGATAT
JMFF048O09+ CAGTGATGTTCCAATAATTAAGGCACTGAAGAGAGGTGTAAGGGTTATAGAGCTTGATAT
JMSF033M17+ CAGTGATGTTCCAATAATTAAGGCACTGAAGAGAGGTGTAAGGGTTATAGAGCTTGATAT
____________________________________________________________
consensus CAGTGATGTTCCAATAATTAAGGCACTGAAGAGAGGTGTAAGGGTTATAGAGCTTGATAT

. : . : . : . : . : . :
JMFF021J16+ ATGGCC
JMFF048O09+ ATGGCCCAACTCAGCANAGGATGATGTGATTGTTCTTC
JMSF033M17+ ATGGCCAAACTCAGCAAAGGATGATGTGATTGTTCTTCATGGAAGGACAGTGACAACTCC
____________________________________________________________
consensus ATGGCCAAACTCAGCAAAGGATGATGTGATTGTTCTTCATGGAAGGACAGTGACAACTCC

. : . : . : . : . : . :
JMSF033M17+ TGTGGAACTCATAAAATGTCTGAAGTCAATAAAGGAGAATGCCTTTGTTGCCTCTCCCTA
____________________________________________________________
consensus TGTGGAACTCATAAAATGTCTGAAGTCAATAAAGGAGAATGCCTTTGTTGCCTCTCCCTA

. : . : . : . : . : . :
JMSF033M17+ CCCAGTTGTAATAACACTGGAAGA
____________________________________________________________
consensus CCCAGTTGTAATAACACTGGAAGA