Alignment Contig 6623

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF037B10+ TGTCGTGCTGCCGTGTGTAGACGTTTTTCTCTGTGTTGGCCAACCAAGTCTTTGTTCTTG
JMFF050I14+ ACCAAGTCTTTGTTCTTG
JMFF016C02+ ACCAAGTCTTTGTTCTTG
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consensus TGTCGTGCTGCCGTGTGTAGACGTTTTTCTCTGTGTTGGCCAACCAAGTCTTTGTTCTTG

. : . : . : . : . : . :
JMSF037B10+ ACTTGCAGCTGAGGAGGCTACTTTGGGCACTGAGTTTTCTCATAAATGATCAAAGACTGA
JMFF050I14+ ACTTGCAGCTGAGGAGGCTACTTTGGGCACTGAGTTTTCTCATAAATGATCAAAGACTGA
JMFF016C02+ ACTTGCAGCTGAGGAGGCTACTTTGGGCACTGAGTTTTCTCATAAATGATCAAAGACTGA
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consensus ACTTGCAGCTGAGGAGGCTACTTTGGGCACTGAGTTTTCTCATAAATGATCAAAGACTGA

. : . : . : . : . : . :
JMSF037B10+ ACCTTTATTTGATACTTGGTGAGTCCAGCTTGCCAGAAGTCAATCCTTCCTTGCATTCAG
JMFF050I14+ ACCTTTATTTGATACTTGGTGAGTCCAGCTTGCCAGAAGTCAATCCTTCCTTGCATTCAG
JMSF017J16+ ACTTGGTGAGTCCAGCTTGCCAGAAGTCAATCCTTCCTTGCATTCAG
JMFF016C02+ ACCTTTATTTGATACTTGGTGAGTCCAGCTTGCCAGAAGTCAATCCTTCCTTGCATTCAG
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consensus ACCTTTATTTGATACTTGGTGAGTCCAGCTTGCCAGAAGTCAATCCTTCCTTGCATTCAG

. : . : . : . : . : . :
JMSF037B10+ CTCTCAAGCACAAAGAATCTGTATTGACGGTACCCTGATTTATTGATGACCATGAGGTGT
JMFF050I14+ CTCTCAAGCACAAAGAATCTGTATTGACGGTACCCTGATTTATTGATGACCATGAGGTGT
JMSF017J16+ CTCTCAAGCACAAAGAATCTGTATTGACGGTACCCTGATTTATTGATGACCATGAGGTGT
JMFF016C02+ CTCTCAAGCACAAAGAATCTGTATTGACGGTACCCTGATTTATTGATGACCATGAGGTGT
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consensus CTCTCAAGCACAAAGAATCTGTATTGACGGTACCCTGATTTATTGATGACCATGAGGTGT

. : . : . : . : . : . :
JMSF037B10+ TTTCTATTCCACAATGATGAAAAGGATGAAGAACCAAAGATAGTGAAGTCAACTCCGGTC
JMFF050I14+ TTTCTATTCCACAATGATGAAAAGGATGAAGAACCAAAGATAGTGAAGTCAACTCCGGTC
JMSF017J16+ TTTCTATTCCACAATGATGAAAAGGATGAAGAACCAAAGATAGTGAAGTCAACTCCGGTC
JMFF016C02+ TTTCTATTCCACAATGATGAAAAGGATGAAGAACCAAAGATAGTGAAGTCAACTCCGGTC
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consensus TTTCTATTCCACAATGATGAAAAGGATGAAGAACCAAAGATAGTGAAGTCAACTCCGGTC

. : . : . : . : . : . :
JMSF037B10+ CTCTCATCCTGTTCTGGCTTTTCTGATCATGATGTGAAGCACTCTAATCTTGAATCCAGC
JMFF050I14+ CTCTCATCCTGTTCTGGCTTTTCTGATCATGATGTGAAGCACTCTAATCTTGAATCCAGC
JMSF017J16+ CTCTCATCCTGTTCTGGCTTTTCTGATCATGATGTGAAGCACTCTAATCTTGAATCCAGC
JMFF016C02+ CTCTCATCCTGTTCTGGCTTTTCTGATCATGATGTGAAGCACTCTAATCTTGAATCCAGC
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consensus CTCTCATCCTGTTCTGGCTTTTCTGATCATGATGTGAAGCACTCTAATCTTGAATCCAGC

. : . : . : . : . : . :
JMSF037B10+ TCTCAGAATGCATCAGATACTAGTACAGAGTCCAGGGGAAGGACTCAATTTCCAAGTATG
JMFF050I14+ TCTCAGAATGCATCAGATACTAGTACAGAGTCCAGGGGAAGGACTCAATTTCCAAGTATG
JMSF017J16+ TCTCAGAATGCATCAGATACTAGTACAGAGTCCAGGGGAAGGACTCAATTTCCAAGTATG
JMFF016C02+ TCTCAGAATGCATCAGATACTAGTACAGAGTCCAGGGGAAGGACTCAATTTCCAAGTATG
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consensus TCTCAGAATGCATCAGATACTAGTACAGAGTCCAGGGGAAGGACTCAATTTCCAAGTATG

. : . : . : . : . : . :
JMSF037B10+ AGTGAGAGGCCATCCAATCTAAGGGACTTTTCATTCTCAGAATTGAAATCAGCAACGAAA
JMFF050I14+ AGTGAGAGGCCATCCAATCTAAGGGACTTTTCATTCTCAGAATTGAAATCAGCAACGAAA
JMSF017J16+ AGTGAGAGGCCATCCAATCTAAGGGACTTTTCATTCTCAGAATTGAAATCAGCAACGAAA
JMFF016C02+ AGTGAGAGGCCATCCAATCTAAGGGACTTTTCATTCTCAGAATTGAAATCAGCAACGAAA
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consensus AGTGAGAGGCCATCCAATCTAAGGGACTTTTCATTCTCAGAATTGAAATCAGCAACGAAA

. : . : . : . : . : . :
JMSF037B10+ AATTTTAACCGTTCAACCAAGATTGGGGAGGG-AGGATTTGGGCCAGTGTATAAGGCAAC
JMFF050I14+ AATTTTAACCGTTCAACCAAGATTGGGGAGGG-AGGATTTGGGCCAGTGTATAAGGCAAC
JMSF017J16+ AATTTTAACCGTTCAACCAAGATTGGGGAGGG-AGGATTTGGGCCAGTGTATAAGGCAAC
JMFF016C02+ AATTTTAACCGTTCAACCAAGATTGGGGAGGGGAGGATTTGGGCCAGTGTATAAGGCAAC
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consensus AATTTTAACCGTTCAACCAAGATTGGGGAGGG-AGGATTTGGGCCAGTGTATAAGGCAAC

. : . : . : . : . : . :
JMSF037B10+ AATCAAGAATTCTGAAGATCCAGCTAGTAGAGTTGATGTGGCTGTAAAACAACTTAGTAG
JMFF050I14+ AATCAAGAATTCTGAAGATCCAGCTAGTAGAGTTGATGTGGCTGTAAAACAACTTAGTAG
JMSF017J16+ AATCAAGAATTCTGAAGATCCAGCTAGTAGAGTTGATGTGGCTGTAAAACAACTTAGTAG
JMFF016C02+ AATCAAGAATTCTGAAGATCCAGCTAGTAGAGTTGATGTGGCTGTAAAACAACTTAGTAG
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consensus AATCAAGAATTCTGAAGATCCAGCTAGTAGAGTTGATGTGGCTGTAAAACAACTTAGTAG

. : . : . : . : . : . :
JMSF037B10+ AAGAGGACTGCAGGGAC
JMFF050I14+ AAGAGGACTGCAGGGACACAGAGAATGGGTCACAGAAGTGAATGTCCTTGGC
JMSF017J16+ AAGAGGACTGCAGGGAC
JMFF016C02+ AAGAGGACTGCAGGGAC
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consensus AAGAGGACTGCAGGGACACAGAGAATGGGTCACAGAAGTGAATGTCCTTGGC